EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000015749 (Gene tree)
Gene ID: -
Gene Symbol: Synj1
Alias: A930006D20Rik
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Minus strand
Length: 75557 bases
Position: chrJH000016.1:3580736-3656292
Accession: 100757174
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000021712	Exo_endo_phos	PF03372.23	1.3e-14	1	1
ENSCGRP00000021711	Exo_endo_phos	PF03372.23	3e-07	1	1
ENSCGRP00000021712	DUF1866	PF08952.11	2.9e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000022015	-	7986	-	ENSCGRP00000021711	693 (aa)	-	-
ENSCGRT00000022016	-	3927	XM_007642008	ENSCGRP00000021712	1308 (aa)	XP_007640198	UPI00022F34F2

Gene Model

Click here to download ENSCGRG00000015749's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000015749's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000015749	Synj1	94	59.908	ENSCGRG00000001656	Synj2	88	52.885

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000015749	Synj1	100	96.825	ENSG00000159082	SYNJ1	100	96.067	Homo_sapiens
ENSCGRG00000015749	Synj1	100	82.878	ENSAPOG00000002809	synj1	92	70.908	Acanthochromis_polyacanthus
ENSCGRG00000015749	Synj1	100	95.150	ENSAMEG00000015028	SYNJ1	81	92.715	Ailuropoda_melanoleuca
ENSCGRG00000015749	Synj1	100	78.705	ENSACIG00000008857	synj1	98	66.767	Amphilophus_citrinellus
ENSCGRG00000015749	Synj1	100	82.302	ENSAOCG00000009835	synj1	98	68.085	Amphiprion_ocellaris
ENSCGRG00000015749	Synj1	100	82.302	ENSAPEG00000021010	synj1	73	67.957	Amphiprion_percula
ENSCGRG00000015749	Synj1	100	82.158	ENSATEG00000002306	synj1	73	68.062	Anabas_testudineus
ENSCGRG00000015749	Synj1	100	91.335	ENSAPLG00000011832	SYNJ1	83	84.697	Anas_platyrhynchos
ENSCGRG00000015749	Synj1	100	90.014	ENSACAG00000003006	-	100	82.864	Anolis_carolinensis
ENSCGRG00000015749	Synj1	100	96.537	ENSANAG00000027325	SYNJ1	100	92.683	Aotus_nancymaae
ENSCGRG00000015749	Synj1	100	82.014	ENSACLG00000002255	synj1	100	66.353	Astatotilapia_calliptera
ENSCGRG00000015749	Synj1	100	82.471	ENSAMXG00000008208	synj1	77	67.903	Astyanax_mexicanus
ENSCGRG00000015749	Synj1	100	96.681	ENSBTAG00000003063	SYNJ1	100	91.433	Bos_taurus
ENSCGRG00000015749	Synj1	100	96.825	ENSCJAG00000009187	SYNJ1	100	92.378	Callithrix_jacchus
ENSCGRG00000015749	Synj1	100	96.392	ENSCAFG00000009041	SYNJ1	99	86.937	Canis_familiaris
ENSCGRG00000015749	Synj1	100	96.825	ENSCAFG00020025776	SYNJ1	98	87.328	Canis_lupus_dingo
ENSCGRG00000015749	Synj1	100	96.825	ENSCHIG00000005095	SYNJ1	84	89.579	Capra_hircus
ENSCGRG00000015749	Synj1	100	96.681	ENSTSYG00000014541	SYNJ1	100	91.838	Carlito_syrichta
ENSCGRG00000015749	Synj1	89	87.241	ENSCAPG00000014483	SYNJ1	84	78.351	Cavia_aperea
ENSCGRG00000015749	Synj1	100	96.970	ENSCPOG00000012182	SYNJ1	100	93.059	Cavia_porcellus
ENSCGRG00000015749	Synj1	100	96.537	ENSCCAG00000020825	SYNJ1	100	92.302	Cebus_capucinus
ENSCGRG00000015749	Synj1	100	96.970	ENSCATG00000033891	SYNJ1	100	92.601	Cercocebus_atys
ENSCGRG00000015749	Synj1	100	96.681	ENSCLAG00000009796	SYNJ1	100	96.681	Chinchilla_lanigera
ENSCGRG00000015749	Synj1	100	95.292	ENSCSAG00000009654	SYNJ1	100	93.593	Chlorocebus_sabaeus
ENSCGRG00000015749	Synj1	83	97.872	ENSCHOG00000012390	SYNJ1	68	90.554	Choloepus_hoffmanni
ENSCGRG00000015749	Synj1	100	92.929	ENSCPBG00000006402	SYNJ1	97	86.974	Chrysemys_picta_bellii
ENSCGRG00000015749	Synj1	100	96.970	ENSCANG00000031359	SYNJ1	100	92.601	Colobus_angolensis_palliatus
ENSCGRG00000015749	Synj1	100	100.000	ENSCGRG00001010861	Synj1	100	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000015749	Synj1	100	80.797	ENSCSEG00000019614	synj1	99	67.730	Cynoglossus_semilaevis
ENSCGRG00000015749	Synj1	100	77.092	ENSCVAG00000019250	synj1	93	67.277	Cyprinodon_variegatus
ENSCGRG00000015749	Synj1	100	81.081	ENSDARG00000025011	synj1	100	68.394	Danio_rerio
ENSCGRG00000015749	Synj1	100	88.527	ENSDNOG00000010732	SYNJ1	83	88.711	Dasypus_novemcinctus
ENSCGRG00000015749	Synj1	100	96.681	ENSDORG00000014735	-	100	96.681	Dipodomys_ordii
ENSCGRG00000015749	Synj1	86	95.726	ENSETEG00000018674	SYNJ1	73	95.726	Echinops_telfairi
ENSCGRG00000015749	Synj1	100	97.403	ENSEASG00005006287	SYNJ1	98	93.451	Equus_asinus_asinus
ENSCGRG00000015749	Synj1	100	97.258	ENSECAG00000004829	SYNJ1	100	88.061	Equus_caballus
ENSCGRG00000015749	Synj1	83	97.872	ENSEEUG00000005150	SYNJ1	79	86.867	Erinaceus_europaeus
ENSCGRG00000015749	Synj1	100	81.007	ENSELUG00000009731	synj1	89	65.180	Esox_lucius
ENSCGRG00000015749	Synj1	100	96.681	ENSFCAG00000012498	SYNJ1	100	91.400	Felis_catus
ENSCGRG00000015749	Synj1	74	77.732	ENSFALG00000004680	SYNJ1	78	77.426	Ficedula_albicollis
ENSCGRG00000015749	Synj1	100	97.114	ENSFDAG00000016818	SYNJ1	100	97.114	Fukomys_damarensis
ENSCGRG00000015749	Synj1	100	80.797	ENSFHEG00000017689	synj1	76	67.463	Fundulus_heteroclitus
ENSCGRG00000015749	Synj1	93	78.659	ENSGMOG00000014852	synj1	77	72.130	Gadus_morhua
ENSCGRG00000015749	Synj1	100	92.641	ENSGALG00000034317	SYNJ1	82	79.667	Gallus_gallus
ENSCGRG00000015749	Synj1	100	82.446	ENSGAFG00000019466	synj1	74	68.090	Gambusia_affinis
ENSCGRG00000015749	Synj1	98	75.578	ENSGACG00000020575	synj1	89	65.277	Gasterosteus_aculeatus
ENSCGRG00000015749	Synj1	100	93.362	ENSGAGG00000022523	SYNJ1	100	84.887	Gopherus_agassizii
ENSCGRG00000015749	Synj1	100	96.825	ENSGGOG00000015945	SYNJ1	100	92.372	Gorilla_gorilla
ENSCGRG00000015749	Synj1	100	80.654	ENSHBUG00000007774	synj1	100	66.498	Haplochromis_burtoni
ENSCGRG00000015749	Synj1	100	97.114	ENSHGLG00000006420	SYNJ1	100	97.114	Heterocephalus_glaber_female
ENSCGRG00000015749	Synj1	100	97.114	ENSHGLG00100012591	SYNJ1	100	97.114	Heterocephalus_glaber_male
ENSCGRG00000015749	Synj1	100	76.691	ENSHCOG00000012774	synj1	86	71.454	Hippocampus_comes
ENSCGRG00000015749	Synj1	100	82.734	ENSIPUG00000010691	SYNJ1	83	69.598	Ictalurus_punctatus
ENSCGRG00000015749	Synj1	100	97.114	ENSSTOG00000015806	SYNJ1	100	94.737	Ictidomys_tridecemlineatus
ENSCGRG00000015749	Synj1	99	88.159	ENSJJAG00000020168	Synj1	82	88.159	Jaculus_jaculus
ENSCGRG00000015749	Synj1	100	81.727	ENSKMAG00000004221	synj1	96	71.186	Kryptolebias_marmoratus
ENSCGRG00000015749	Synj1	100	81.097	ENSLBEG00000015081	synj1	82	74.458	Labrus_bergylta
ENSCGRG00000015749	Synj1	100	85.977	ENSLACG00000005928	SYNJ1	82	76.780	Latimeria_chalumnae
ENSCGRG00000015749	Synj1	100	83.642	ENSLOCG00000009230	synj1	88	75.810	Lepisosteus_oculatus
ENSCGRG00000015749	Synj1	100	94.579	ENSLAFG00000011806	SYNJ1	83	91.325	Loxodonta_africana
ENSCGRG00000015749	Synj1	98	92.818	ENSMFAG00000018883	SYNJ1	99	93.470	Macaca_fascicularis
ENSCGRG00000015749	Synj1	100	95.720	ENSMMUG00000004624	SYNJ1	100	93.455	Macaca_mulatta
ENSCGRG00000015749	Synj1	100	96.970	ENSMNEG00000040077	SYNJ1	94	93.669	Macaca_nemestrina
ENSCGRG00000015749	Synj1	100	96.970	ENSMLEG00000037029	SYNJ1	100	92.601	Mandrillus_leucophaeus
ENSCGRG00000015749	Synj1	100	82.590	ENSMAMG00000013404	synj1	78	68.726	Mastacembelus_armatus
ENSCGRG00000015749	Synj1	100	82.014	ENSMZEG00005024358	synj1	100	66.305	Maylandia_zebra
ENSCGRG00000015749	Synj1	100	89.250	ENSMGAG00000014522	SYNJ1	83	83.661	Meleagris_gallopavo
ENSCGRG00000015749	Synj1	100	97.980	ENSMAUG00000009743	Synj1	100	97.980	Mesocricetus_auratus
ENSCGRG00000015749	Synj1	100	96.681	ENSMICG00000034953	SYNJ1	100	92.220	Microcebus_murinus
ENSCGRG00000015749	Synj1	100	80.993	ENSMMOG00000010203	synj1	96	67.232	Mola_mola
ENSCGRG00000015749	Synj1	100	85.307	ENSMODG00000021073	SYNJ1	100	79.939	Monodelphis_domestica
ENSCGRG00000015749	Synj1	100	82.158	ENSMALG00000014015	synj1	77	67.744	Monopterus_albus
ENSCGRG00000015749	Synj1	100	97.691	MGP_CAROLIEiJ_G0020951	Synj1	100	97.691	Mus_caroli
ENSCGRG00000015749	Synj1	100	98.124	ENSMUSG00000022973	Synj1	100	98.124	Mus_musculus
ENSCGRG00000015749	Synj1	100	98.124	MGP_PahariEiJ_G0016656	Synj1	100	98.124	Mus_pahari
ENSCGRG00000015749	Synj1	100	98.413	MGP_SPRETEiJ_G0021857	Synj1	100	98.413	Mus_spretus
ENSCGRG00000015749	Synj1	100	95.603	ENSMPUG00000001153	SYNJ1	83	92.601	Mustela_putorius_furo
ENSCGRG00000015749	Synj1	62	83.088	ENSMLUG00000005764	-	76	83.088	Myotis_lucifugus
ENSCGRG00000015749	Synj1	94	94.487	ENSMLUG00000026584	-	100	94.370	Myotis_lucifugus
ENSCGRG00000015749	Synj1	100	96.970	ENSNGAG00000000453	Synj1	100	96.970	Nannospalax_galili
ENSCGRG00000015749	Synj1	100	82.158	ENSNBRG00000011936	synj1	81	70.453	Neolamprologus_brichardi
ENSCGRG00000015749	Synj1	88	89.494	ENSNLEG00000003734	SYNJ1	100	88.061	Nomascus_leucogenys
ENSCGRG00000015749	Synj1	89	78.755	ENSMEUG00000004158	-	73	76.660	Notamacropus_eugenii
ENSCGRG00000015749	Synj1	100	89.729	ENSOPRG00000013602	SYNJ1	75	92.439	Ochotona_princeps
ENSCGRG00000015749	Synj1	100	97.114	ENSODEG00000002409	-	100	97.114	Octodon_degus
ENSCGRG00000015749	Synj1	100	81.081	ENSONIG00000004667	synj1	91	70.499	Oreochromis_niloticus
ENSCGRG00000015749	Synj1	94	91.071	ENSOANG00000006929	SYNJ1	83	84.681	Ornithorhynchus_anatinus
ENSCGRG00000015749	Synj1	100	95.007	ENSOCUG00000001420	SYNJ1	83	89.365	Oryctolagus_cuniculus
ENSCGRG00000015749	Synj1	100	81.439	ENSORLG00000004320	synj1	100	66.207	Oryzias_latipes
ENSCGRG00000015749	Synj1	100	77.952	ENSORLG00020011994	synj1	97	67.960	Oryzias_latipes_hni
ENSCGRG00000015749	Synj1	100	81.583	ENSORLG00015018077	synj1	77	66.154	Oryzias_latipes_hsok
ENSCGRG00000015749	Synj1	100	81.871	ENSOMEG00000014322	synj1	99	67.783	Oryzias_melastigma
ENSCGRG00000015749	Synj1	100	88.847	ENSOGAG00000006010	SYNJ1	81	88.847	Otolemur_garnettii
ENSCGRG00000015749	Synj1	100	95.177	ENSOARG00000013414	SYNJ1	81	91.159	Ovis_aries
ENSCGRG00000015749	Synj1	100	96.825	ENSPPAG00000026784	SYNJ1	100	92.677	Pan_paniscus
ENSCGRG00000015749	Synj1	100	96.825	ENSPPRG00000023469	SYNJ1	100	91.553	Panthera_pardus
ENSCGRG00000015749	Synj1	100	96.681	ENSPTIG00000007930	SYNJ1	100	91.476	Panthera_tigris_altaica
ENSCGRG00000015749	Synj1	100	96.825	ENSPTRG00000023787	SYNJ1	100	92.677	Pan_troglodytes
ENSCGRG00000015749	Synj1	100	96.825	ENSPTRG00000048135	-	100	88.737	Pan_troglodytes
ENSCGRG00000015749	Synj1	100	96.970	ENSPANG00000022531	SYNJ1	100	93.745	Papio_anubis
ENSCGRG00000015749	Synj1	100	83.022	ENSPKIG00000022603	synj1	95	75.500	Paramormyrops_kingsleyae
ENSCGRG00000015749	Synj1	100	82.014	ENSPMGG00000016831	synj1	90	67.124	Periophthalmus_magnuspinnatus
ENSCGRG00000015749	Synj1	100	98.124	ENSPEMG00000018767	Synj1	100	98.124	Peromyscus_maniculatus_bairdii
ENSCGRG00000015749	Synj1	100	64.266	ENSPMAG00000002887	synj1	96	53.359	Petromyzon_marinus
ENSCGRG00000015749	Synj1	100	91.486	ENSPCIG00000016372	SYNJ1	100	85.432	Phascolarctos_cinereus
ENSCGRG00000015749	Synj1	100	80.966	ENSPFOG00000016886	synj1	100	65.945	Poecilia_formosa
ENSCGRG00000015749	Synj1	100	81.871	ENSPLAG00000017559	synj1	100	64.103	Poecilia_latipinna
ENSCGRG00000015749	Synj1	100	81.727	ENSPMEG00000007643	synj1	79	67.290	Poecilia_mexicana
ENSCGRG00000015749	Synj1	100	82.158	ENSPREG00000012412	synj1	100	66.594	Poecilia_reticulata
ENSCGRG00000015749	Synj1	100	95.292	ENSPPYG00000011365	SYNJ1	94	93.288	Pongo_abelii
ENSCGRG00000015749	Synj1	83	91.429	ENSPCAG00000009906	SYNJ1	72	91.429	Procavia_capensis
ENSCGRG00000015749	Synj1	85	99.465	ENSPCOG00000024841	SYNJ1	95	89.109	Propithecus_coquereli
ENSCGRG00000015749	Synj1	100	94.864	ENSPVAG00000000892	SYNJ1	83	87.969	Pteropus_vampyrus
ENSCGRG00000015749	Synj1	100	82.014	ENSPNYG00000022989	synj1	100	65.784	Pundamilia_nyererei
ENSCGRG00000015749	Synj1	100	82.158	ENSPNAG00000021119	synj1	91	76.337	Pygocentrus_nattereri
ENSCGRG00000015749	Synj1	100	97.004	ENSRNOG00000002051	Synj1	100	95.576	Rattus_norvegicus
ENSCGRG00000015749	Synj1	100	96.970	ENSRBIG00000034477	SYNJ1	100	92.525	Rhinopithecus_bieti
ENSCGRG00000015749	Synj1	100	95.435	ENSRROG00000039256	SYNJ1	100	92.601	Rhinopithecus_roxellana
ENSCGRG00000015749	Synj1	100	96.970	ENSSBOG00000021001	SYNJ1	100	92.454	Saimiri_boliviensis_boliviensis
ENSCGRG00000015749	Synj1	100	91.053	ENSSHAG00000008538	SYNJ1	84	83.156	Sarcophilus_harrisii
ENSCGRG00000015749	Synj1	100	82.446	ENSSFOG00015006095	synj1	83	67.690	Scleropages_formosus
ENSCGRG00000015749	Synj1	100	81.727	ENSSMAG00000018066	synj1	95	65.746	Scophthalmus_maximus
ENSCGRG00000015749	Synj1	100	82.158	ENSSDUG00000013058	synj1	77	67.144	Seriola_dumerili
ENSCGRG00000015749	Synj1	100	81.727	ENSSLDG00000021406	synj1	100	66.351	Seriola_lalandi_dorsalis
ENSCGRG00000015749	Synj1	76	93.458	ENSSARG00000009490	SYNJ1	60	95.301	Sorex_araneus
ENSCGRG00000015749	Synj1	100	92.929	ENSSPUG00000012552	SYNJ1	82	80.503	Sphenodon_punctatus
ENSCGRG00000015749	Synj1	89	82.476	ENSSPAG00000006812	SYNJ1	72	67.763	Stegastes_partitus
ENSCGRG00000015749	Synj1	100	82.446	ENSSPAG00000017029	synj1	93	67.342	Stegastes_partitus
ENSCGRG00000015749	Synj1	100	96.970	ENSSSCG00000012035	SYNJ1	100	91.964	Sus_scrofa
ENSCGRG00000015749	Synj1	100	90.935	ENSTGUG00000013445	SYNJ1	83	83.384	Taeniopygia_guttata
ENSCGRG00000015749	Synj1	100	81.727	ENSTRUG00000006907	synj1	96	66.819	Takifugu_rubripes
ENSCGRG00000015749	Synj1	100	76.858	ENSTNIG00000009940	synj1	96	67.739	Tetraodon_nigroviridis
ENSCGRG00000015749	Synj1	92	98.396	ENSTBEG00000016298	SYNJ1	75	86.265	Tupaia_belangeri
ENSCGRG00000015749	Synj1	100	89.158	ENSTTRG00000002222	SYNJ1	83	81.665	Tursiops_truncatus
ENSCGRG00000015749	Synj1	100	96.825	ENSUAMG00000018606	SYNJ1	99	94.906	Ursus_americanus
ENSCGRG00000015749	Synj1	100	96.825	ENSUMAG00000018419	SYNJ1	99	94.906	Ursus_maritimus
ENSCGRG00000015749	Synj1	87	97.143	ENSVPAG00000001241	SYNJ1	70	97.143	Vicugna_pacos
ENSCGRG00000015749	Synj1	100	96.970	ENSVVUG00000023125	SYNJ1	100	93.053	Vulpes_vulpes
ENSCGRG00000015749	Synj1	100	84.844	ENSXETG00000009899	synj1	84	77.753	Xenopus_tropicalis
ENSCGRG00000015749	Synj1	100	80.939	ENSXCOG00000011896	synj1	99	68.981	Xiphophorus_couchianus
ENSCGRG00000015749	Synj1	100	80.654	ENSXMAG00000017524	synj1	100	69.294	Xiphophorus_maculatus