EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00000015840 (Gene tree)
Gene ID: -
Gene Symbol: Urb1
Alias: 4921511H13Rik|5730405K23Rik
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Minus strand
Length: 54579 bases
Position: chrJH000016.1:3407606-3462184
Accession: 100766838
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000021839	Npa1	PF11707.8	4.4e-85	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000022146	-	6642	XM_016975020	ENSCGRP00000021839	2213 (aa)	XP_016830509	-

Gene Model

Click here to download ENSCGRG00000015840's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000015840's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000015840	Urb1	99	77.051	ENSG00000142207	URB1	98	77.003	Homo_sapiens
ENSCGRG00000015840	Urb1	97	47.343	ENSAPOG00000020308	urb1	97	47.502	Acanthochromis_polyacanthus
ENSCGRG00000015840	Urb1	99	74.730	ENSAMEG00000011998	URB1	97	74.730	Ailuropoda_melanoleuca
ENSCGRG00000015840	Urb1	97	44.439	ENSACIG00000003248	urb1	96	44.578	Amphilophus_citrinellus
ENSCGRG00000015840	Urb1	99	40.409	ENSAOCG00000010364	urb1	98	40.498	Amphiprion_ocellaris
ENSCGRG00000015840	Urb1	97	52.155	ENSAPEG00000010758	urb1	97	52.155	Amphiprion_percula
ENSCGRG00000015840	Urb1	99	44.039	ENSATEG00000011790	urb1	96	44.039	Anabas_testudineus
ENSCGRG00000015840	Urb1	99	54.459	ENSAPLG00000012791	URB1	100	54.550	Anas_platyrhynchos
ENSCGRG00000015840	Urb1	99	52.512	ENSACAG00000002817	URB1	97	52.646	Anolis_carolinensis
ENSCGRG00000015840	Urb1	100	76.180	ENSANAG00000024617	URB1	98	76.180	Aotus_nancymaae
ENSCGRG00000015840	Urb1	99	44.929	ENSACLG00000024865	urb1	98	44.933	Astatotilapia_calliptera
ENSCGRG00000015840	Urb1	99	40.268	ENSAMXG00000012306	urb1	98	40.285	Astyanax_mexicanus
ENSCGRG00000015840	Urb1	99	71.480	ENSBTAG00000012412	URB1	98	71.493	Bos_taurus
ENSCGRG00000015840	Urb1	99	75.876	ENSCJAG00000009118	URB1	98	75.876	Callithrix_jacchus
ENSCGRG00000015840	Urb1	99	74.854	ENSCAFG00000008892	URB1	98	74.787	Canis_familiaris
ENSCGRG00000015840	Urb1	99	74.505	ENSCAFG00020025987	-	98	74.505	Canis_lupus_dingo
ENSCGRG00000015840	Urb1	99	73.995	ENSCAFG00020025994	-	98	73.950	Canis_lupus_dingo
ENSCGRG00000015840	Urb1	99	71.345	ENSCHIG00000015645	URB1	98	71.390	Capra_hircus
ENSCGRG00000015840	Urb1	100	77.058	ENSTSYG00000013286	URB1	98	77.127	Carlito_syrichta
ENSCGRG00000015840	Urb1	99	74.109	ENSCAPG00000015589	URB1	99	74.109	Cavia_aperea
ENSCGRG00000015840	Urb1	99	75.349	ENSCPOG00000006748	URB1	98	75.349	Cavia_porcellus
ENSCGRG00000015840	Urb1	99	76.283	ENSCCAG00000021299	URB1	98	76.283	Cebus_capucinus
ENSCGRG00000015840	Urb1	99	76.643	ENSCATG00000042630	URB1	98	76.643	Cercocebus_atys
ENSCGRG00000015840	Urb1	100	76.259	ENSCLAG00000005262	URB1	98	76.259	Chinchilla_lanigera
ENSCGRG00000015840	Urb1	99	75.269	ENSCSAG00000009584	URB1	98	75.269	Chlorocebus_sabaeus
ENSCGRG00000015840	Urb1	99	57.716	ENSCPBG00000006454	URB1	98	57.716	Chrysemys_picta_bellii
ENSCGRG00000015840	Urb1	99	76.508	ENSCANG00000031088	URB1	98	76.508	Colobus_angolensis_palliatus
ENSCGRG00000015840	Urb1	100	99.370	ENSCGRG00001010616	Urb1	98	99.370	Cricetulus_griseus_chok1gshd
ENSCGRG00000015840	Urb1	98	50.658	ENSCSEG00000012616	urb1	98	50.658	Cynoglossus_semilaevis
ENSCGRG00000015840	Urb1	99	44.779	ENSCVAG00000009076	urb1	98	51.663	Cyprinodon_variegatus
ENSCGRG00000015840	Urb1	98	50.658	ENSDARG00000060308	urb1	98	50.658	Danio_rerio
ENSCGRG00000015840	Urb1	85	74.669	ENSDNOG00000015586	URB1	97	74.669	Dasypus_novemcinctus
ENSCGRG00000015840	Urb1	100	75.315	ENSDORG00000006735	Urb1	98	75.315	Dipodomys_ordii
ENSCGRG00000015840	Urb1	92	76.295	ENSETEG00000009080	URB1	90	76.295	Echinops_telfairi
ENSCGRG00000015840	Urb1	99	74.279	ENSEASG00005007711	URB1	98	74.279	Equus_asinus_asinus
ENSCGRG00000015840	Urb1	97	82.809	ENSECAG00000013206	URB1	97	82.809	Equus_caballus
ENSCGRG00000015840	Urb1	57	82.353	ENSEEUG00000003626	-	55	82.353	Erinaceus_europaeus
ENSCGRG00000015840	Urb1	99	44.330	ENSELUG00000020516	urb1	97	44.599	Esox_lucius
ENSCGRG00000015840	Urb1	99	74.392	ENSFCAG00000002177	URB1	98	74.392	Felis_catus
ENSCGRG00000015840	Urb1	99	50.531	ENSFALG00000004636	URB1	99	50.619	Ficedula_albicollis
ENSCGRG00000015840	Urb1	99	75.910	ENSFDAG00000007288	URB1	93	75.910	Fukomys_damarensis
ENSCGRG00000015840	Urb1	98	41.818	ENSFHEG00000000202	urb1	99	42.089	Fundulus_heteroclitus
ENSCGRG00000015840	Urb1	93	46.709	ENSGMOG00000001838	urb1	92	46.709	Gadus_morhua
ENSCGRG00000015840	Urb1	99	55.481	ENSGALG00000015887	URB1	98	55.481	Gallus_gallus
ENSCGRG00000015840	Urb1	95	52.935	ENSGAFG00000020694	urb1	97	52.935	Gambusia_affinis
ENSCGRG00000015840	Urb1	99	44.030	ENSGACG00000011703	urb1	99	44.030	Gasterosteus_aculeatus
ENSCGRG00000015840	Urb1	99	57.264	ENSGAGG00000022544	URB1	98	57.264	Gopherus_agassizii
ENSCGRG00000015840	Urb1	99	77.093	ENSGGOG00000000285	URB1	98	77.093	Gorilla_gorilla
ENSCGRG00000015840	Urb1	99	44.969	ENSHBUG00000001904	urb1	98	44.973	Haplochromis_burtoni
ENSCGRG00000015840	Urb1	100	74.435	ENSHGLG00000004907	URB1	98	74.435	Heterocephalus_glaber_female
ENSCGRG00000015840	Urb1	100	74.989	ENSHGLG00100010749	URB1	98	74.989	Heterocephalus_glaber_male
ENSCGRG00000015840	Urb1	68	52.008	ENSHCOG00000018683	urb1	94	52.431	Hippocampus_comes
ENSCGRG00000015840	Urb1	99	40.408	ENSIPUG00000014721	urb1	98	40.407	Ictalurus_punctatus
ENSCGRG00000015840	Urb1	99	77.242	ENSSTOG00000004539	URB1	98	77.242	Ictidomys_tridecemlineatus
ENSCGRG00000015840	Urb1	93	47.335	ENSKMAG00000006001	urb1	97	47.255	Kryptolebias_marmoratus
ENSCGRG00000015840	Urb1	97	41.671	ENSLBEG00000027208	urb1	97	50.883	Labrus_bergylta
ENSCGRG00000015840	Urb1	99	48.238	ENSLACG00000017059	URB1	98	48.238	Latimeria_chalumnae
ENSCGRG00000015840	Urb1	99	44.612	ENSLOCG00000009190	urb1	98	44.612	Lepisosteus_oculatus
ENSCGRG00000015840	Urb1	100	71.839	ENSLAFG00000010407	URB1	98	71.839	Loxodonta_africana
ENSCGRG00000015840	Urb1	99	76.553	ENSMFAG00000034391	URB1	94	76.553	Macaca_fascicularis
ENSCGRG00000015840	Urb1	99	76.463	ENSMMUG00000010295	URB1	98	76.463	Macaca_mulatta
ENSCGRG00000015840	Urb1	99	75.079	ENSMNEG00000032981	URB1	98	75.079	Macaca_nemestrina
ENSCGRG00000015840	Urb1	99	76.688	ENSMLEG00000041435	URB1	98	76.688	Mandrillus_leucophaeus
ENSCGRG00000015840	Urb1	99	43.260	ENSMAMG00000011238	urb1	97	43.081	Mastacembelus_armatus
ENSCGRG00000015840	Urb1	99	42.096	ENSMZEG00005011862	urb1	98	42.103	Maylandia_zebra
ENSCGRG00000015840	Urb1	99	55.476	ENSMGAG00000014512	URB1	99	55.476	Meleagris_gallopavo
ENSCGRG00000015840	Urb1	93	88.897	ENSMAUG00000010516	Urb1	98	88.897	Mesocricetus_auratus
ENSCGRG00000015840	Urb1	99	75.946	ENSMICG00000016424	URB1	98	75.946	Microcebus_murinus
ENSCGRG00000015840	Urb1	99	87.387	ENSMOCG00000012613	Urb1	98	87.387	Microtus_ochrogaster
ENSCGRG00000015840	Urb1	99	61.290	ENSMODG00000021076	URB1	98	61.407	Monodelphis_domestica
ENSCGRG00000015840	Urb1	99	42.666	ENSMALG00000017411	urb1	97	51.864	Monopterus_albus
ENSCGRG00000015840	Urb1	100	85.380	MGP_CAROLIEiJ_G0020948	Urb1	98	85.380	Mus_caroli
ENSCGRG00000015840	Urb1	100	85.425	ENSMUSG00000039929	Urb1	98	85.425	Mus_musculus
ENSCGRG00000015840	Urb1	100	85.380	MGP_PahariEiJ_G0016653	Urb1	98	85.380	Mus_pahari
ENSCGRG00000015840	Urb1	100	85.515	MGP_SPRETEiJ_G0021854	Urb1	98	85.515	Mus_spretus
ENSCGRG00000015840	Urb1	100	73.786	ENSMPUG00000001123	URB1	98	73.786	Mustela_putorius_furo
ENSCGRG00000015840	Urb1	99	79.127	ENSNGAG00000001905	Urb1	98	79.127	Nannospalax_galili
ENSCGRG00000015840	Urb1	82	46.094	ENSNBRG00000001049	urb1	97	46.017	Neolamprologus_brichardi
ENSCGRG00000015840	Urb1	99	75.248	ENSNLEG00000026872	URB1	98	75.158	Nomascus_leucogenys
ENSCGRG00000015840	Urb1	96	57.162	ENSMEUG00000010828	URB1	94	57.096	Notamacropus_eugenii
ENSCGRG00000015840	Urb1	99	68.674	ENSOPRG00000013482	URB1	98	68.674	Ochotona_princeps
ENSCGRG00000015840	Urb1	100	75.135	ENSODEG00000002587	URB1	98	75.135	Octodon_degus
ENSCGRG00000015840	Urb1	99	45.398	ENSONIG00000005599	urb1	98	45.398	Oreochromis_niloticus
ENSCGRG00000015840	Urb1	99	74.212	ENSOCUG00000009381	URB1	97	74.212	Oryctolagus_cuniculus
ENSCGRG00000015840	Urb1	99	43.308	ENSORLG00000003429	urb1	98	43.308	Oryzias_latipes
ENSCGRG00000015840	Urb1	99	43.250	ENSORLG00020013785	urb1	99	42.721	Oryzias_latipes_hni
ENSCGRG00000015840	Urb1	95	46.456	ENSORLG00015019421	urb1	95	46.456	Oryzias_latipes_hsok
ENSCGRG00000015840	Urb1	77	50.782	ENSOMEG00000002094	urb1	97	50.782	Oryzias_melastigma
ENSCGRG00000015840	Urb1	99	75.890	ENSOGAG00000017140	URB1	98	75.890	Otolemur_garnettii
ENSCGRG00000015840	Urb1	96	72.623	ENSOARG00000013679	URB1	97	72.535	Ovis_aries
ENSCGRG00000015840	Urb1	99	77.138	ENSPPAG00000003423	URB1	98	77.138	Pan_paniscus
ENSCGRG00000015840	Urb1	99	74.910	ENSPPRG00000023131	URB1	98	74.910	Panthera_pardus
ENSCGRG00000015840	Urb1	92	74.009	ENSPTIG00000016125	URB1	96	74.009	Panthera_tigris_altaica
ENSCGRG00000015840	Urb1	99	77.003	ENSPTRG00000013852	URB1	98	77.003	Pan_troglodytes
ENSCGRG00000015840	Urb1	99	76.823	ENSPANG00000021964	URB1	98	76.823	Papio_anubis
ENSCGRG00000015840	Urb1	99	45.694	ENSPKIG00000003683	urb1	97	45.831	Paramormyrops_kingsleyae
ENSCGRG00000015840	Urb1	99	88.514	ENSPEMG00000021205	Urb1	97	88.514	Peromyscus_maniculatus_bairdii
ENSCGRG00000015840	Urb1	81	33.895	ENSPMAG00000009733	URB1	99	35.345	Petromyzon_marinus
ENSCGRG00000015840	Urb1	99	61.156	ENSPCIG00000016350	URB1	98	61.316	Phascolarctos_cinereus
ENSCGRG00000015840	Urb1	99	42.870	ENSPLAG00000004371	urb1	99	42.870	Poecilia_latipinna
ENSCGRG00000015840	Urb1	99	43.885	ENSPMEG00000006634	urb1	97	43.885	Poecilia_mexicana
ENSCGRG00000015840	Urb1	99	43.470	ENSPREG00000013453	urb1	98	43.470	Poecilia_reticulata
ENSCGRG00000015840	Urb1	99	76.285	ENSPPYG00000011359	URB1	98	76.238	Pongo_abelii
ENSCGRG00000015840	Urb1	99	62.511	ENSPCAG00000007430	URB1	98	62.826	Procavia_capensis
ENSCGRG00000015840	Urb1	99	76.791	ENSPCOG00000022695	URB1	98	76.791	Propithecus_coquereli
ENSCGRG00000015840	Urb1	99	73.108	ENSPVAG00000000889	URB1	98	73.108	Pteropus_vampyrus
ENSCGRG00000015840	Urb1	99	43.571	ENSPNYG00000010589	urb1	98	43.641	Pundamilia_nyererei
ENSCGRG00000015840	Urb1	99	39.457	ENSPNAG00000019324	urb1	98	39.591	Pygocentrus_nattereri
ENSCGRG00000015840	Urb1	100	85.656	ENSRNOG00000002080	Urb1	98	85.836	Rattus_norvegicus
ENSCGRG00000015840	Urb1	99	76.373	ENSRBIG00000033122	URB1	98	76.373	Rhinopithecus_bieti
ENSCGRG00000015840	Urb1	99	76.418	ENSRROG00000040237	URB1	98	76.418	Rhinopithecus_roxellana
ENSCGRG00000015840	Urb1	99	76.293	ENSSBOG00000027672	URB1	98	76.225	Saimiri_boliviensis_boliviensis
ENSCGRG00000015840	Urb1	99	61.056	ENSSHAG00000005140	URB1	98	61.056	Sarcophilus_harrisii
ENSCGRG00000015840	Urb1	93	45.101	ENSSFOG00015000339	urb1	97	45.171	Scleropages_formosus
ENSCGRG00000015840	Urb1	99	43.789	ENSSMAG00000003782	urb1	98	43.609	Scophthalmus_maximus
ENSCGRG00000015840	Urb1	99	44.775	ENSSDUG00000012313	urb1	98	44.775	Seriola_dumerili
ENSCGRG00000015840	Urb1	99	44.633	ENSSLDG00000023179	urb1	98	44.633	Seriola_lalandi_dorsalis
ENSCGRG00000015840	Urb1	99	54.736	ENSSPUG00000012447	URB1	98	54.736	Sphenodon_punctatus
ENSCGRG00000015840	Urb1	99	43.917	ENSSPAG00000006325	urb1	98	43.966	Stegastes_partitus
ENSCGRG00000015840	Urb1	99	72.584	ENSSSCG00000032024	URB1	98	72.584	Sus_scrofa
ENSCGRG00000015840	Urb1	75	56.981	ENSTGUG00000013442	URB1	100	56.921	Taeniopygia_guttata
ENSCGRG00000015840	Urb1	99	43.794	ENSTRUG00000009372	urb1	98	43.611	Takifugu_rubripes
ENSCGRG00000015840	Urb1	99	42.895	ENSTNIG00000016277	urb1	99	42.756	Tetraodon_nigroviridis
ENSCGRG00000015840	Urb1	80	78.261	ENSTBEG00000010044	URB1	79	78.261	Tupaia_belangeri
ENSCGRG00000015840	Urb1	92	73.931	ENSTTRG00000007712	URB1	92	74.348	Tursiops_truncatus
ENSCGRG00000015840	Urb1	99	74.414	ENSUAMG00000012231	URB1	97	74.414	Ursus_americanus
ENSCGRG00000015840	Urb1	93	75.661	ENSUMAG00000017419	URB1	97	75.761	Ursus_maritimus
ENSCGRG00000015840	Urb1	68	84.127	ENSVPAG00000001164	URB1	66	84.127	Vicugna_pacos
ENSCGRG00000015840	Urb1	99	74.617	ENSVVUG00000000551	URB1	98	74.617	Vulpes_vulpes
ENSCGRG00000015840	Urb1	99	49.559	ENSXETG00000009895	urb1	98	49.559	Xenopus_tropicalis
ENSCGRG00000015840	Urb1	99	41.402	ENSXCOG00000005500	urb1	96	45.574	Xiphophorus_couchianus
ENSCGRG00000015840	Urb1	99	41.558	ENSXMAG00000007253	urb1	96	45.796	Xiphophorus_maculatus