EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000015868 (Gene tree)
Gene ID: -
Gene Symbol: Pabpn1l
Alias: LOC382035|ePABP2
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 3027 bases
Position: chrJH000004.1:909063-912089
Accession: 100765187
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000021880	RRM_1	PF00076.22	3.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000022187	-	828	XM_003495089	ENSCGRP00000021880	275 (aa)	XP_003495137	A0A061ICB6

Gene Model

Click here to download ENSCGRG00000015868's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000015868's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000015868	Pabpn1l	51	56.849	ENSCGRG00000011102	Pabpn1	89	56.209

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000015868	Pabpn1l	100	72.760	ENSG00000205022	PABPN1L	100	72.760	Homo_sapiens
ENSCGRG00000015868	Pabpn1l	68	49.206	ENSAPOG00000000685	PABPN1L	64	50.000	Acanthochromis_polyacanthus
ENSCGRG00000015868	Pabpn1l	54	56.579	ENSACIG00000021400	PABPN1L	88	54.217	Amphilophus_citrinellus
ENSCGRG00000015868	Pabpn1l	64	46.591	ENSAOCG00000019844	PABPN1L	72	47.525	Amphiprion_ocellaris
ENSCGRG00000015868	Pabpn1l	64	46.591	ENSAPEG00000019534	PABPN1L	72	47.525	Amphiprion_percula
ENSCGRG00000015868	Pabpn1l	55	56.209	ENSATEG00000011646	PABPN1L	70	51.053	Anabas_testudineus
ENSCGRG00000015868	Pabpn1l	71	57.143	ENSACAG00000013250	PABPN1L	100	57.143	Anolis_carolinensis
ENSCGRG00000015868	Pabpn1l	100	70.397	ENSANAG00000038178	PABPN1L	100	70.397	Aotus_nancymaae
ENSCGRG00000015868	Pabpn1l	78	45.116	ENSACLG00000025147	PABPN1L	72	48.768	Astatotilapia_calliptera
ENSCGRG00000015868	Pabpn1l	58	53.750	ENSAMXG00000010873	PABPN1L	62	54.545	Astyanax_mexicanus
ENSCGRG00000015868	Pabpn1l	51	77.305	ENSBTAG00000006727	-	86	77.305	Bos_taurus
ENSCGRG00000015868	Pabpn1l	100	63.043	ENSBTAG00000023752	-	100	65.591	Bos_taurus
ENSCGRG00000015868	Pabpn1l	100	68.478	ENSCJAG00000045284	PABPN1L	100	70.397	Callithrix_jacchus
ENSCGRG00000015868	Pabpn1l	100	60.690	ENSCHIG00000013987	PABPN1L	100	60.690	Capra_hircus
ENSCGRG00000015868	Pabpn1l	95	66.171	ENSCAPG00000007240	PABPN1L	100	66.543	Cavia_aperea
ENSCGRG00000015868	Pabpn1l	100	68.727	ENSCPOG00000025951	PABPN1L	100	69.091	Cavia_porcellus
ENSCGRG00000015868	Pabpn1l	100	69.565	ENSCCAG00000027631	PABPN1L	100	70.758	Cebus_capucinus
ENSCGRG00000015868	Pabpn1l	100	72.000	ENSCATG00000031060	PABPN1L	100	73.913	Cercocebus_atys
ENSCGRG00000015868	Pabpn1l	100	70.909	ENSCLAG00000000704	PABPN1L	100	70.909	Chinchilla_lanigera
ENSCGRG00000015868	Pabpn1l	100	70.205	ENSCSAG00000002881	PABPN1L	100	70.205	Chlorocebus_sabaeus
ENSCGRG00000015868	Pabpn1l	71	54.592	ENSCPBG00000023441	PABPN1L	61	56.345	Chrysemys_picta_bellii
ENSCGRG00000015868	Pabpn1l	100	69.565	ENSCANG00000039336	PABPN1L	100	70.397	Colobus_angolensis_palliatus
ENSCGRG00000015868	Pabpn1l	100	100.000	ENSCGRG00001013211	Pabpn1l	100	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000015868	Pabpn1l	100	56.429	ENSDNOG00000034677	PABPN1L	100	59.286	Dasypus_novemcinctus
ENSCGRG00000015868	Pabpn1l	100	68.705	ENSEASG00005000777	PABPN1L	100	68.705	Equus_asinus_asinus
ENSCGRG00000015868	Pabpn1l	100	68.705	ENSECAG00000000378	PABPN1L	100	68.705	Equus_caballus
ENSCGRG00000015868	Pabpn1l	100	60.364	ENSEEUG00000004747	PABPN1L	100	60.364	Erinaceus_europaeus
ENSCGRG00000015868	Pabpn1l	54	57.432	ENSELUG00000018385	PABPN1L	67	50.802	Esox_lucius
ENSCGRG00000015868	Pabpn1l	100	68.100	ENSFCAG00000010465	PABPN1L	100	67.742	Felis_catus
ENSCGRG00000015868	Pabpn1l	75	54.106	ENSFALG00000003319	PABPN1L	81	53.623	Ficedula_albicollis
ENSCGRG00000015868	Pabpn1l	100	69.091	ENSFDAG00000021067	PABPN1L	100	69.091	Fukomys_damarensis
ENSCGRG00000015868	Pabpn1l	54	62.416	ENSGALG00000006242	PABPN1L	85	62.416	Gallus_gallus
ENSCGRG00000015868	Pabpn1l	65	54.444	ENSGAGG00000010613	PABPN1L	59	54.444	Gopherus_agassizii
ENSCGRG00000015868	Pabpn1l	100	72.000	ENSGGOG00000012670	PABPN1L	100	73.913	Gorilla_gorilla
ENSCGRG00000015868	Pabpn1l	78	45.116	ENSHBUG00000002388	PABPN1L	72	49.020	Haplochromis_burtoni
ENSCGRG00000015868	Pabpn1l	96	68.821	ENSHGLG00000014207	PABPN1L	100	69.582	Heterocephalus_glaber_female
ENSCGRG00000015868	Pabpn1l	96	68.821	ENSHGLG00100005230	PABPN1L	100	69.582	Heterocephalus_glaber_male
ENSCGRG00000015868	Pabpn1l	64	48.315	ENSHCOG00000004151	PABPN1L	69	49.029	Hippocampus_comes
ENSCGRG00000015868	Pabpn1l	100	68.817	ENSSTOG00000020814	PABPN1L	100	68.817	Ictidomys_tridecemlineatus
ENSCGRG00000015868	Pabpn1l	100	75.000	ENSJJAG00000006433	Pabpn1l	100	74.638	Jaculus_jaculus
ENSCGRG00000015868	Pabpn1l	64	47.727	ENSLBEG00000011647	PABPN1L	69	47.500	Labrus_bergylta
ENSCGRG00000015868	Pabpn1l	85	58.678	ENSLAFG00000025902	-	78	66.837	Loxodonta_africana
ENSCGRG00000015868	Pabpn1l	100	71.636	ENSMFAG00000002924	PABPN1L	100	73.551	Macaca_fascicularis
ENSCGRG00000015868	Pabpn1l	100	71.636	ENSMMUG00000012438	PABPN1L	100	73.551	Macaca_mulatta
ENSCGRG00000015868	Pabpn1l	100	71.636	ENSMNEG00000044808	PABPN1L	100	73.551	Macaca_nemestrina
ENSCGRG00000015868	Pabpn1l	100	71.273	ENSMLEG00000032667	PABPN1L	100	73.188	Mandrillus_leucophaeus
ENSCGRG00000015868	Pabpn1l	78	45.116	ENSMZEG00005002186	PABPN1L	72	48.768	Maylandia_zebra
ENSCGRG00000015868	Pabpn1l	100	90.182	ENSMAUG00000014032	Pabpn1l	100	92.395	Mesocricetus_auratus
ENSCGRG00000015868	Pabpn1l	100	70.545	ENSMICG00000028179	PABPN1L	100	70.545	Microcebus_murinus
ENSCGRG00000015868	Pabpn1l	100	85.091	ENSMOCG00000007955	Pabpn1l	100	85.091	Microtus_ochrogaster
ENSCGRG00000015868	Pabpn1l	100	55.556	ENSMODG00000003873	-	100	55.556	Monodelphis_domestica
ENSCGRG00000015868	Pabpn1l	78	45.327	ENSMALG00000016926	PABPN1L	72	48.544	Monopterus_albus
ENSCGRG00000015868	Pabpn1l	100	81.091	MGP_CAROLIEiJ_G0031670	Pabpn1l	100	80.727	Mus_caroli
ENSCGRG00000015868	Pabpn1l	100	80.000	ENSMUSG00000069867	Pabpn1l	100	77.818	Mus_musculus
ENSCGRG00000015868	Pabpn1l	100	80.364	MGP_PahariEiJ_G0023268	Pabpn1l	100	80.000	Mus_pahari
ENSCGRG00000015868	Pabpn1l	100	80.364	MGP_SPRETEiJ_G0032788	Pabpn1l	100	78.182	Mus_spretus
ENSCGRG00000015868	Pabpn1l	96	50.000	ENSMLUG00000003228	PABPN1L	95	50.000	Myotis_lucifugus
ENSCGRG00000015868	Pabpn1l	100	83.273	ENSNGAG00000023992	Pabpn1l	100	80.364	Nannospalax_galili
ENSCGRG00000015868	Pabpn1l	54	55.705	ENSNBRG00000017078	PABPN1L	73	50.794	Neolamprologus_brichardi
ENSCGRG00000015868	Pabpn1l	100	70.290	ENSOPRG00000005597	PABPN1L	100	70.290	Ochotona_princeps
ENSCGRG00000015868	Pabpn1l	100	62.500	ENSODEG00000004649	PABPN1L	100	62.153	Octodon_degus
ENSCGRG00000015868	Pabpn1l	100	54.930	ENSOANG00000013901	PABPN1L	100	56.159	Ornithorhynchus_anatinus
ENSCGRG00000015868	Pabpn1l	73	48.500	ENSORLG00000026560	PABPN1L	71	48.500	Oryzias_latipes
ENSCGRG00000015868	Pabpn1l	73	48.500	ENSORLG00020015068	PABPN1L	71	48.500	Oryzias_latipes_hni
ENSCGRG00000015868	Pabpn1l	73	48.500	ENSORLG00015000397	PABPN1L	71	48.500	Oryzias_latipes_hsok
ENSCGRG00000015868	Pabpn1l	100	69.818	ENSOGAG00000000433	PABPN1L	100	69.818	Otolemur_garnettii
ENSCGRG00000015868	Pabpn1l	100	62.623	ENSOARG00000013682	PABPN1L	100	63.607	Ovis_aries
ENSCGRG00000015868	Pabpn1l	100	73.118	ENSPPAG00000028866	PABPN1L	100	73.477	Pan_paniscus
ENSCGRG00000015868	Pabpn1l	100	67.384	ENSPPRG00000015106	PABPN1L	100	67.384	Panthera_pardus
ENSCGRG00000015868	Pabpn1l	93	61.868	ENSPTIG00000015606	PABPN1L	100	61.479	Panthera_tigris_altaica
ENSCGRG00000015868	Pabpn1l	100	73.118	ENSPTRG00000031120	PABPN1L	100	73.477	Pan_troglodytes
ENSCGRG00000015868	Pabpn1l	100	71.273	ENSPANG00000026039	PABPN1L	100	73.188	Papio_anubis
ENSCGRG00000015868	Pabpn1l	70	54.040	ENSPSIG00000003404	PABPN1L	100	55.721	Pelodiscus_sinensis
ENSCGRG00000015868	Pabpn1l	51	56.835	ENSPMGG00000013927	PABPN1L	73	57.895	Periophthalmus_magnuspinnatus
ENSCGRG00000015868	Pabpn1l	100	86.545	ENSPEMG00000016624	Pabpn1l	100	84.364	Peromyscus_maniculatus_bairdii
ENSCGRG00000015868	Pabpn1l	52	64.626	ENSPCIG00000007038	-	100	64.626	Phascolarctos_cinereus
ENSCGRG00000015868	Pabpn1l	100	70.504	ENSPPYG00000007655	PABPN1L	100	72.760	Pongo_abelii
ENSCGRG00000015868	Pabpn1l	100	72.364	ENSPCOG00000024077	PABPN1L	100	72.364	Propithecus_coquereli
ENSCGRG00000015868	Pabpn1l	100	67.021	ENSPVAG00000002716	PABPN1L	100	67.021	Pteropus_vampyrus
ENSCGRG00000015868	Pabpn1l	78	45.116	ENSPNYG00000004803	PABPN1L	72	48.768	Pundamilia_nyererei
ENSCGRG00000015868	Pabpn1l	100	82.182	ENSRNOG00000029558	Pabpn1l	100	80.364	Rattus_norvegicus
ENSCGRG00000015868	Pabpn1l	100	73.091	ENSRBIG00000030740	PABPN1L	100	75.000	Rhinopithecus_bieti
ENSCGRG00000015868	Pabpn1l	99	71.168	ENSRROG00000035483	-	99	73.091	Rhinopithecus_roxellana
ENSCGRG00000015868	Pabpn1l	100	73.188	ENSRROG00000032240	-	100	74.275	Rhinopithecus_roxellana
ENSCGRG00000015868	Pabpn1l	100	70.290	ENSSBOG00000018410	PABPN1L	100	70.758	Saimiri_boliviensis_boliviensis
ENSCGRG00000015868	Pabpn1l	100	51.568	ENSSHAG00000010001	-	100	51.568	Sarcophilus_harrisii
ENSCGRG00000015868	Pabpn1l	56	55.844	ENSSMAG00000021348	PABPN1L	73	48.768	Scophthalmus_maximus
ENSCGRG00000015868	Pabpn1l	64	47.159	ENSSDUG00000006986	PABPN1L	72	47.549	Seriola_dumerili
ENSCGRG00000015868	Pabpn1l	64	47.159	ENSSLDG00000021845	PABPN1L	72	47.549	Seriola_lalandi_dorsalis
ENSCGRG00000015868	Pabpn1l	94	50.965	ENSSARG00000005178	-	99	50.965	Sorex_araneus
ENSCGRG00000015868	Pabpn1l	70	56.477	ENSSPUG00000007031	PABPN1L	84	56.701	Sphenodon_punctatus
ENSCGRG00000015868	Pabpn1l	78	45.116	ENSSPAG00000017978	PABPN1L	72	47.264	Stegastes_partitus
ENSCGRG00000015868	Pabpn1l	100	69.149	ENSSSCG00000036367	PABPN1L	100	68.683	Sus_scrofa
ENSCGRG00000015868	Pabpn1l	64	46.154	ENSTRUG00000024725	PABPN1L	80	45.894	Takifugu_rubripes
ENSCGRG00000015868	Pabpn1l	100	65.827	ENSTTRG00000004691	PABPN1L	100	67.742	Tursiops_truncatus
ENSCGRG00000015868	Pabpn1l	54	53.459	ENSXETG00000011258	pabpn1l	89	50.732	Xenopus_tropicalis