EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000016696 (Gene tree)
Gene ID: -
Gene Symbol: Tnrc6b
Alias: 2700090M07Rik|A730065C02Rik|D230019K20Rik
Full Name: trinucleotide repeat containing 6B
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 178320 bases
Position: chrJH000810.1:341577-519896
Accession: 100771313
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000023056	Ago_hook	PF10427.9	4.8e-21	1	1
ENSCGRP00000023057	Ago_hook	PF10427.9	5.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000023375	-	10286	XM_007648051	ENSCGRP00000023057	1774 (aa)	XP_007646241	UPI0004547752
ENSCGRT00000023374	-	10225	-	ENSCGRP00000023056	1847 (aa)	-	-

Gene Model

Click here to download ENSCGRG00000016696's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000016696's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000016696	Tnrc6b	98	35.206	ENSCGRG00000018041	Tnrc6c	98	35.158
ENSCGRG00000016696	Tnrc6b	99	37.601	ENSCGRG00000013351	Tnrc6a	98	36.829

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000016696	Tnrc6b	99	92.316	ENSG00000100354	TNRC6B	100	95.401	Homo_sapiens
ENSCGRG00000016696	Tnrc6b	99	90.257	ENSAMEG00000011025	TNRC6B	100	90.189	Ailuropoda_melanoleuca
ENSCGRG00000016696	Tnrc6b	98	83.694	ENSAPLG00000009347	TNRC6B	100	83.865	Anas_platyrhynchos
ENSCGRG00000016696	Tnrc6b	99	72.961	ENSACAG00000007281	TNRC6B	99	73.202	Anolis_carolinensis
ENSCGRG00000016696	Tnrc6b	99	93.799	ENSANAG00000035042	TNRC6B	100	95.283	Aotus_nancymaae
ENSCGRG00000016696	Tnrc6b	52	47.474	ENSAMXG00000008707	tnrc6b	97	44.619	Astyanax_mexicanus
ENSCGRG00000016696	Tnrc6b	100	94.161	ENSBTAG00000021076	TNRC6B	99	94.350	Bos_taurus
ENSCGRG00000016696	Tnrc6b	98	94.951	ENSCJAG00000002732	TNRC6B	99	97.465	Callithrix_jacchus
ENSCGRG00000016696	Tnrc6b	99	92.147	ENSCAFG00000001255	TNRC6B	99	92.329	Canis_familiaris
ENSCGRG00000016696	Tnrc6b	99	94.904	ENSCAFG00020002189	TNRC6B	99	94.892	Canis_lupus_dingo
ENSCGRG00000016696	Tnrc6b	99	93.902	ENSCHIG00000003491	TNRC6B	100	94.543	Capra_hircus
ENSCGRG00000016696	Tnrc6b	99	93.994	ENSTSYG00000011836	TNRC6B	100	94.811	Carlito_syrichta
ENSCGRG00000016696	Tnrc6b	99	95.136	ENSCPOG00000005705	TNRC6B	100	95.207	Cavia_porcellus
ENSCGRG00000016696	Tnrc6b	98	94.091	ENSCCAG00000019912	TNRC6B	100	92.571	Cebus_capucinus
ENSCGRG00000016696	Tnrc6b	98	95.069	ENSCATG00000029291	TNRC6B	99	95.241	Cercocebus_atys
ENSCGRG00000016696	Tnrc6b	99	95.130	ENSCLAG00000016942	TNRC6B	100	95.477	Chinchilla_lanigera
ENSCGRG00000016696	Tnrc6b	99	91.304	ENSCSAG00000006021	TNRC6B	99	91.474	Chlorocebus_sabaeus
ENSCGRG00000016696	Tnrc6b	91	84.267	ENSCPBG00000022932	TNRC6B	99	84.327	Chrysemys_picta_bellii
ENSCGRG00000016696	Tnrc6b	98	94.897	ENSCANG00000030776	TNRC6B	100	94.817	Colobus_angolensis_palliatus
ENSCGRG00000016696	Tnrc6b	96	99.941	ENSCGRG00001020166	Tnrc6b	99	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000016696	Tnrc6b	100	93.662	ENSDNOG00000012744	TNRC6B	100	94.101	Dasypus_novemcinctus
ENSCGRG00000016696	Tnrc6b	99	96.002	ENSDORG00000003386	Tnrc6b	100	96.029	Dipodomys_ordii
ENSCGRG00000016696	Tnrc6b	99	83.164	ENSETEG00000006570	TNRC6B	99	83.672	Echinops_telfairi
ENSCGRG00000016696	Tnrc6b	99	95.243	ENSEASG00005005306	TNRC6B	100	94.870	Equus_asinus_asinus
ENSCGRG00000016696	Tnrc6b	99	95.424	ENSECAG00000009759	TNRC6B	100	95.487	Equus_caballus
ENSCGRG00000016696	Tnrc6b	57	95.614	ENSEEUG00000008690	-	59	94.872	Erinaceus_europaeus
ENSCGRG00000016696	Tnrc6b	99	94.980	ENSFCAG00000004791	TNRC6B	100	94.945	Felis_catus
ENSCGRG00000016696	Tnrc6b	95	86.631	ENSFALG00000012195	TNRC6B	100	86.572	Ficedula_albicollis
ENSCGRG00000016696	Tnrc6b	99	95.527	ENSFDAG00000021368	TNRC6B	100	95.532	Fukomys_damarensis
ENSCGRG00000016696	Tnrc6b	99	87.246	ENSGALG00000012050	TNRC6B	97	87.246	Gallus_gallus
ENSCGRG00000016696	Tnrc6b	99	86.543	ENSGAGG00000025188	TNRC6B	98	86.486	Gopherus_agassizii
ENSCGRG00000016696	Tnrc6b	99	94.596	ENSGGOG00000008444	TNRC6B	100	95.401	Gorilla_gorilla
ENSCGRG00000016696	Tnrc6b	99	95.478	ENSHGLG00000009306	TNRC6B	100	95.540	Heterocephalus_glaber_female
ENSCGRG00000016696	Tnrc6b	99	95.354	ENSHGLG00100018108	TNRC6B	100	95.530	Heterocephalus_glaber_male
ENSCGRG00000016696	Tnrc6b	80	44.409	ENSIPUG00000001515	tnrc6b	95	46.172	Ictalurus_punctatus
ENSCGRG00000016696	Tnrc6b	99	95.810	ENSSTOG00000008927	TNRC6B	100	95.974	Ictidomys_tridecemlineatus
ENSCGRG00000016696	Tnrc6b	99	95.805	ENSJJAG00000015779	Tnrc6b	100	95.638	Jaculus_jaculus
ENSCGRG00000016696	Tnrc6b	99	61.404	ENSLACG00000000628	-	99	62.259	Latimeria_chalumnae
ENSCGRG00000016696	Tnrc6b	77	93.682	ENSLAFG00000014473	TNRC6B	100	92.980	Loxodonta_africana
ENSCGRG00000016696	Tnrc6b	98	95.345	ENSMFAG00000003862	TNRC6B	99	95.356	Macaca_fascicularis
ENSCGRG00000016696	Tnrc6b	99	95.257	ENSMMUG00000021345	TNRC6B	100	95.171	Macaca_mulatta
ENSCGRG00000016696	Tnrc6b	98	95.287	ENSMNEG00000042745	TNRC6B	99	95.328	Macaca_nemestrina
ENSCGRG00000016696	Tnrc6b	98	95.183	ENSMLEG00000041780	TNRC6B	100	95.171	Mandrillus_leucophaeus
ENSCGRG00000016696	Tnrc6b	99	83.460	ENSMGAG00000012333	TNRC6B	99	81.922	Meleagris_gallopavo
ENSCGRG00000016696	Tnrc6b	100	98.703	ENSMAUG00000016123	Tnrc6b	100	97.790	Mesocricetus_auratus
ENSCGRG00000016696	Tnrc6b	98	94.815	ENSMICG00000014056	TNRC6B	100	94.582	Microcebus_murinus
ENSCGRG00000016696	Tnrc6b	96	98.000	ENSMOCG00000020334	Tnrc6b	100	98.000	Microtus_ochrogaster
ENSCGRG00000016696	Tnrc6b	99	97.408	MGP_CAROLIEiJ_G0020043	Tnrc6b	100	97.406	Mus_caroli
ENSCGRG00000016696	Tnrc6b	99	97.465	ENSMUSG00000047888	Tnrc6b	100	97.461	Mus_musculus
ENSCGRG00000016696	Tnrc6b	99	97.183	MGP_PahariEiJ_G0020045	Tnrc6b	100	97.185	Mus_pahari
ENSCGRG00000016696	Tnrc6b	99	97.690	MGP_SPRETEiJ_G0020941	Tnrc6b	100	97.682	Mus_spretus
ENSCGRG00000016696	Tnrc6b	97	96.388	ENSMPUG00000016442	TNRC6B	96	96.381	Mustela_putorius_furo
ENSCGRG00000016696	Tnrc6b	99	89.918	ENSMLUG00000008765	TNRC6B	99	89.770	Myotis_lucifugus
ENSCGRG00000016696	Tnrc6b	99	95.894	ENSNGAG00000021294	Tnrc6b	100	95.868	Nannospalax_galili
ENSCGRG00000016696	Tnrc6b	88	93.455	ENSNLEG00000015311	TNRC6B	100	95.755	Nomascus_leucogenys
ENSCGRG00000016696	Tnrc6b	90	92.174	ENSOPRG00000012054	TNRC6B	88	92.174	Ochotona_princeps
ENSCGRG00000016696	Tnrc6b	99	95.529	ENSODEG00000013146	TNRC6B	100	95.921	Octodon_degus
ENSCGRG00000016696	Tnrc6b	99	94.802	ENSOCUG00000016128	TNRC6B	100	94.662	Oryctolagus_cuniculus
ENSCGRG00000016696	Tnrc6b	99	90.700	ENSOGAG00000011096	TNRC6B	99	90.279	Otolemur_garnettii
ENSCGRG00000016696	Tnrc6b	99	94.038	ENSOARG00000017238	TNRC6B	100	94.192	Ovis_aries
ENSCGRG00000016696	Tnrc6b	98	95.572	ENSPPAG00000028514	TNRC6B	100	95.750	Pan_paniscus
ENSCGRG00000016696	Tnrc6b	99	91.864	ENSPPRG00000017741	TNRC6B	100	95.176	Panthera_pardus
ENSCGRG00000016696	Tnrc6b	99	87.042	ENSPTIG00000022064	TNRC6B	99	88.706	Panthera_tigris_altaica
ENSCGRG00000016696	Tnrc6b	98	94.809	ENSPTRG00000047826	TNRC6B	100	95.401	Pan_troglodytes
ENSCGRG00000016696	Tnrc6b	98	86.575	ENSPANG00000009271	TNRC6B	99	89.600	Papio_anubis
ENSCGRG00000016696	Tnrc6b	99	86.599	ENSPSIG00000005318	TNRC6B	99	86.599	Pelodiscus_sinensis
ENSCGRG00000016696	Tnrc6b	99	97.693	ENSPEMG00000011403	Tnrc6b	100	97.740	Peromyscus_maniculatus_bairdii
ENSCGRG00000016696	Tnrc6b	98	85.804	ENSPCIG00000020347	TNRC6B	99	86.087	Phascolarctos_cinereus
ENSCGRG00000016696	Tnrc6b	69	45.927	ENSPFOG00000006033	-	95	42.112	Poecilia_formosa
ENSCGRG00000016696	Tnrc6b	99	92.203	ENSPPYG00000011849	TNRC6B	99	92.542	Pongo_abelii
ENSCGRG00000016696	Tnrc6b	72	92.197	ENSPCAG00000008739	TNRC6B	76	88.828	Procavia_capensis
ENSCGRG00000016696	Tnrc6b	99	94.365	ENSPCOG00000020790	TNRC6B	100	95.053	Propithecus_coquereli
ENSCGRG00000016696	Tnrc6b	92	94.186	ENSPVAG00000004975	TNRC6B	94	94.275	Pteropus_vampyrus
ENSCGRG00000016696	Tnrc6b	66	48.446	ENSPNAG00000011713	tnrc6b	79	44.306	Pygocentrus_nattereri
ENSCGRG00000016696	Tnrc6b	99	96.859	ENSRNOG00000024907	Tnrc6b	100	96.813	Rattus_norvegicus
ENSCGRG00000016696	Tnrc6b	97	94.931	ENSRBIG00000035576	TNRC6B	100	94.935	Rhinopithecus_bieti
ENSCGRG00000016696	Tnrc6b	98	94.986	ENSRROG00000031135	TNRC6B	100	94.935	Rhinopithecus_roxellana
ENSCGRG00000016696	Tnrc6b	98	92.080	ENSSBOG00000029743	TNRC6B	100	95.283	Saimiri_boliviensis_boliviensis
ENSCGRG00000016696	Tnrc6b	99	81.308	ENSSHAG00000009692	TNRC6B	99	80.358	Sarcophilus_harrisii
ENSCGRG00000016696	Tnrc6b	66	84.746	ENSSARG00000007971	-	70	84.746	Sorex_araneus
ENSCGRG00000016696	Tnrc6b	91	82.028	ENSSPUG00000010801	TNRC6B	100	81.587	Sphenodon_punctatus
ENSCGRG00000016696	Tnrc6b	99	94.633	ENSSSCG00000000078	TNRC6B	99	94.802	Sus_scrofa
ENSCGRG00000016696	Tnrc6b	93	83.293	ENSTGUG00000010138	-	99	83.172	Taeniopygia_guttata
ENSCGRG00000016696	Tnrc6b	99	88.870	ENSTTRG00000011465	TNRC6B	100	89.213	Tursiops_truncatus
ENSCGRG00000016696	Tnrc6b	99	93.771	ENSUAMG00000007174	TNRC6B	100	93.436	Ursus_americanus
ENSCGRG00000016696	Tnrc6b	98	94.869	ENSUMAG00000014336	TNRC6B	100	94.749	Ursus_maritimus
ENSCGRG00000016696	Tnrc6b	68	89.516	ENSVPAG00000001467	TNRC6B	75	88.306	Vicugna_pacos
ENSCGRG00000016696	Tnrc6b	99	95.085	ENSVVUG00000007064	TNRC6B	100	95.209	Vulpes_vulpes