EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00000016893 (Gene tree)
Gene ID: -
Gene Symbol: Tarbp1
Alias: Gm17296
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 49281 bases
Position: chrJH000057.1:548880-598160
Accession: 100770970
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000023327	SpoU_methylase	PF00588.19	9.3e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000023648	-	4398	XM_003496827	ENSCGRP00000023327	1465 (aa)	XP_003496875	-

Gene Model

Click here to download ENSCGRG00000016893's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000016893's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000016893	Tarbp1	99	77.320	ENSG00000059588	TARBP1	98	76.780	Homo_sapiens
ENSCGRG00000016893	Tarbp1	94	44.366	ENSAPOG00000016419	si:dkey-85a20.4	85	44.366	Acanthochromis_polyacanthus
ENSCGRG00000016893	Tarbp1	93	77.900	ENSAMEG00000003359	TARBP1	99	77.900	Ailuropoda_melanoleuca
ENSCGRG00000016893	Tarbp1	92	44.724	ENSATEG00000020266	si:dkey-85a20.4	85	44.546	Anabas_testudineus
ENSCGRG00000016893	Tarbp1	92	62.930	ENSAPLG00000007666	TARBP1	99	63.588	Anas_platyrhynchos
ENSCGRG00000016893	Tarbp1	91	59.067	ENSACAG00000001142	TARBP1	88	58.092	Anolis_carolinensis
ENSCGRG00000016893	Tarbp1	95	74.608	ENSANAG00000022031	TARBP1	93	72.418	Aotus_nancymaae
ENSCGRG00000016893	Tarbp1	99	75.069	ENSBTAG00000004517	TARBP1	91	77.344	Bos_taurus
ENSCGRG00000016893	Tarbp1	99	75.925	ENSCJAG00000018155	TARBP1	92	75.275	Callithrix_jacchus
ENSCGRG00000016893	Tarbp1	96	75.367	ENSCAFG00000011533	TARBP1	99	75.957	Canis_familiaris
ENSCGRG00000016893	Tarbp1	95	75.921	ENSCAFG00020027141	TARBP1	90	74.253	Canis_lupus_dingo
ENSCGRG00000016893	Tarbp1	98	74.100	ENSCHIG00000011437	TARBP1	90	73.850	Capra_hircus
ENSCGRG00000016893	Tarbp1	89	77.931	ENSTSYG00000010382	TARBP1	96	77.931	Carlito_syrichta
ENSCGRG00000016893	Tarbp1	86	69.835	ENSCAPG00000010831	TARBP1	99	69.992	Cavia_aperea
ENSCGRG00000016893	Tarbp1	96	77.308	ENSCPOG00000013995	TARBP1	91	75.869	Cavia_porcellus
ENSCGRG00000016893	Tarbp1	97	76.762	ENSCCAG00000037278	TARBP1	90	76.099	Cebus_capucinus
ENSCGRG00000016893	Tarbp1	99	76.622	ENSCATG00000011754	TARBP1	91	76.088	Cercocebus_atys
ENSCGRG00000016893	Tarbp1	89	79.540	ENSCLAG00000003655	TARBP1	96	79.693	Chinchilla_lanigera
ENSCGRG00000016893	Tarbp1	87	78.142	ENSCSAG00000010100	TARBP1	99	78.142	Chlorocebus_sabaeus
ENSCGRG00000016893	Tarbp1	92	62.364	ENSCPBG00000005587	TARBP1	91	62.872	Chrysemys_picta_bellii
ENSCGRG00000016893	Tarbp1	92	78.197	ENSCANG00000034343	TARBP1	99	78.197	Colobus_angolensis_palliatus
ENSCGRG00000016893	Tarbp1	100	99.582	ENSCGRG00001016690	Tarbp1	99	99.582	Cricetulus_griseus_chok1gshd
ENSCGRG00000016893	Tarbp1	94	42.117	ENSCSEG00000005255	si:dkey-85a20.4	86	45.949	Cynoglossus_semilaevis
ENSCGRG00000016893	Tarbp1	95	45.872	ENSDARG00000079055	si:dkey-85a20.4	99	55.403	Danio_rerio
ENSCGRG00000016893	Tarbp1	98	74.470	ENSDNOG00000008637	TARBP1	89	74.069	Dasypus_novemcinctus
ENSCGRG00000016893	Tarbp1	88	74.672	ENSDORG00000007984	Tarbp1	100	74.981	Dipodomys_ordii
ENSCGRG00000016893	Tarbp1	98	76.907	ENSEASG00005000252	TARBP1	90	77.755	Equus_asinus_asinus
ENSCGRG00000016893	Tarbp1	98	77.172	ENSECAG00000023673	TARBP1	89	77.008	Equus_caballus
ENSCGRG00000016893	Tarbp1	91	44.644	ENSELUG00000012193	si:dkey-85a20.4	84	44.644	Esox_lucius
ENSCGRG00000016893	Tarbp1	95	73.654	ENSFCAG00000014183	TARBP1	89	72.684	Felis_catus
ENSCGRG00000016893	Tarbp1	89	63.154	ENSFALG00000013565	TARBP1	99	63.560	Ficedula_albicollis
ENSCGRG00000016893	Tarbp1	87	75.979	ENSFDAG00000001308	TARBP1	99	76.132	Fukomys_damarensis
ENSCGRG00000016893	Tarbp1	94	39.347	ENSFHEG00000007565	si:dkey-85a20.4	80	53.333	Fundulus_heteroclitus
ENSCGRG00000016893	Tarbp1	92	43.208	ENSGMOG00000004549	si:dkey-85a20.4	98	43.280	Gadus_morhua
ENSCGRG00000016893	Tarbp1	96	59.270	ENSGALG00000011000	TARBP1	89	59.189	Gallus_gallus
ENSCGRG00000016893	Tarbp1	94	44.063	ENSGAFG00000007387	si:dkey-85a20.4	85	44.009	Gambusia_affinis
ENSCGRG00000016893	Tarbp1	94	45.120	ENSGACG00000005865	si:dkey-85a20.4	99	45.262	Gasterosteus_aculeatus
ENSCGRG00000016893	Tarbp1	98	63.942	ENSGAGG00000012102	TARBP1	93	64.447	Gopherus_agassizii
ENSCGRG00000016893	Tarbp1	93	76.479	ENSGGOG00000022879	TARBP1	99	76.479	Gorilla_gorilla
ENSCGRG00000016893	Tarbp1	94	45.429	ENSHBUG00000008877	si:dkey-85a20.4	85	45.538	Haplochromis_burtoni
ENSCGRG00000016893	Tarbp1	96	78.365	ENSHGLG00000011592	TARBP1	90	77.724	Heterocephalus_glaber_female
ENSCGRG00000016893	Tarbp1	99	76.724	ENSHGLG00100015169	TARBP1	99	76.724	Heterocephalus_glaber_male
ENSCGRG00000016893	Tarbp1	93	42.426	ENSIPUG00000005249	si:dkey-85a20.4	83	42.426	Ictalurus_punctatus
ENSCGRG00000016893	Tarbp1	96	73.404	ENSSTOG00000032291	TARBP1	99	73.404	Ictidomys_tridecemlineatus
ENSCGRG00000016893	Tarbp1	99	74.628	ENSJJAG00000017840	Tarbp1	99	74.628	Jaculus_jaculus
ENSCGRG00000016893	Tarbp1	73	47.523	ENSKMAG00000017546	si:dkey-85a20.4	75	47.523	Kryptolebias_marmoratus
ENSCGRG00000016893	Tarbp1	72	49.933	ENSLBEG00000012132	si:dkey-85a20.4	79	49.933	Labrus_bergylta
ENSCGRG00000016893	Tarbp1	97	51.348	ENSLACG00000004337	TARBP1	89	51.093	Latimeria_chalumnae
ENSCGRG00000016893	Tarbp1	95	48.722	ENSLOCG00000016214	si:dkey-85a20.4	85	48.722	Lepisosteus_oculatus
ENSCGRG00000016893	Tarbp1	94	76.487	ENSLAFG00000011394	TARBP1	94	73.606	Loxodonta_africana
ENSCGRG00000016893	Tarbp1	99	74.232	ENSMFAG00000041068	TARBP1	92	74.097	Macaca_fascicularis
ENSCGRG00000016893	Tarbp1	99	74.198	ENSMMUG00000021703	TARBP1	91	73.503	Macaca_mulatta
ENSCGRG00000016893	Tarbp1	99	76.483	ENSMNEG00000045002	TARBP1	91	75.950	Macaca_nemestrina
ENSCGRG00000016893	Tarbp1	92	78.164	ENSMLEG00000044182	TARBP1	99	78.164	Mandrillus_leucophaeus
ENSCGRG00000016893	Tarbp1	92	45.178	ENSMAMG00000021760	si:dkey-85a20.4	86	44.776	Mastacembelus_armatus
ENSCGRG00000016893	Tarbp1	94	45.429	ENSMZEG00005005751	si:dkey-85a20.4	85	45.429	Maylandia_zebra
ENSCGRG00000016893	Tarbp1	100	94.708	ENSMAUG00000020968	Tarbp1	99	94.708	Mesocricetus_auratus
ENSCGRG00000016893	Tarbp1	99	69.121	ENSMICG00000015280	TARBP1	99	69.121	Microcebus_murinus
ENSCGRG00000016893	Tarbp1	100	90.063	ENSMOCG00000004128	Tarbp1	98	90.063	Microtus_ochrogaster
ENSCGRG00000016893	Tarbp1	93	43.875	ENSMMOG00000007795	si:dkey-85a20.4	85	43.986	Mola_mola
ENSCGRG00000016893	Tarbp1	97	67.661	ENSMODG00000008504	TARBP1	87	67.264	Monodelphis_domestica
ENSCGRG00000016893	Tarbp1	93	44.204	ENSMALG00000002916	si:dkey-85a20.4	85	44.325	Monopterus_albus
ENSCGRG00000016893	Tarbp1	100	88.150	MGP_CAROLIEiJ_G0031729	Tarbp1	93	88.358	Mus_caroli
ENSCGRG00000016893	Tarbp1	99	88.117	ENSMUSG00000090290	Tarbp1	98	88.117	Mus_musculus
ENSCGRG00000016893	Tarbp1	99	88.550	MGP_PahariEiJ_G0023326	Tarbp1	93	88.550	Mus_pahari
ENSCGRG00000016893	Tarbp1	99	87.978	MGP_SPRETEiJ_G0032846	Tarbp1	98	87.978	Mus_spretus
ENSCGRG00000016893	Tarbp1	85	75.843	ENSMPUG00000002802	TARBP1	100	75.843	Mustela_putorius_furo
ENSCGRG00000016893	Tarbp1	92	72.263	ENSMLUG00000002414	TARBP1	99	73.142	Myotis_lucifugus
ENSCGRG00000016893	Tarbp1	99	76.971	ENSNLEG00000002518	TARBP1	91	76.434	Nomascus_leucogenys
ENSCGRG00000016893	Tarbp1	60	71.674	ENSMEUG00000011370	-	57	71.674	Notamacropus_eugenii
ENSCGRG00000016893	Tarbp1	78	80.263	ENSOPRG00000013822	TARBP1	71	80.263	Ochotona_princeps
ENSCGRG00000016893	Tarbp1	97	76.707	ENSODEG00000005238	TARBP1	99	76.161	Octodon_degus
ENSCGRG00000016893	Tarbp1	92	45.409	ENSONIG00000009789	si:dkey-85a20.4	99	45.141	Oreochromis_niloticus
ENSCGRG00000016893	Tarbp1	97	76.923	ENSOCUG00000017418	TARBP1	90	75.560	Oryctolagus_cuniculus
ENSCGRG00000016893	Tarbp1	94	43.521	ENSORLG00000010529	si:dkey-85a20.4	85	43.561	Oryzias_latipes
ENSCGRG00000016893	Tarbp1	94	43.592	ENSORLG00020019264	si:dkey-85a20.4	85	43.631	Oryzias_latipes_hni
ENSCGRG00000016893	Tarbp1	94	43.454	ENSORLG00015003276	si:dkey-85a20.4	85	43.494	Oryzias_latipes_hsok
ENSCGRG00000016893	Tarbp1	98	73.407	ENSOGAG00000002379	TARBP1	89	73.407	Otolemur_garnettii
ENSCGRG00000016893	Tarbp1	99	72.709	ENSOARG00000003434	TARBP1	99	72.842	Ovis_aries
ENSCGRG00000016893	Tarbp1	92	78.882	ENSPPAG00000028097	TARBP1	99	78.882	Pan_paniscus
ENSCGRG00000016893	Tarbp1	95	73.060	ENSPPRG00000013561	TARBP1	99	68.527	Panthera_pardus
ENSCGRG00000016893	Tarbp1	91	77.296	ENSPTIG00000009281	TARBP1	99	77.296	Panthera_tigris_altaica
ENSCGRG00000016893	Tarbp1	99	77.181	ENSPTRG00000002124	TARBP1	98	76.641	Pan_troglodytes
ENSCGRG00000016893	Tarbp1	99	76.832	ENSPANG00000021933	TARBP1	91	76.296	Papio_anubis
ENSCGRG00000016893	Tarbp1	94	46.775	ENSPKIG00000016716	si:dkey-85a20.4	84	46.775	Paramormyrops_kingsleyae
ENSCGRG00000016893	Tarbp1	87	64.981	ENSPSIG00000010699	TARBP1	99	64.981	Pelodiscus_sinensis
ENSCGRG00000016893	Tarbp1	100	89.362	ENSPEMG00000006888	Tarbp1	100	89.362	Peromyscus_maniculatus_bairdii
ENSCGRG00000016893	Tarbp1	86	82.051	ENSPCIG00000029710	TARBP1	87	82.051	Phascolarctos_cinereus
ENSCGRG00000016893	Tarbp1	94	43.524	ENSPFOG00000013020	si:dkey-85a20.4	99	43.746	Poecilia_formosa
ENSCGRG00000016893	Tarbp1	94	43.626	ENSPLAG00000006044	si:dkey-85a20.4	85	43.847	Poecilia_latipinna
ENSCGRG00000016893	Tarbp1	94	43.546	ENSPMEG00000017857	si:dkey-85a20.4	85	43.768	Poecilia_mexicana
ENSCGRG00000016893	Tarbp1	94	44.381	ENSPREG00000022753	si:dkey-85a20.4	85	44.602	Poecilia_reticulata
ENSCGRG00000016893	Tarbp1	91	76.586	ENSPPYG00000000102	TARBP1	90	76.586	Pongo_abelii
ENSCGRG00000016893	Tarbp1	80	87.838	ENSPCAG00000004808	TARBP1	75	87.838	Procavia_capensis
ENSCGRG00000016893	Tarbp1	98	73.540	ENSPCOG00000005666	TARBP1	90	73.540	Propithecus_coquereli
ENSCGRG00000016893	Tarbp1	95	63.759	ENSPVAG00000014798	TARBP1	90	63.278	Pteropus_vampyrus
ENSCGRG00000016893	Tarbp1	94	44.515	ENSPNYG00000019135	si:dkey-85a20.4	85	44.515	Pundamilia_nyererei
ENSCGRG00000016893	Tarbp1	100	83.044	ENSRNOG00000053574	Tarbp1	99	83.044	Rattus_norvegicus
ENSCGRG00000016893	Tarbp1	99	71.312	ENSRBIG00000043362	TARBP1	99	71.312	Rhinopithecus_bieti
ENSCGRG00000016893	Tarbp1	99	76.204	ENSRROG00000029527	TARBP1	96	75.549	Rhinopithecus_roxellana
ENSCGRG00000016893	Tarbp1	92	78.280	ENSSBOG00000034503	TARBP1	96	78.280	Saimiri_boliviensis_boliviensis
ENSCGRG00000016893	Tarbp1	91	69.568	ENSSHAG00000000013	TARBP1	99	69.568	Sarcophilus_harrisii
ENSCGRG00000016893	Tarbp1	93	44.778	ENSSFOG00015002660	si:dkey-85a20.4	97	46.051	Scleropages_formosus
ENSCGRG00000016893	Tarbp1	92	45.638	ENSSMAG00000007081	si:dkey-85a20.4	82	45.710	Scophthalmus_maximus
ENSCGRG00000016893	Tarbp1	94	43.960	ENSSDUG00000023566	si:dkey-85a20.4	85	43.960	Seriola_dumerili
ENSCGRG00000016893	Tarbp1	94	45.046	ENSSLDG00000020200	si:dkey-85a20.4	86	45.257	Seriola_lalandi_dorsalis
ENSCGRG00000016893	Tarbp1	84	78.472	ENSSARG00000012207	TARBP1	76	78.472	Sorex_araneus
ENSCGRG00000016893	Tarbp1	98	61.570	ENSSPUG00000015364	TARBP1	91	61.299	Sphenodon_punctatus
ENSCGRG00000016893	Tarbp1	92	44.907	ENSSPAG00000007213	si:dkey-85a20.4	85	44.515	Stegastes_partitus
ENSCGRG00000016893	Tarbp1	99	76.008	ENSSSCG00000010160	TARBP1	92	75.739	Sus_scrofa
ENSCGRG00000016893	Tarbp1	89	63.198	ENSTGUG00000010214	TARBP1	100	63.198	Taeniopygia_guttata
ENSCGRG00000016893	Tarbp1	93	43.403	ENSTNIG00000016586	si:dkey-85a20.4	99	43.403	Tetraodon_nigroviridis
ENSCGRG00000016893	Tarbp1	89	72.104	ENSTTRG00000008707	TARBP1	85	72.256	Tursiops_truncatus
ENSCGRG00000016893	Tarbp1	90	77.627	ENSUMAG00000006730	TARBP1	99	77.627	Ursus_maritimus
ENSCGRG00000016893	Tarbp1	77	89.362	ENSVPAG00000007665	TARBP1	79	89.362	Vicugna_pacos
ENSCGRG00000016893	Tarbp1	95	76.006	ENSVVUG00000007460	TARBP1	99	78.445	Vulpes_vulpes
ENSCGRG00000016893	Tarbp1	92	53.232	ENSXETG00000016224	tarbp1	99	53.232	Xenopus_tropicalis
ENSCGRG00000016893	Tarbp1	86	48.295	ENSXCOG00000011779	si:dkey-85a20.4	97	43.852	Xiphophorus_couchianus
ENSCGRG00000016893	Tarbp1	71	42.535	ENSXMAG00000009600	si:dkey-85a20.4	100	42.924	Xiphophorus_maculatus