EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000017181 (Gene tree)
Gene ID: -
Gene Symbol: Hfm1
Alias: A330009G12Rik|LOC381663|Mer3|Sec63d1
Full Name: HFM1%2C ATP dependent DNA helicase homolog
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Minus strand
Length: 80106 bases
Position: chrJH001037.1:442026-522131
Accession: 100761873
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000023712	ResIII	PF04851.15	4.6e-11	1	1
ENSCGRP00000023712	DEAD	PF00270.29	7.2e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000024039	-	4293	XM_003508963	ENSCGRP00000023712	1430 (aa)	XP_003509011	-

Gene Model

Click here to download ENSCGRG00000017181's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000017181's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000017181	Hfm1	51	36.667	ENSCGRG00000012933	Ascc3	61	36.667
ENSCGRG00000017181	Hfm1	59	32.439	ENSCGRG00000016472	Snrnp200	75	32.439

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000017181	Hfm1	100	78.179	ENSG00000162669	HFM1	100	78.179	Homo_sapiens
ENSCGRG00000017181	Hfm1	58	64.833	ENSAPOG00000005304	hfm1	94	64.833	Acanthochromis_polyacanthus
ENSCGRG00000017181	Hfm1	100	76.944	ENSAMEG00000000432	HFM1	100	76.944	Ailuropoda_melanoleuca
ENSCGRG00000017181	Hfm1	73	57.089	ENSACIG00000021553	hfm1	94	57.089	Amphilophus_citrinellus
ENSCGRG00000017181	Hfm1	58	64.988	ENSAOCG00000022839	hfm1	96	67.213	Amphiprion_ocellaris
ENSCGRG00000017181	Hfm1	58	64.868	ENSAPEG00000014316	hfm1	96	67.509	Amphiprion_percula
ENSCGRG00000017181	Hfm1	67	62.243	ENSATEG00000019181	hfm1	80	61.538	Anabas_testudineus
ENSCGRG00000017181	Hfm1	100	57.974	ENSAPLG00000013639	HFM1	100	57.974	Anas_platyrhynchos
ENSCGRG00000017181	Hfm1	100	76.058	ENSANAG00000029513	HFM1	100	76.058	Aotus_nancymaae
ENSCGRG00000017181	Hfm1	70	58.039	ENSACLG00000009033	hfm1	98	62.884	Astatotilapia_calliptera
ENSCGRG00000017181	Hfm1	73	60.711	ENSAMXG00000006108	hfm1	73	60.428	Astyanax_mexicanus
ENSCGRG00000017181	Hfm1	100	75.850	ENSBTAG00000020856	HFM1	100	75.850	Bos_taurus
ENSCGRG00000017181	Hfm1	100	76.928	ENSCJAG00000001843	HFM1	100	76.928	Callithrix_jacchus
ENSCGRG00000017181	Hfm1	100	76.389	ENSCAFG00000020187	HFM1	100	76.389	Canis_familiaris
ENSCGRG00000017181	Hfm1	100	77.099	ENSTSYG00000014250	HFM1	100	77.099	Carlito_syrichta
ENSCGRG00000017181	Hfm1	99	74.234	ENSCPOG00000007421	HFM1	99	74.234	Cavia_porcellus
ENSCGRG00000017181	Hfm1	100	76.372	ENSCCAG00000033206	HFM1	100	76.372	Cebus_capucinus
ENSCGRG00000017181	Hfm1	100	77.623	ENSCATG00000030987	HFM1	100	77.623	Cercocebus_atys
ENSCGRG00000017181	Hfm1	100	74.747	ENSCLAG00000005173	HFM1	99	74.747	Chinchilla_lanigera
ENSCGRG00000017181	Hfm1	69	88.158	ENSCHOG00000011824	-	77	88.158	Choloepus_hoffmanni
ENSCGRG00000017181	Hfm1	100	95.404	ENSCGRG00001016995	Hfm1	100	95.404	Cricetulus_griseus_chok1gshd
ENSCGRG00000017181	Hfm1	71	56.980	ENSCSEG00000017659	hfm1	94	57.048	Cynoglossus_semilaevis
ENSCGRG00000017181	Hfm1	50	66.573	ENSCVAG00000005075	hfm1	86	66.573	Cyprinodon_variegatus
ENSCGRG00000017181	Hfm1	76	54.389	ENSDARG00000104288	hfm1	96	54.389	Danio_rerio
ENSCGRG00000017181	Hfm1	100	72.391	ENSDNOG00000004776	HFM1	100	72.391	Dasypus_novemcinctus
ENSCGRG00000017181	Hfm1	100	74.089	ENSDORG00000014661	Hfm1	100	74.089	Dipodomys_ordii
ENSCGRG00000017181	Hfm1	71	81.065	ENSEASG00005015424	HFM1	97	81.065	Equus_asinus_asinus
ENSCGRG00000017181	Hfm1	100	75.168	ENSECAG00000024039	HFM1	100	75.168	Equus_caballus
ENSCGRG00000017181	Hfm1	63	64.978	ENSELUG00000018944	hfm1	97	64.978	Esox_lucius
ENSCGRG00000017181	Hfm1	100	77.708	ENSFCAG00000029116	HFM1	100	77.708	Felis_catus
ENSCGRG00000017181	Hfm1	100	57.545	ENSFALG00000001781	HFM1	100	57.655	Ficedula_albicollis
ENSCGRG00000017181	Hfm1	100	73.387	ENSFDAG00000020816	HFM1	100	73.387	Fukomys_damarensis
ENSCGRG00000017181	Hfm1	66	58.982	ENSGMOG00000017436	hfm1	99	59.167	Gadus_morhua
ENSCGRG00000017181	Hfm1	71	59.981	ENSGAFG00000018093	hfm1	95	64.345	Gambusia_affinis
ENSCGRG00000017181	Hfm1	67	59.959	ENSGACG00000015686	hfm1	99	60.188	Gasterosteus_aculeatus
ENSCGRG00000017181	Hfm1	100	78.040	ENSGGOG00000038524	HFM1	100	78.040	Gorilla_gorilla
ENSCGRG00000017181	Hfm1	70	59.020	ENSHBUG00000007309	hfm1	95	59.549	Haplochromis_burtoni
ENSCGRG00000017181	Hfm1	57	62.255	ENSHCOG00000019632	hfm1	97	62.255	Hippocampus_comes
ENSCGRG00000017181	Hfm1	71	60.848	ENSIPUG00000017020	hfm1	92	64.755	Ictalurus_punctatus
ENSCGRG00000017181	Hfm1	100	75.905	ENSJJAG00000017198	Hfm1	100	75.905	Jaculus_jaculus
ENSCGRG00000017181	Hfm1	62	61.394	ENSKMAG00000002282	hfm1	90	61.462	Kryptolebias_marmoratus
ENSCGRG00000017181	Hfm1	71	57.900	ENSLBEG00000006759	hfm1	96	63.409	Labrus_bergylta
ENSCGRG00000017181	Hfm1	67	66.942	ENSLACG00000010698	HFM1	100	63.739	Latimeria_chalumnae
ENSCGRG00000017181	Hfm1	72	63.108	ENSLOCG00000004931	hfm1	96	63.012	Lepisosteus_oculatus
ENSCGRG00000017181	Hfm1	52	84.430	ENSLAFG00000015903	-	100	84.430	Loxodonta_africana
ENSCGRG00000017181	Hfm1	100	75.017	ENSMFAG00000003649	HFM1	100	75.017	Macaca_fascicularis
ENSCGRG00000017181	Hfm1	100	77.623	ENSMMUG00000006819	HFM1	100	77.623	Macaca_mulatta
ENSCGRG00000017181	Hfm1	56	67.293	ENSMAMG00000004623	hfm1	97	64.734	Mastacembelus_armatus
ENSCGRG00000017181	Hfm1	70	58.039	ENSMZEG00005004679	hfm1	98	62.884	Maylandia_zebra
ENSCGRG00000017181	Hfm1	54	75.323	ENSMGAG00000008437	HFM1	96	75.323	Meleagris_gallopavo
ENSCGRG00000017181	Hfm1	100	92.559	ENSMAUG00000018858	Hfm1	100	92.559	Mesocricetus_auratus
ENSCGRG00000017181	Hfm1	100	77.153	ENSMICG00000037935	HFM1	100	77.153	Microcebus_murinus
ENSCGRG00000017181	Hfm1	100	86.653	ENSMOCG00000014812	Hfm1	100	86.653	Microtus_ochrogaster
ENSCGRG00000017181	Hfm1	62	62.220	ENSMMOG00000006148	hfm1	95	62.993	Mola_mola
ENSCGRG00000017181	Hfm1	70	58.916	ENSMALG00000002401	hfm1	94	65.102	Monopterus_albus
ENSCGRG00000017181	Hfm1	95	80.355	MGP_CAROLIEiJ_G0027496	Hfm1	100	80.355	Mus_caroli
ENSCGRG00000017181	Hfm1	100	85.167	ENSMUSG00000043410	Hfm1	100	85.167	Mus_musculus
ENSCGRG00000017181	Hfm1	100	84.819	MGP_PahariEiJ_G0017268	Hfm1	100	84.889	Mus_pahari
ENSCGRG00000017181	Hfm1	100	85.237	MGP_SPRETEiJ_G0028495	Hfm1	100	85.237	Mus_spretus
ENSCGRG00000017181	Hfm1	100	74.159	ENSMPUG00000004594	HFM1	100	74.159	Mustela_putorius_furo
ENSCGRG00000017181	Hfm1	100	74.567	ENSMLUG00000010200	HFM1	100	74.567	Myotis_lucifugus
ENSCGRG00000017181	Hfm1	70	55.392	ENSNBRG00000002910	hfm1	97	63.350	Neolamprologus_brichardi
ENSCGRG00000017181	Hfm1	100	74.861	ENSNLEG00000010285	HFM1	100	74.861	Nomascus_leucogenys
ENSCGRG00000017181	Hfm1	84	64.470	ENSMEUG00000015788	HFM1	84	64.470	Notamacropus_eugenii
ENSCGRG00000017181	Hfm1	84	73.444	ENSOPRG00000013916	HFM1	84	73.444	Ochotona_princeps
ENSCGRG00000017181	Hfm1	71	60.311	ENSONIG00000010590	hfm1	99	60.174	Oreochromis_niloticus
ENSCGRG00000017181	Hfm1	57	63.592	ENSORLG00000026844	hfm1	99	63.592	Oryzias_latipes
ENSCGRG00000017181	Hfm1	67	55.901	ENSORLG00020002951	hfm1	76	55.901	Oryzias_latipes_hni
ENSCGRG00000017181	Hfm1	72	57.261	ENSOMEG00000016474	hfm1	68	61.038	Oryzias_melastigma
ENSCGRG00000017181	Hfm1	85	78.892	ENSOGAG00000032369	HFM1	99	78.934	Otolemur_garnettii
ENSCGRG00000017181	Hfm1	100	76.075	ENSOARG00000015812	HFM1	100	76.075	Ovis_aries
ENSCGRG00000017181	Hfm1	92	79.669	ENSPPAG00000024582	HFM1	100	79.669	Pan_paniscus
ENSCGRG00000017181	Hfm1	100	77.654	ENSPPRG00000003270	HFM1	100	77.654	Panthera_pardus
ENSCGRG00000017181	Hfm1	100	77.516	ENSPTIG00000018881	HFM1	100	77.516	Panthera_tigris_altaica
ENSCGRG00000017181	Hfm1	100	78.249	ENSPTRG00000000948	HFM1	100	78.249	Pan_troglodytes
ENSCGRG00000017181	Hfm1	100	77.693	ENSPANG00000009838	HFM1	100	77.693	Papio_anubis
ENSCGRG00000017181	Hfm1	62	65.579	ENSPKIG00000003810	hfm1	95	66.223	Paramormyrops_kingsleyae
ENSCGRG00000017181	Hfm1	58	64.087	ENSPMGG00000011059	hfm1	100	64.087	Periophthalmus_magnuspinnatus
ENSCGRG00000017181	Hfm1	100	90.111	ENSPEMG00000022852	Hfm1	100	90.111	Peromyscus_maniculatus_bairdii
ENSCGRG00000017181	Hfm1	100	63.831	ENSPCIG00000014233	HFM1	100	63.831	Phascolarctos_cinereus
ENSCGRG00000017181	Hfm1	71	61.185	ENSPFOG00000017194	hfm1	99	61.377	Poecilia_formosa
ENSCGRG00000017181	Hfm1	74	59.815	ENSPLAG00000000571	hfm1	95	59.815	Poecilia_latipinna
ENSCGRG00000017181	Hfm1	71	61.831	ENSPMEG00000019475	hfm1	92	61.831	Poecilia_mexicana
ENSCGRG00000017181	Hfm1	74	59.480	ENSPREG00000007803	hfm1	95	63.830	Poecilia_reticulata
ENSCGRG00000017181	Hfm1	100	77.832	ENSPPYG00000001163	HFM1	100	77.832	Pongo_abelii
ENSCGRG00000017181	Hfm1	70	74.554	ENSPCAG00000004289	-	70	74.554	Procavia_capensis
ENSCGRG00000017181	Hfm1	100	68.841	ENSPVAG00000009713	HFM1	100	68.841	Pteropus_vampyrus
ENSCGRG00000017181	Hfm1	65	61.547	ENSPNYG00000001795	hfm1	98	62.884	Pundamilia_nyererei
ENSCGRG00000017181	Hfm1	59	66.310	ENSPNAG00000010865	hfm1	83	66.310	Pygocentrus_nattereri
ENSCGRG00000017181	Hfm1	100	84.401	ENSRNOG00000023299	Hfm1	100	84.401	Rattus_norvegicus
ENSCGRG00000017181	Hfm1	100	77.693	ENSRROG00000045569	HFM1	100	77.693	Rhinopithecus_roxellana
ENSCGRG00000017181	Hfm1	100	74.705	ENSSBOG00000027456	HFM1	100	74.705	Saimiri_boliviensis_boliviensis
ENSCGRG00000017181	Hfm1	60	66.859	ENSSHAG00000014616	-	98	66.859	Sarcophilus_harrisii
ENSCGRG00000017181	Hfm1	85	54.596	ENSSFOG00015020129	hfm1	82	54.714	Scleropages_formosus
ENSCGRG00000017181	Hfm1	62	64.246	ENSSMAG00000006907	hfm1	87	64.246	Scophthalmus_maximus
ENSCGRG00000017181	Hfm1	58	64.649	ENSSDUG00000011424	hfm1	93	64.649	Seriola_dumerili
ENSCGRG00000017181	Hfm1	58	64.897	ENSSLDG00000016386	hfm1	92	64.897	Seriola_lalandi_dorsalis
ENSCGRG00000017181	Hfm1	69	57.533	ENSSPAG00000001023	hfm1	94	65.468	Stegastes_partitus
ENSCGRG00000017181	Hfm1	100	73.419	ENSSSCG00000006912	HFM1	100	73.419	Sus_scrofa
ENSCGRG00000017181	Hfm1	67	73.563	ENSTGUG00000006172	HFM1	99	73.973	Taeniopygia_guttata
ENSCGRG00000017181	Hfm1	100	73.940	ENSTTRG00000013933	HFM1	100	73.940	Tursiops_truncatus
ENSCGRG00000017181	Hfm1	93	77.194	ENSVPAG00000011331	HFM1	93	77.194	Vicugna_pacos
ENSCGRG00000017181	Hfm1	71	78.101	ENSVVUG00000020760	HFM1	99	77.907	Vulpes_vulpes
ENSCGRG00000017181	Hfm1	58	64.891	ENSXMAG00000004178	hfm1	92	64.891	Xiphophorus_maculatus