EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000017332 (Gene tree)
Gene ID: -
Gene Symbol: A1cf
Alias: 1810073H04Rik|ACF|apobec-1 complementation factor
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Minus strand
Length: 45834 bases
Position: chrJH000815.1:577952-623785
Accession: 100767014
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000023919	DND1_DSRM	PF14709.7	1.8e-25	1	1
ENSCGRP00000023919	RRM_1	PF00076.22	9.5e-40	1	3
ENSCGRP00000023919	RRM_1	PF00076.22	9.5e-40	2	3
ENSCGRP00000023919	RRM_1	PF00076.22	9.5e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000024247	-	1788	XM_007648127	ENSCGRP00000023919	595 (aa)	XP_007646317	-

Gene Model

Click here to download ENSCGRG00000017332's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000017332's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000017332	A1cf	51	53.571	ENSCGRG00000005714	Hnrnpr	50	52.681
ENSCGRG00000017332	A1cf	76	55.765	ENSCGRG00000007762	-	89	67.376
ENSCGRG00000017332	A1cf	58	63.610	ENSCGRG00000014760	-	66	63.610
ENSCGRG00000017332	A1cf	92	71.711	ENSCGRG00000011738	Rbm46	97	71.475
ENSCGRG00000017332	A1cf	51	53.074	ENSCGRG00000016282	Syncrip	70	45.812

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000017332	A1cf	100	93.613	ENSG00000148584	A1CF	100	98.507	Homo_sapiens
ENSCGRG00000017332	A1cf	100	72.471	ENSAPOG00000008259	a1cf	100	72.020	Acanthochromis_polyacanthus
ENSCGRG00000017332	A1cf	100	92.941	ENSAMEG00000000523	A1CF	100	92.101	Ailuropoda_melanoleuca
ENSCGRG00000017332	A1cf	100	74.225	ENSACIG00000008632	a1cf	100	75.204	Amphilophus_citrinellus
ENSCGRG00000017332	A1cf	100	72.995	ENSAOCG00000023744	a1cf	93	85.030	Amphiprion_ocellaris
ENSCGRG00000017332	A1cf	100	73.977	ENSAPEG00000009537	a1cf	100	74.346	Amphiprion_percula
ENSCGRG00000017332	A1cf	100	75.081	ENSATEG00000013720	a1cf	100	75.856	Anabas_testudineus
ENSCGRG00000017332	A1cf	100	86.577	ENSAPLG00000002964	A1CF	100	86.242	Anas_platyrhynchos
ENSCGRG00000017332	A1cf	100	82.886	ENSACAG00000015269	A1CF	100	82.047	Anolis_carolinensis
ENSCGRG00000017332	A1cf	100	92.773	ENSANAG00000019974	A1CF	100	92.101	Aotus_nancymaae
ENSCGRG00000017332	A1cf	100	72.222	ENSACLG00000017428	a1cf	100	73.856	Astatotilapia_calliptera
ENSCGRG00000017332	A1cf	100	73.388	ENSAMXG00000018180	a1cf	100	73.223	Astyanax_mexicanus
ENSCGRG00000017332	A1cf	100	91.933	ENSBTAG00000021195	A1CF	100	91.933	Bos_taurus
ENSCGRG00000017332	A1cf	100	94.454	ENSCJAG00000005045	A1CF	100	93.782	Callithrix_jacchus
ENSCGRG00000017332	A1cf	100	92.437	ENSCAFG00000015581	A1CF	100	92.101	Canis_familiaris
ENSCGRG00000017332	A1cf	100	92.437	ENSCAFG00020026421	A1CF	100	92.101	Canis_lupus_dingo
ENSCGRG00000017332	A1cf	100	92.437	ENSCHIG00000020411	A1CF	100	92.437	Capra_hircus
ENSCGRG00000017332	A1cf	95	92.730	ENSTSYG00000001755	A1CF	100	91.103	Carlito_syrichta
ENSCGRG00000017332	A1cf	100	83.544	ENSCAPG00000017386	A1CF	100	83.544	Cavia_aperea
ENSCGRG00000017332	A1cf	100	93.950	ENSCPOG00000009807	A1CF	100	93.445	Cavia_porcellus
ENSCGRG00000017332	A1cf	100	94.286	ENSCCAG00000018168	A1CF	100	93.613	Cebus_capucinus
ENSCGRG00000017332	A1cf	100	92.773	ENSCATG00000043715	A1CF	100	92.101	Cercocebus_atys
ENSCGRG00000017332	A1cf	100	93.121	ENSCLAG00000010424	A1CF	100	93.121	Chinchilla_lanigera
ENSCGRG00000017332	A1cf	100	93.782	ENSCSAG00000007032	A1CF	100	93.109	Chlorocebus_sabaeus
ENSCGRG00000017332	A1cf	98	87.458	ENSCHOG00000009089	A1CF	98	87.288	Choloepus_hoffmanni
ENSCGRG00000017332	A1cf	100	86.577	ENSCPBG00000026464	A1CF	100	86.577	Chrysemys_picta_bellii
ENSCGRG00000017332	A1cf	100	93.782	ENSCANG00000038032	A1CF	100	93.109	Colobus_angolensis_palliatus
ENSCGRG00000017332	A1cf	100	99.160	ENSCGRG00001017413	A1cf	100	99.160	Cricetulus_griseus_chok1gshd
ENSCGRG00000017332	A1cf	100	74.461	ENSCSEG00000002361	a1cf	100	75.124	Cynoglossus_semilaevis
ENSCGRG00000017332	A1cf	100	73.573	ENSCVAG00000010520	a1cf	100	74.715	Cyprinodon_variegatus
ENSCGRG00000017332	A1cf	100	77.371	ENSDARG00000002968	a1cf	100	78.203	Danio_rerio
ENSCGRG00000017332	A1cf	100	92.605	ENSDNOG00000002829	A1CF	100	92.605	Dasypus_novemcinctus
ENSCGRG00000017332	A1cf	81	92.391	ENSETEG00000012527	A1CF	81	92.391	Echinops_telfairi
ENSCGRG00000017332	A1cf	100	94.472	ENSEASG00005012924	A1CF	100	94.305	Equus_asinus_asinus
ENSCGRG00000017332	A1cf	100	94.305	ENSECAG00000010424	A1CF	100	94.137	Equus_caballus
ENSCGRG00000017332	A1cf	78	79.654	ENSEEUG00000000013	A1CF	96	80.846	Erinaceus_europaeus
ENSCGRG00000017332	A1cf	100	78.369	ENSELUG00000003159	a1cf	100	78.869	Esox_lucius
ENSCGRG00000017332	A1cf	100	90.420	ENSFCAG00000011179	A1CF	100	89.580	Felis_catus
ENSCGRG00000017332	A1cf	100	84.564	ENSFALG00000013183	A1CF	100	84.228	Ficedula_albicollis
ENSCGRG00000017332	A1cf	100	91.092	ENSFDAG00000019371	A1CF	100	91.092	Fukomys_damarensis
ENSCGRG00000017332	A1cf	100	68.842	ENSFHEG00000019652	a1cf	96	82.812	Fundulus_heteroclitus
ENSCGRG00000017332	A1cf	100	71.617	ENSGMOG00000018943	a1cf	100	70.792	Gadus_morhua
ENSCGRG00000017332	A1cf	95	85.664	ENSGALG00000003765	A1CF	97	85.310	Gallus_gallus
ENSCGRG00000017332	A1cf	100	69.243	ENSGAFG00000014868	a1cf	100	69.901	Gambusia_affinis
ENSCGRG00000017332	A1cf	100	72.386	ENSGACG00000010241	a1cf	100	73.279	Gasterosteus_aculeatus
ENSCGRG00000017332	A1cf	94	86.501	ENSGAGG00000016508	A1CF	97	86.501	Gopherus_agassizii
ENSCGRG00000017332	A1cf	100	93.782	ENSGGOG00000009670	A1CF	100	93.445	Gorilla_gorilla
ENSCGRG00000017332	A1cf	100	73.083	ENSHBUG00000021959	a1cf	100	74.634	Haplochromis_burtoni
ENSCGRG00000017332	A1cf	100	92.941	ENSHGLG00000008955	A1CF	100	92.941	Heterocephalus_glaber_female
ENSCGRG00000017332	A1cf	100	92.269	ENSHGLG00100000518	A1CF	100	92.269	Heterocephalus_glaber_male
ENSCGRG00000017332	A1cf	100	69.381	ENSHCOG00000017669	a1cf	100	72.195	Hippocampus_comes
ENSCGRG00000017332	A1cf	89	82.682	ENSIPUG00000010367	a1cf	95	82.927	Ictalurus_punctatus
ENSCGRG00000017332	A1cf	100	75.610	ENSKMAG00000006568	a1cf	100	76.098	Kryptolebias_marmoratus
ENSCGRG00000017332	A1cf	99	74.713	ENSLBEG00000020994	a1cf	98	76.026	Labrus_bergylta
ENSCGRG00000017332	A1cf	100	80.968	ENSLACG00000008061	A1CF	100	80.301	Latimeria_chalumnae
ENSCGRG00000017332	A1cf	100	80.833	ENSLOCG00000006302	a1cf	100	80.500	Lepisosteus_oculatus
ENSCGRG00000017332	A1cf	100	92.773	ENSLAFG00000015462	A1CF	100	92.773	Loxodonta_africana
ENSCGRG00000017332	A1cf	100	92.773	ENSMFAG00000035948	A1CF	100	92.101	Macaca_fascicularis
ENSCGRG00000017332	A1cf	100	92.773	ENSMMUG00000007077	A1CF	100	92.101	Macaca_mulatta
ENSCGRG00000017332	A1cf	100	92.605	ENSMNEG00000031454	A1CF	100	91.933	Macaca_nemestrina
ENSCGRG00000017332	A1cf	100	94.118	ENSMLEG00000037223	A1CF	100	93.445	Mandrillus_leucophaeus
ENSCGRG00000017332	A1cf	100	71.686	ENSMAMG00000010402	a1cf	100	73.366	Mastacembelus_armatus
ENSCGRG00000017332	A1cf	100	75.167	ENSMZEG00005013245	a1cf	100	76.333	Maylandia_zebra
ENSCGRG00000017332	A1cf	100	85.930	ENSMGAG00000001507	A1CF	100	85.595	Meleagris_gallopavo
ENSCGRG00000017332	A1cf	100	97.311	ENSMAUG00000007422	A1cf	100	97.311	Mesocricetus_auratus
ENSCGRG00000017332	A1cf	100	91.806	ENSMICG00000003377	A1CF	100	91.472	Microcebus_murinus
ENSCGRG00000017332	A1cf	100	95.966	ENSMOCG00000021536	A1cf	100	95.966	Microtus_ochrogaster
ENSCGRG00000017332	A1cf	100	66.069	ENSMMOG00000009422	a1cf	100	67.430	Mola_mola
ENSCGRG00000017332	A1cf	89	89.831	ENSMODG00000016478	A1CF	97	90.152	Monodelphis_domestica
ENSCGRG00000017332	A1cf	100	72.333	ENSMALG00000012992	a1cf	100	72.000	Monopterus_albus
ENSCGRG00000017332	A1cf	100	95.126	MGP_CAROLIEiJ_G0022873	A1cf	100	95.126	Mus_caroli
ENSCGRG00000017332	A1cf	100	95.126	ENSMUSG00000052595	A1cf	99	97.105	Mus_musculus
ENSCGRG00000017332	A1cf	100	94.286	MGP_PahariEiJ_G0014366	A1cf	100	94.286	Mus_pahari
ENSCGRG00000017332	A1cf	100	94.790	MGP_SPRETEiJ_G0023792	A1cf	100	94.790	Mus_spretus
ENSCGRG00000017332	A1cf	100	87.395	ENSMPUG00000016971	A1CF	100	86.387	Mustela_putorius_furo
ENSCGRG00000017332	A1cf	100	92.773	ENSMLUG00000016071	A1CF	100	92.773	Myotis_lucifugus
ENSCGRG00000017332	A1cf	100	94.790	ENSNGAG00000015136	A1cf	100	94.790	Nannospalax_galili
ENSCGRG00000017332	A1cf	100	73.409	ENSNBRG00000001712	a1cf	100	74.797	Neolamprologus_brichardi
ENSCGRG00000017332	A1cf	100	94.286	ENSNLEG00000012028	A1CF	100	94.286	Nomascus_leucogenys
ENSCGRG00000017332	A1cf	94	86.146	ENSMEUG00000015909	A1CF	100	85.968	Notamacropus_eugenii
ENSCGRG00000017332	A1cf	88	84.000	ENSOPRG00000010667	A1CF	97	83.871	Ochotona_princeps
ENSCGRG00000017332	A1cf	100	73.736	ENSONIG00000019105	a1cf	100	74.472	Oreochromis_niloticus
ENSCGRG00000017332	A1cf	78	87.580	ENSOANG00000007360	A1CF	99	87.580	Ornithorhynchus_anatinus
ENSCGRG00000017332	A1cf	100	91.946	ENSOCUG00000011587	A1CF	100	91.946	Oryctolagus_cuniculus
ENSCGRG00000017332	A1cf	100	73.039	ENSORLG00000013342	a1cf	100	73.039	Oryzias_latipes
ENSCGRG00000017332	A1cf	100	73.736	ENSORLG00020000586	a1cf	100	73.856	Oryzias_latipes_hni
ENSCGRG00000017332	A1cf	100	73.573	ENSORLG00015018569	a1cf	100	74.020	Oryzias_latipes_hsok
ENSCGRG00000017332	A1cf	100	72.668	ENSOMEG00000013531	a1cf	100	72.177	Oryzias_melastigma
ENSCGRG00000017332	A1cf	100	92.773	ENSOGAG00000012884	A1CF	100	91.765	Otolemur_garnettii
ENSCGRG00000017332	A1cf	100	92.941	ENSOARG00000013695	A1CF	100	92.941	Ovis_aries
ENSCGRG00000017332	A1cf	97	91.681	ENSPPAG00000028115	A1CF	100	96.356	Pan_paniscus
ENSCGRG00000017332	A1cf	100	92.101	ENSPPRG00000012180	A1CF	100	91.261	Panthera_pardus
ENSCGRG00000017332	A1cf	100	92.101	ENSPTIG00000021223	A1CF	100	91.261	Panthera_tigris_altaica
ENSCGRG00000017332	A1cf	100	93.613	ENSPTRG00000002508	A1CF	100	93.277	Pan_troglodytes
ENSCGRG00000017332	A1cf	100	92.773	ENSPANG00000021988	A1CF	100	92.101	Papio_anubis
ENSCGRG00000017332	A1cf	100	79.201	ENSPKIG00000025176	a1cf	100	79.035	Paramormyrops_kingsleyae
ENSCGRG00000017332	A1cf	100	85.235	ENSPSIG00000010318	A1CF	100	85.235	Pelodiscus_sinensis
ENSCGRG00000017332	A1cf	88	70.857	ENSPMGG00000013359	a1cf	89	71.238	Periophthalmus_magnuspinnatus
ENSCGRG00000017332	A1cf	100	96.134	ENSPEMG00000015021	A1cf	100	96.134	Peromyscus_maniculatus_bairdii
ENSCGRG00000017332	A1cf	100	86.409	ENSPCIG00000002175	A1CF	100	86.242	Phascolarctos_cinereus
ENSCGRG00000017332	A1cf	100	74.919	ENSPFOG00000006683	a1cf	100	75.812	Poecilia_formosa
ENSCGRG00000017332	A1cf	100	74.756	ENSPFOG00000007437	-	100	75.649	Poecilia_formosa
ENSCGRG00000017332	A1cf	100	73.616	ENSPLAG00000001210	-	100	74.513	Poecilia_latipinna
ENSCGRG00000017332	A1cf	100	73.616	ENSPLAG00000000026	a1cf	100	74.513	Poecilia_latipinna
ENSCGRG00000017332	A1cf	100	67.320	ENSPMEG00000015529	-	100	68.627	Poecilia_mexicana
ENSCGRG00000017332	A1cf	100	66.176	ENSPMEG00000000921	a1cf	100	67.484	Poecilia_mexicana
ENSCGRG00000017332	A1cf	100	75.244	ENSPREG00000016298	a1cf	100	76.059	Poecilia_reticulata
ENSCGRG00000017332	A1cf	100	92.773	ENSPPYG00000002819	A1CF	100	92.773	Pongo_abelii
ENSCGRG00000017332	A1cf	79	71.036	ENSPCAG00000006463	A1CF	70	87.234	Procavia_capensis
ENSCGRG00000017332	A1cf	100	93.624	ENSPCOG00000024172	A1CF	100	93.624	Propithecus_coquereli
ENSCGRG00000017332	A1cf	100	74.388	ENSPNYG00000017944	a1cf	100	75.935	Pundamilia_nyererei
ENSCGRG00000017332	A1cf	100	78.477	ENSPNAG00000007704	a1cf	100	78.146	Pygocentrus_nattereri
ENSCGRG00000017332	A1cf	100	94.118	ENSRNOG00000033195	A1cf	100	94.118	Rattus_norvegicus
ENSCGRG00000017332	A1cf	100	87.437	ENSRBIG00000042892	A1CF	100	89.628	Rhinopithecus_bieti
ENSCGRG00000017332	A1cf	100	94.118	ENSRROG00000041398	A1CF	100	93.445	Rhinopithecus_roxellana
ENSCGRG00000017332	A1cf	100	94.118	ENSSBOG00000021930	A1CF	100	94.118	Saimiri_boliviensis_boliviensis
ENSCGRG00000017332	A1cf	100	87.752	ENSSHAG00000005096	A1CF	100	87.248	Sarcophilus_harrisii
ENSCGRG00000017332	A1cf	100	77.612	ENSSFOG00015011774	a1cf	100	77.446	Scleropages_formosus
ENSCGRG00000017332	A1cf	100	73.941	ENSSMAG00000013271	a1cf	100	74.267	Scophthalmus_maximus
ENSCGRG00000017332	A1cf	100	75.622	ENSSDUG00000013930	a1cf	100	76.080	Seriola_dumerili
ENSCGRG00000017332	A1cf	100	68.430	ENSSLDG00000004290	a1cf	100	69.091	Seriola_lalandi_dorsalis
ENSCGRG00000017332	A1cf	95	81.095	ENSSARG00000005940	A1CF	96	81.095	Sorex_araneus
ENSCGRG00000017332	A1cf	95	86.116	ENSSPUG00000006797	A1CF	95	85.413	Sphenodon_punctatus
ENSCGRG00000017332	A1cf	100	93.613	ENSSSCG00000010431	A1CF	100	93.613	Sus_scrofa
ENSCGRG00000017332	A1cf	100	86.477	ENSTGUG00000005090	A1CF	100	86.120	Taeniopygia_guttata
ENSCGRG00000017332	A1cf	100	73.573	ENSTRUG00000001982	a1cf	100	73.409	Takifugu_rubripes
ENSCGRG00000017332	A1cf	100	73.821	ENSTNIG00000003580	a1cf	100	73.496	Tetraodon_nigroviridis
ENSCGRG00000017332	A1cf	97	84.402	ENSTTRG00000013190	A1CF	95	84.402	Tursiops_truncatus
ENSCGRG00000017332	A1cf	100	91.597	ENSUAMG00000020065	A1CF	100	90.588	Ursus_americanus
ENSCGRG00000017332	A1cf	100	92.773	ENSUMAG00000011162	A1CF	100	91.765	Ursus_maritimus
ENSCGRG00000017332	A1cf	87	87.332	ENSVPAG00000006130	A1CF	86	87.332	Vicugna_pacos
ENSCGRG00000017332	A1cf	100	91.261	ENSVVUG00000002504	A1CF	100	90.924	Vulpes_vulpes
ENSCGRG00000017332	A1cf	100	77.667	ENSXETG00000006611	a1cf	100	77.500	Xenopus_tropicalis
ENSCGRG00000017332	A1cf	100	75.082	ENSXCOG00000003302	a1cf	100	75.902	Xiphophorus_couchianus
ENSCGRG00000017332	A1cf	100	76.230	ENSXMAG00000016703	a1cf	100	77.049	Xiphophorus_maculatus