EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00000017603 (Gene tree)
Gene ID: -
Gene Symbol: Srrm1
Alias: SRm160
Full Name: serine and arginine repetitive matrix 1
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 28003 bases
Position: chrJH000526.1:907567-935569
Accession: 100757992
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000024284	PWI	PF01480.17	5.9e-30	1	1
ENSCGRP00000024283	PWI	PF01480.17	6e-30	1	1
ENSCGRP00000024282	PWI	PF01480.17	6.1e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000024614	-	3631	XM_007618994	ENSCGRP00000024284	898 (aa)	XP_007617184	-
ENSCGRT00000024613	-	3692	XM_007618991	ENSCGRP00000024283	912 (aa)	XP_007617181	-
ENSCGRT00000024612	-	2805	-	ENSCGRP00000024282	934 (aa)	-	-

Gene Model

Click here to download ENSCGRG00000017603's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000017603's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000017603	Srrm1	75	95.779	ENSG00000133226	SRRM1	100	100.000	Homo_sapiens
ENSCGRG00000017603	Srrm1	55	96.356	ENSCCAG00000029474	SRRM1	96	96.356	Cebus_capucinus
ENSCGRG00000017603	Srrm1	53	95.808	ENSCHOG00000000027	SRRM1	51	95.266	Choloepus_hoffmanni
ENSCGRG00000017603	Srrm1	100	100.000	ENSCGRG00001014174	Srrm1	100	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000017603	Srrm1	60	97.083	ENSMLEG00000038030	-	89	96.920	Mandrillus_leucophaeus
ENSCGRG00000017603	Srrm1	100	98.144	ENSMAUG00000015705	Srrm1	99	98.144	Mesocricetus_auratus
ENSCGRG00000017603	Srrm1	100	97.817	MGP_CAROLIEiJ_G0026636	Srrm1	99	97.817	Mus_caroli
ENSCGRG00000017603	Srrm1	100	97.380	ENSMUSG00000028809	Srrm1	99	97.380	Mus_musculus
ENSCGRG00000017603	Srrm1	100	97.705	MGP_PahariEiJ_G0028969	Srrm1	99	97.705	Mus_pahari
ENSCGRG00000017603	Srrm1	100	97.707	MGP_SPRETEiJ_G0027616	Srrm1	99	97.707	Mus_spretus
ENSCGRG00000017603	Srrm1	100	96.393	ENSNGAG00000014562	Srrm1	99	96.393	Nannospalax_galili
ENSCGRG00000017603	Srrm1	54	97.125	ENSNLEG00000008966	SRRM1	92	97.125	Nomascus_leucogenys
ENSCGRG00000017603	Srrm1	76	77.714	ENSMEUG00000014704	SRRM1	54	87.037	Notamacropus_eugenii
ENSCGRG00000017603	Srrm1	92	96.200	ENSOARG00000006453	SRRM1	98	96.200	Ovis_aries
ENSCGRG00000017603	Srrm1	100	98.033	ENSPEMG00000006254	Srrm1	99	98.033	Peromyscus_maniculatus_bairdii
ENSCGRG00000017603	Srrm1	100	97.447	ENSRNOG00000018194	Srrm1	99	97.447	Rattus_norvegicus
ENSCGRG00000017603	Srrm1	89	93.622	ENSSBOG00000019884	SRRM1	99	96.162	Saimiri_boliviensis_boliviensis
ENSCGRG00000017603	Srrm1	60	89.836	ENSSARG00000013718	SRRM1	60	89.836	Sorex_araneus