EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00000017732 (Gene tree)
Gene ID: -
Gene Symbol: Trmt1
Alias: 6720406L13Rik|D8Ertd812e
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Minus strand
Length: 12782 bases
Position: chrJH000286.1:539810-552591
Accession: 100765046
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000024461	zf-CCCH	PF00642.24	6.2e-07	1	1
ENSCGRP00000024460	zf-CCCH	PF00642.24	6.6e-07	1	1
ENSCGRP00000024460	TRM	PF02005.16	1.8e-148	1	1
ENSCGRP00000024461	TRM	PF02005.16	2.1e-139	1	1
ENSCGRP00000024461	Met_10	PF02475.16	3.6e-06	1	1
ENSCGRP00000024460	Met_10	PF02475.16	3.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000024791	-	2698	XM_003501925	ENSCGRP00000024460	663 (aa)	XP_003501973	UPI00022F4833
ENSCGRT00000024792	-	1905	-	ENSCGRP00000024461	634 (aa)	-	-

Gene Model

Click here to download ENSCGRG00000017732's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000017732's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000017732	Trmt1	96	85.086	ENSG00000104907	TRMT1	100	91.623	Homo_sapiens
ENSCGRG00000017732	Trmt1	100	81.982	ENSAMEG00000012598	TRMT1	99	81.982	Ailuropoda_melanoleuca
ENSCGRG00000017732	Trmt1	89	57.550	ENSACIG00000018680	trmt1	91	57.550	Amphilophus_citrinellus
ENSCGRG00000017732	Trmt1	88	64.736	ENSAOCG00000006781	trmt1	87	64.566	Amphiprion_ocellaris
ENSCGRG00000017732	Trmt1	88	64.736	ENSAPEG00000007712	trmt1	87	64.566	Amphiprion_percula
ENSCGRG00000017732	Trmt1	86	67.544	ENSATEG00000001872	trmt1	84	67.544	Anabas_testudineus
ENSCGRG00000017732	Trmt1	91	65.397	ENSACAG00000003825	TRMT1	96	65.066	Anolis_carolinensis
ENSCGRG00000017732	Trmt1	96	80.901	ENSANAG00000023016	TRMT1	98	84.046	Aotus_nancymaae
ENSCGRG00000017732	Trmt1	86	64.789	ENSACLG00000010073	trmt1	91	64.789	Astatotilapia_calliptera
ENSCGRG00000017732	Trmt1	86	66.028	ENSAMXG00000012026	trmt1	85	66.318	Astyanax_mexicanus
ENSCGRG00000017732	Trmt1	99	82.371	ENSBTAG00000019325	TRMT1	94	82.371	Bos_taurus
ENSCGRG00000017732	Trmt1	77	41.524	WBGene00006613	trm-1	93	41.524	Caenorhabditis_elegans
ENSCGRG00000017732	Trmt1	96	80.125	ENSCJAG00000004566	TRMT1	98	80.125	Callithrix_jacchus
ENSCGRG00000017732	Trmt1	100	82.583	ENSCAFG00000017070	TRMT1	99	84.434	Canis_familiaris
ENSCGRG00000017732	Trmt1	100	82.732	ENSCAFG00020005397	TRMT1	100	82.732	Canis_lupus_dingo
ENSCGRG00000017732	Trmt1	99	82.246	ENSCHIG00000013569	TRMT1	99	82.246	Capra_hircus
ENSCGRG00000017732	Trmt1	96	78.538	ENSTSYG00000003207	TRMT1	99	77.492	Carlito_syrichta
ENSCGRG00000017732	Trmt1	84	78.636	ENSCAPG00000003355	TRMT1	98	78.636	Cavia_aperea
ENSCGRG00000017732	Trmt1	98	80.556	ENSCPOG00000011754	TRMT1	98	80.556	Cavia_porcellus
ENSCGRG00000017732	Trmt1	95	81.157	ENSCCAG00000022263	TRMT1	98	83.333	Cebus_capucinus
ENSCGRG00000017732	Trmt1	100	83.008	ENSCATG00000039850	TRMT1	100	83.008	Cercocebus_atys
ENSCGRG00000017732	Trmt1	83	71.036	ENSCATG00000038220	-	97	71.036	Cercocebus_atys
ENSCGRG00000017732	Trmt1	97	82.582	ENSCLAG00000015295	TRMT1	95	82.582	Chinchilla_lanigera
ENSCGRG00000017732	Trmt1	80	84.906	ENSCSAG00000006500	TRMT1	100	84.906	Chlorocebus_sabaeus
ENSCGRG00000017732	Trmt1	90	66.019	ENSCPBG00000023866	TRMT1	92	66.181	Chrysemys_picta_bellii
ENSCGRG00000017732	Trmt1	84	46.261	ENSCING00000002884	-	98	46.892	Ciona_intestinalis
ENSCGRG00000017732	Trmt1	83	46.920	ENSCSAVG00000010927	-	99	46.055	Ciona_savignyi
ENSCGRG00000017732	Trmt1	94	65.008	ENSCANG00000031650	-	98	64.130	Colobus_angolensis_palliatus
ENSCGRG00000017732	Trmt1	98	67.381	ENSCANG00000040631	TRMT1	99	67.381	Colobus_angolensis_palliatus
ENSCGRG00000017732	Trmt1	100	100.000	ENSCGRG00001022594	Trmt1	100	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000017732	Trmt1	86	66.021	ENSCSEG00000001643	trmt1	83	67.451	Cynoglossus_semilaevis
ENSCGRG00000017732	Trmt1	86	67.135	ENSCVAG00000011886	trmt1	85	67.135	Cyprinodon_variegatus
ENSCGRG00000017732	Trmt1	86	65.052	ENSDARG00000010978	trmt1	85	64.522	Danio_rerio
ENSCGRG00000017732	Trmt1	84	57.829	ENSDNOG00000048240	-	95	57.829	Dasypus_novemcinctus
ENSCGRG00000017732	Trmt1	99	79.909	ENSDORG00000014298	Trmt1	99	79.909	Dipodomys_ordii
ENSCGRG00000017732	Trmt1	77	47.969	FBgn0032430	CG6388	87	47.582	Drosophila_melanogaster
ENSCGRG00000017732	Trmt1	56	76.207	ENSETEG00000015483	-	54	76.207	Echinops_telfairi
ENSCGRG00000017732	Trmt1	78	52.998	ENSEBUG00000003449	trmt1	75	53.939	Eptatretus_burgeri
ENSCGRG00000017732	Trmt1	92	83.252	ENSEASG00005004050	TRMT1	99	81.918	Equus_asinus_asinus
ENSCGRG00000017732	Trmt1	92	83.577	ENSECAG00000016149	TRMT1	99	82.233	Equus_caballus
ENSCGRG00000017732	Trmt1	60	69.521	ENSEEUG00000014102	-	100	69.521	Erinaceus_europaeus
ENSCGRG00000017732	Trmt1	90	61.688	ENSELUG00000021659	trmt1	91	61.475	Esox_lucius
ENSCGRG00000017732	Trmt1	99	82.398	ENSFCAG00000000483	TRMT1	99	82.398	Felis_catus
ENSCGRG00000017732	Trmt1	99	79.430	ENSFDAG00000007386	TRMT1	100	79.430	Fukomys_damarensis
ENSCGRG00000017732	Trmt1	88	63.605	ENSFHEG00000012865	trmt1	90	66.851	Fundulus_heteroclitus
ENSCGRG00000017732	Trmt1	86	60.209	ENSGMOG00000006564	trmt1	98	60.279	Gadus_morhua
ENSCGRG00000017732	Trmt1	89	65.901	ENSGAFG00000011862	trmt1	92	65.210	Gambusia_affinis
ENSCGRG00000017732	Trmt1	94	59.646	ENSGACG00000000227	trmt1	99	59.551	Gasterosteus_aculeatus
ENSCGRG00000017732	Trmt1	89	66.777	ENSGAGG00000016432	TRMT1	89	66.777	Gopherus_agassizii
ENSCGRG00000017732	Trmt1	96	85.243	ENSGGOG00000014007	TRMT1	99	83.739	Gorilla_gorilla
ENSCGRG00000017732	Trmt1	85	58.053	ENSHBUG00000008821	trmt1	93	57.522	Haplochromis_burtoni
ENSCGRG00000017732	Trmt1	98	81.510	ENSHGLG00000015972	TRMT1	99	81.510	Heterocephalus_glaber_female
ENSCGRG00000017732	Trmt1	98	76.613	ENSHGLG00100018112	TRMT1	99	76.462	Heterocephalus_glaber_male
ENSCGRG00000017732	Trmt1	89	61.616	ENSHCOG00000009447	trmt1	91	61.616	Hippocampus_comes
ENSCGRG00000017732	Trmt1	88	63.712	ENSIPUG00000002899	trmt1	86	64.262	Ictalurus_punctatus
ENSCGRG00000017732	Trmt1	100	83.359	ENSSTOG00000012531	TRMT1	100	83.359	Ictidomys_tridecemlineatus
ENSCGRG00000017732	Trmt1	94	82.500	ENSJJAG00000017154	Trmt1	100	80.063	Jaculus_jaculus
ENSCGRG00000017732	Trmt1	88	65.646	ENSKMAG00000011809	trmt1	97	64.346	Kryptolebias_marmoratus
ENSCGRG00000017732	Trmt1	86	66.257	ENSLBEG00000012703	trmt1	83	66.257	Labrus_bergylta
ENSCGRG00000017732	Trmt1	86	57.068	ENSLACG00000014585	TRMT1	93	56.894	Latimeria_chalumnae
ENSCGRG00000017732	Trmt1	86	59.794	ENSLOCG00000006479	trmt1	97	60.554	Lepisosteus_oculatus
ENSCGRG00000017732	Trmt1	97	82.407	ENSLAFG00000014072	TRMT1	99	82.407	Loxodonta_africana
ENSCGRG00000017732	Trmt1	100	83.308	ENSMFAG00000033143	TRMT1	100	83.308	Macaca_fascicularis
ENSCGRG00000017732	Trmt1	99	79.014	ENSMMUG00000001167	TRMT1	100	79.014	Macaca_mulatta
ENSCGRG00000017732	Trmt1	100	83.308	ENSMNEG00000037867	TRMT1	100	83.308	Macaca_nemestrina
ENSCGRG00000017732	Trmt1	99	82.675	ENSMLEG00000016142	TRMT1	99	82.675	Mandrillus_leucophaeus
ENSCGRG00000017732	Trmt1	91	64.735	ENSMAMG00000004357	trmt1	89	64.735	Mastacembelus_armatus
ENSCGRG00000017732	Trmt1	86	65.026	ENSMZEG00005014510	trmt1	85	65.141	Maylandia_zebra
ENSCGRG00000017732	Trmt1	98	92.923	ENSMAUG00000011134	Trmt1	100	92.481	Mesocricetus_auratus
ENSCGRG00000017732	Trmt1	100	82.733	ENSMICG00000000793	TRMT1	100	82.733	Microcebus_murinus
ENSCGRG00000017732	Trmt1	98	91.538	ENSMOCG00000015895	Trmt1	100	90.977	Microtus_ochrogaster
ENSCGRG00000017732	Trmt1	86	65.141	ENSMMOG00000011097	trmt1	91	64.789	Mola_mola
ENSCGRG00000017732	Trmt1	91	75.908	ENSMODG00000011619	TRMT1	98	75.908	Monodelphis_domestica
ENSCGRG00000017732	Trmt1	100	89.023	MGP_CAROLIEiJ_G0031304	Trmt1	100	89.023	Mus_caroli
ENSCGRG00000017732	Trmt1	100	88.421	ENSMUSG00000001909	Trmt1	100	88.421	Mus_musculus
ENSCGRG00000017732	Trmt1	100	88.421	MGP_SPRETEiJ_G0032422	Trmt1	100	88.421	Mus_spretus
ENSCGRG00000017732	Trmt1	100	82.132	ENSMPUG00000004210	TRMT1	95	82.132	Mustela_putorius_furo
ENSCGRG00000017732	Trmt1	100	81.832	ENSMLUG00000012809	TRMT1	99	81.832	Myotis_lucifugus
ENSCGRG00000017732	Trmt1	100	82.784	ENSNGAG00000022486	Trmt1	100	82.784	Nannospalax_galili
ENSCGRG00000017732	Trmt1	74	68.657	ENSNBRG00000024376	trmt1	84	68.657	Neolamprologus_brichardi
ENSCGRG00000017732	Trmt1	81	85.311	ENSNLEG00000013019	-	99	81.737	Nomascus_leucogenys
ENSCGRG00000017732	Trmt1	90	74.916	ENSMEUG00000013756	TRMT1	100	74.916	Notamacropus_eugenii
ENSCGRG00000017732	Trmt1	77	86.571	ENSOPRG00000009471	-	78	86.571	Ochotona_princeps
ENSCGRG00000017732	Trmt1	98	81.818	ENSODEG00000010323	TRMT1	99	81.818	Octodon_degus
ENSCGRG00000017732	Trmt1	90	64.833	ENSONIG00000000400	trmt1	96	64.833	Oreochromis_niloticus
ENSCGRG00000017732	Trmt1	79	83.743	ENSOCUG00000021934	TRMT1	99	83.743	Oryctolagus_cuniculus
ENSCGRG00000017732	Trmt1	86	61.996	ENSORLG00000020074	trmt1	89	61.938	Oryzias_latipes
ENSCGRG00000017732	Trmt1	86	65.026	ENSORLG00020007561	trmt1	89	64.965	Oryzias_latipes_hni
ENSCGRG00000017732	Trmt1	86	65.378	ENSORLG00015006547	trmt1	86	65.378	Oryzias_latipes_hsok
ENSCGRG00000017732	Trmt1	86	65.378	ENSOMEG00000019343	trmt1	86	65.378	Oryzias_melastigma
ENSCGRG00000017732	Trmt1	95	81.329	ENSOGAG00000025576	TRMT1	99	81.171	Otolemur_garnettii
ENSCGRG00000017732	Trmt1	99	70.458	ENSOARG00000009397	TRMT1	93	69.814	Ovis_aries
ENSCGRG00000017732	Trmt1	98	75.191	ENSPPRG00000012117	TRMT1	99	75.191	Panthera_pardus
ENSCGRG00000017732	Trmt1	80	83.891	ENSPTIG00000008833	TRMT1	96	83.891	Panthera_tigris_altaica
ENSCGRG00000017732	Trmt1	96	63.750	ENSPTRG00000050421	-	98	63.750	Pan_troglodytes
ENSCGRG00000017732	Trmt1	96	84.929	ENSPTRG00000010557	TRMT1	99	83.435	Pan_troglodytes
ENSCGRG00000017732	Trmt1	99	83.492	ENSPANG00000009247	TRMT1	99	83.492	Papio_anubis
ENSCGRG00000017732	Trmt1	83	71.069	ENSPANG00000034058	-	95	71.069	Papio_anubis
ENSCGRG00000017732	Trmt1	88	66.038	ENSPKIG00000005309	trmt1	85	65.636	Paramormyrops_kingsleyae
ENSCGRG00000017732	Trmt1	91	57.686	ENSPSIG00000008762	TRMT1	92	55.763	Pelodiscus_sinensis
ENSCGRG00000017732	Trmt1	86	64.098	ENSPMGG00000019764	trmt1	90	64.098	Periophthalmus_magnuspinnatus
ENSCGRG00000017732	Trmt1	98	93.237	ENSPEMG00000016247	Trmt1	100	92.767	Peromyscus_maniculatus_bairdii
ENSCGRG00000017732	Trmt1	87	59.483	ENSPMAG00000004329	trmt1	91	59.483	Petromyzon_marinus
ENSCGRG00000017732	Trmt1	94	72.397	ENSPCIG00000019273	TRMT1	98	72.397	Phascolarctos_cinereus
ENSCGRG00000017732	Trmt1	89	66.387	ENSPFOG00000008527	trmt1	91	66.050	Poecilia_formosa
ENSCGRG00000017732	Trmt1	89	65.882	ENSPLAG00000018788	trmt1	92	67.276	Poecilia_latipinna
ENSCGRG00000017732	Trmt1	87	67.526	ENSPMEG00000013120	trmt1	89	67.182	Poecilia_mexicana
ENSCGRG00000017732	Trmt1	95	62.893	ENSPREG00000000211	trmt1	92	62.579	Poecilia_reticulata
ENSCGRG00000017732	Trmt1	96	85.086	ENSPPYG00000009622	TRMT1	99	83.587	Pongo_abelii
ENSCGRG00000017732	Trmt1	97	75.809	ENSPCAG00000003698	TRMT1	99	75.809	Procavia_capensis
ENSCGRG00000017732	Trmt1	99	82.512	ENSPCOG00000008653	TRMT1	97	84.772	Propithecus_coquereli
ENSCGRG00000017732	Trmt1	99	81.639	ENSPVAG00000015076	TRMT1	99	81.639	Pteropus_vampyrus
ENSCGRG00000017732	Trmt1	86	63.204	ENSPNYG00000013960	trmt1	91	63.204	Pundamilia_nyererei
ENSCGRG00000017732	Trmt1	76	82.759	ENSPNAG00000024859	trmt1	88	82.759	Pygocentrus_nattereri
ENSCGRG00000017732	Trmt1	96	89.202	ENSRNOG00000002914	Trmt1	99	89.202	Rattus_norvegicus
ENSCGRG00000017732	Trmt1	100	82.857	ENSRBIG00000038324	TRMT1	100	82.857	Rhinopithecus_bieti
ENSCGRG00000017732	Trmt1	94	66.613	ENSRBIG00000037505	-	99	65.688	Rhinopithecus_bieti
ENSCGRG00000017732	Trmt1	100	83.008	ENSRROG00000028599	TRMT1	100	83.008	Rhinopithecus_roxellana
ENSCGRG00000017732	Trmt1	94	65.815	ENSRROG00000031847	-	98	64.915	Rhinopithecus_roxellana
ENSCGRG00000017732	Trmt1	77	37.127	YDR120C	-	92	37.313	Saccharomyces_cerevisiae
ENSCGRG00000017732	Trmt1	94	81.636	ENSSBOG00000028861	TRMT1	98	82.838	Saimiri_boliviensis_boliviensis
ENSCGRG00000017732	Trmt1	88	76.792	ENSSHAG00000014381	TRMT1	97	76.119	Sarcophilus_harrisii
ENSCGRG00000017732	Trmt1	86	67.075	ENSSFOG00015004139	trmt1	83	66.608	Scleropages_formosus
ENSCGRG00000017732	Trmt1	86	65.559	ENSSMAG00000021136	trmt1	85	65.499	Scophthalmus_maximus
ENSCGRG00000017732	Trmt1	87	65.292	ENSSDUG00000012740	trmt1	86	65.292	Seriola_dumerili
ENSCGRG00000017732	Trmt1	87	65.120	ENSSLDG00000005971	trmt1	86	65.120	Seriola_lalandi_dorsalis
ENSCGRG00000017732	Trmt1	85	80.106	ENSSARG00000005138	TRMT1	100	79.577	Sorex_araneus
ENSCGRG00000017732	Trmt1	86	54.276	ENSSPUG00000001084	TRMT1	89	53.927	Sphenodon_punctatus
ENSCGRG00000017732	Trmt1	90	62.814	ENSSPAG00000007153	trmt1	98	62.814	Stegastes_partitus
ENSCGRG00000017732	Trmt1	94	84.738	ENSSSCG00000013744	TRMT1	99	84.738	Sus_scrofa
ENSCGRG00000017732	Trmt1	90	60.362	ENSTRUG00000010700	trmt1	91	60.197	Takifugu_rubripes
ENSCGRG00000017732	Trmt1	88	63.373	ENSTNIG00000018808	trmt1	100	63.203	Tetraodon_nigroviridis
ENSCGRG00000017732	Trmt1	97	80.620	ENSTTRG00000006379	TRMT1	99	80.213	Tursiops_truncatus
ENSCGRG00000017732	Trmt1	97	83.279	ENSUAMG00000022911	TRMT1	99	82.753	Ursus_americanus
ENSCGRG00000017732	Trmt1	95	83.861	ENSUMAG00000006027	TRMT1	99	83.861	Ursus_maritimus
ENSCGRG00000017732	Trmt1	100	82.583	ENSVVUG00000024177	TRMT1	100	82.583	Vulpes_vulpes
ENSCGRG00000017732	Trmt1	71	69.198	ENSXETG00000033863	TRMT1	94	69.198	Xenopus_tropicalis
ENSCGRG00000017732	Trmt1	86	67.838	ENSXCOG00000015733	trmt1	87	67.606	Xiphophorus_couchianus
ENSCGRG00000017732	Trmt1	86	67.838	ENSXMAG00000013823	trmt1	97	67.663	Xiphophorus_maculatus