EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000017894 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: nucleolin
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Minus strand
Length: 9378 bases
Position: chrJH002341.1:12187-21564
Accession: 100689056
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000024692	RRM_1	PF00076.22	2.1e-59	1	4
ENSCGRP00000024692	RRM_1	PF00076.22	2.1e-59	2	4
ENSCGRP00000024692	RRM_1	PF00076.22	2.1e-59	3	4
ENSCGRP00000024692	RRM_1	PF00076.22	2.1e-59	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000025025	-	2094	XM_007653721	ENSCGRP00000024692	697 (aa)	XP_007651911	-

Gene Model

Click here to download ENSCGRG00000017894's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000017894's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000017894	-	53	33.071	ENSCGRG00000017323	Tial1	62	32.061
ENSCGRG00000017894	-	89	76.603	ENSCGRG00000000507	-	86	75.935

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000017894	-	88	81.566	ENSG00000115053	NCL	93	84.000	Homo_sapiens
ENSCGRG00000017894	-	54	88.654	ENSAMEG00000016289	NCL	85	82.334	Ailuropoda_melanoleuca
ENSCGRG00000017894	-	88	79.805	ENSANAG00000035814	-	85	82.927	Aotus_nancymaae
ENSCGRG00000017894	-	98	63.504	ENSANAG00000024378	-	73	81.443	Aotus_nancymaae
ENSCGRG00000017894	-	97	76.744	ENSBTAG00000016174	NCL	88	79.615	Bos_taurus
ENSCGRG00000017894	-	88	86.420	ENSBTAG00000050728	-	79	86.420	Bos_taurus
ENSCGRG00000017894	-	90	87.619	ENSBTAG00000051320	-	77	87.324	Bos_taurus
ENSCGRG00000017894	-	88	78.502	ENSCJAG00000013538	NCL	85	83.415	Callithrix_jacchus
ENSCGRG00000017894	-	88	81.922	ENSCAFG00000011037	NCL	85	81.199	Canis_familiaris
ENSCGRG00000017894	-	87	81.683	ENSCAFG00020023145	NCL	89	80.952	Canis_lupus_dingo
ENSCGRG00000017894	-	89	60.194	ENSCHIG00000012143	-	86	68.013	Capra_hircus
ENSCGRG00000017894	-	91	71.719	ENSCHIG00000026149	-	86	75.244	Capra_hircus
ENSCGRG00000017894	-	87	78.630	ENSCHIG00000010894	-	91	80.813	Capra_hircus
ENSCGRG00000017894	-	77	92.070	ENSCHIG00000021052	-	72	92.070	Capra_hircus
ENSCGRG00000017894	-	69	77.083	ENSTSYG00000036886	-	85	70.310	Carlito_syrichta
ENSCGRG00000017894	-	90	76.909	ENSTSYG00000029779	-	90	77.963	Carlito_syrichta
ENSCGRG00000017894	-	88	81.169	ENSTSYG00000004355	-	85	81.169	Carlito_syrichta
ENSCGRG00000017894	-	54	83.113	ENSCAPG00000009405	NCL	86	77.706	Cavia_aperea
ENSCGRG00000017894	-	54	88.127	ENSCPOG00000001034	NCL	86	80.775	Cavia_porcellus
ENSCGRG00000017894	-	66	86.935	ENSCCAG00000000551	-	93	87.065	Cebus_capucinus
ENSCGRG00000017894	-	54	89.182	ENSCCAG00000021040	-	85	81.789	Cebus_capucinus
ENSCGRG00000017894	-	88	83.687	ENSCATG00000037033	NCL	85	83.687	Cercocebus_atys
ENSCGRG00000017894	-	88	81.422	ENSCLAG00000013080	NCL	85	80.775	Chinchilla_lanigera
ENSCGRG00000017894	-	54	88.947	ENSCSAG00000006660	NCL	82	88.918	Chlorocebus_sabaeus
ENSCGRG00000017894	-	63	70.455	ENSCHOG00000012860	NCL	88	69.615	Choloepus_hoffmanni
ENSCGRG00000017894	-	100	98.567	ENSCGRG00001024315	-	97	98.567	Cricetulus_griseus_chok1gshd
ENSCGRG00000017894	-	89	79.006	ENSCGRG00001022350	-	88	79.187	Cricetulus_griseus_chok1gshd
ENSCGRG00000017894	-	88	79.806	ENSDNOG00000010783	-	85	79.708	Dasypus_novemcinctus
ENSCGRG00000017894	-	88	71.359	ENSDNOG00000046347	-	85	71.057	Dasypus_novemcinctus
ENSCGRG00000017894	-	52	77.260	ENSDORG00000023596	-	86	70.915	Dipodomys_ordii
ENSCGRG00000017894	-	54	87.831	ENSDORG00000012513	-	85	79.412	Dipodomys_ordii
ENSCGRG00000017894	-	69	60.326	ENSETEG00000008139	-	82	60.163	Echinops_telfairi
ENSCGRG00000017894	-	63	57.175	ENSETEG00000008553	-	88	57.336	Echinops_telfairi
ENSCGRG00000017894	-	54	83.820	ENSETEG00000014756	-	86	83.905	Echinops_telfairi
ENSCGRG00000017894	-	54	84.433	ENSETEG00000018937	-	85	76.672	Echinops_telfairi
ENSCGRG00000017894	-	88	80.195	ENSEASG00005008488	NCL	80	88.654	Equus_asinus_asinus
ENSCGRG00000017894	-	88	81.006	ENSECAG00000021868	NCL	85	81.613	Equus_caballus
ENSCGRG00000017894	-	88	77.124	ENSEEUG00000005913	NCL	85	76.509	Erinaceus_europaeus
ENSCGRG00000017894	-	88	83.089	ENSFCAG00000027622	NCL	85	82.848	Felis_catus
ENSCGRG00000017894	-	88	82.792	ENSFDAG00000014291	NCL	86	81.818	Fukomys_damarensis
ENSCGRG00000017894	-	88	80.914	ENSGGOG00000004300	NCL	85	83.197	Gorilla_gorilla
ENSCGRG00000017894	-	88	83.252	ENSHGLG00000002031	-	85	82.276	Heterocephalus_glaber_female
ENSCGRG00000017894	-	88	73.203	ENSHGLG00000011069	-	85	72.964	Heterocephalus_glaber_female
ENSCGRG00000017894	-	88	82.114	ENSHGLG00100014537	-	85	81.626	Heterocephalus_glaber_male
ENSCGRG00000017894	-	68	80.533	ENSHGLG00100000745	-	85	74.490	Heterocephalus_glaber_male
ENSCGRG00000017894	-	54	85.979	ENSJJAG00000016165	Ncl	86	82.680	Jaculus_jaculus
ENSCGRG00000017894	-	88	67.472	ENSLAFG00000013061	NCL	85	66.775	Loxodonta_africana
ENSCGRG00000017894	-	88	83.197	ENSMFAG00000040385	NCL	85	83.361	Macaca_fascicularis
ENSCGRG00000017894	-	78	94.091	ENSMMUG00000018094	NCL	85	83.361	Macaca_mulatta
ENSCGRG00000017894	-	78	94.091	ENSMNEG00000023839	NCL	80	87.854	Macaca_nemestrina
ENSCGRG00000017894	-	88	83.524	ENSMLEG00000028935	NCL	85	83.524	Mandrillus_leucophaeus
ENSCGRG00000017894	-	88	80.587	ENSMICG00000002538	-	85	81.759	Microcebus_murinus
ENSCGRG00000017894	-	88	65.478	ENSMICG00000029975	-	76	78.125	Microcebus_murinus
ENSCGRG00000017894	-	88	85.366	MGP_CAROLIEiJ_G0014362	Ncl	85	85.318	Mus_caroli
ENSCGRG00000017894	-	88	86.667	ENSMUSG00000026234	Ncl	85	86.623	Mus_musculus
ENSCGRG00000017894	-	88	86.224	MGP_PahariEiJ_G0027599	Ncl	85	86.667	Mus_pahari
ENSCGRG00000017894	-	88	85.390	MGP_SPRETEiJ_G0015164	Ncl	85	86.319	Mus_spretus
ENSCGRG00000017894	-	88	78.803	ENSMLUG00000014547	NCL	85	78.675	Myotis_lucifugus
ENSCGRG00000017894	-	88	87.097	ENSNGAG00000002454	-	85	87.419	Nannospalax_galili
ENSCGRG00000017894	-	88	69.801	ENSNLEG00000014107	-	85	72.101	Nomascus_leucogenys
ENSCGRG00000017894	-	55	84.416	ENSODEG00000003281	-	86	77.564	Octodon_degus
ENSCGRG00000017894	-	75	61.905	ENSODEG00000007803	-	83	62.095	Octodon_degus
ENSCGRG00000017894	-	65	85.366	ENSODEG00000002748	-	85	74.129	Octodon_degus
ENSCGRG00000017894	-	90	72.727	ENSOCUG00000004312	NCL	86	72.089	Oryctolagus_cuniculus
ENSCGRG00000017894	-	61	82.058	ENSOGAG00000027852	NCL	76	82.058	Otolemur_garnettii
ENSCGRG00000017894	-	85	73.927	ENSOARG00000020709	-	86	74.038	Ovis_aries
ENSCGRG00000017894	-	82	62.676	ENSOARG00000013270	-	89	62.329	Ovis_aries
ENSCGRG00000017894	-	88	71.078	ENSOARG00000013710	-	94	72.431	Ovis_aries
ENSCGRG00000017894	-	55	73.575	ENSOARG00000004072	-	92	65.416	Ovis_aries
ENSCGRG00000017894	-	88	81.892	ENSPPAG00000011619	NCL	85	83.687	Pan_paniscus
ENSCGRG00000017894	-	88	82.899	ENSPPRG00000012603	NCL	85	81.361	Panthera_pardus
ENSCGRG00000017894	-	88	82.736	ENSPTIG00000010393	NCL	85	81.199	Panthera_tigris_altaica
ENSCGRG00000017894	-	88	82.708	ENSPTRG00000013025	NCL	85	83.034	Pan_troglodytes
ENSCGRG00000017894	-	88	83.197	ENSPANG00000010292	NCL	85	83.361	Papio_anubis
ENSCGRG00000017894	-	88	75.362	ENSPPYG00000013265	NCL	85	77.617	Pongo_abelii
ENSCGRG00000017894	-	89	76.320	ENSPCOG00000004160	-	89	75.758	Propithecus_coquereli
ENSCGRG00000017894	-	88	82.955	ENSPCOG00000003051	-	85	82.305	Propithecus_coquereli
ENSCGRG00000017894	-	88	80.032	ENSPVAG00000000297	NCL	85	79.612	Pteropus_vampyrus
ENSCGRG00000017894	-	88	86.753	ENSRNOG00000018273	Ncl	85	88.006	Rattus_norvegicus
ENSCGRG00000017894	-	88	78.956	ENSRBIG00000037525	-	85	79.119	Rhinopithecus_bieti
ENSCGRG00000017894	-	91	78.333	ENSRROG00000036103	-	92	79.304	Rhinopithecus_roxellana
ENSCGRG00000017894	-	88	82.219	ENSRROG00000028756	-	85	83.524	Rhinopithecus_roxellana
ENSCGRG00000017894	-	53	72.936	ENSSBOG00000023094	-	76	73.182	Saimiri_boliviensis_boliviensis
ENSCGRG00000017894	-	88	82.085	ENSSBOG00000029193	-	85	84.039	Saimiri_boliviensis_boliviensis
ENSCGRG00000017894	-	63	78.829	ENSSBOG00000027549	-	84	74.267	Saimiri_boliviensis_boliviensis
ENSCGRG00000017894	-	88	79.388	ENSSSCG00000016275	NCL	85	79.388	Sus_scrofa
ENSCGRG00000017894	-	56	76.517	ENSTBEG00000001546	-	85	73.659	Tupaia_belangeri
ENSCGRG00000017894	-	62	74.684	ENSTBEG00000002469	-	63	74.684	Tupaia_belangeri
ENSCGRG00000017894	-	88	79.675	ENSTTRG00000009094	NCL	85	79.675	Tursiops_truncatus
ENSCGRG00000017894	-	88	71.382	ENSUAMG00000005639	NCL	88	85.553	Ursus_americanus
ENSCGRG00000017894	-	54	88.918	ENSUMAG00000015789	NCL	85	81.331	Ursus_maritimus
ENSCGRG00000017894	-	66	84.685	ENSVPAG00000001796	NCL	65	84.685	Vicugna_pacos
ENSCGRG00000017894	-	88	79.058	ENSVVUG00000025564	NCL	85	78.084	Vulpes_vulpes