EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00000017993 (Gene tree)
Gene ID: -
Gene Symbol: Upf2
Alias: -
Full Name: UPF2%2C regulator of nonsense mediated mRNA decay
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Minus strand
Length: 106219 bases
Position: chrJH000042.1:1246563-1352781
Accession: 100771546
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000024838	Upf2	PF04050.14	7.2e-33	1	1
ENSCGRP00000024839	Upf2	PF04050.14	7.2e-33	1	1
ENSCGRP00000024840	Upf2	PF04050.14	7.2e-33	1	1
ENSCGRP00000024838	MIF4G	PF02854.19	4e-76	1	3
ENSCGRP00000024838	MIF4G	PF02854.19	4e-76	2	3
ENSCGRP00000024838	MIF4G	PF02854.19	4e-76	3	3
ENSCGRP00000024839	MIF4G	PF02854.19	4e-76	1	3
ENSCGRP00000024839	MIF4G	PF02854.19	4e-76	2	3
ENSCGRP00000024839	MIF4G	PF02854.19	4e-76	3	3
ENSCGRP00000024840	MIF4G	PF02854.19	4e-76	1	3
ENSCGRP00000024840	MIF4G	PF02854.19	4e-76	2	3
ENSCGRP00000024840	MIF4G	PF02854.19	4e-76	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000025176	-	4777	XM_007649766	ENSCGRP00000024840	1269 (aa)	XP_007638148	UPI00022F36CA
ENSCGRT00000025175	-	4966	XM_007649764	ENSCGRP00000024839	1269 (aa)	XP_007638148	UPI00022F36CA
ENSCGRT00000025174	-	6356	-	ENSCGRP00000024838	1269 (aa)	XP_007638148	UPI00022F36CA

Gene Model

Click here to download ENSCGRG00000017993's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000017993's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000017993	Upf2	100	97.327	ENSG00000151461	UPF2	100	97.327	Homo_sapiens
ENSCGRG00000017993	Upf2	99	78.605	ENSAPOG00000015837	UPF2	100	78.448	Acanthochromis_polyacanthus
ENSCGRG00000017993	Upf2	100	98.190	ENSAMEG00000004586	UPF2	100	98.190	Ailuropoda_melanoleuca
ENSCGRG00000017993	Upf2	99	82.252	ENSACIG00000018078	UPF2	100	82.174	Amphilophus_citrinellus
ENSCGRG00000017993	Upf2	100	82.605	ENSAOCG00000016766	UPF2	100	82.605	Amphiprion_ocellaris
ENSCGRG00000017993	Upf2	100	82.683	ENSAPEG00000019084	UPF2	100	82.761	Amphiprion_percula
ENSCGRG00000017993	Upf2	100	82.426	ENSATEG00000021677	UPF2	99	82.399	Anabas_testudineus
ENSCGRG00000017993	Upf2	100	87.175	ENSAPLG00000010287	UPF2	90	91.652	Anas_platyrhynchos
ENSCGRG00000017993	Upf2	100	92.211	ENSACAG00000009259	UPF2	100	91.896	Anolis_carolinensis
ENSCGRG00000017993	Upf2	99	87.333	ENSANAG00000028451	UPF2	99	85.759	Aotus_nancymaae
ENSCGRG00000017993	Upf2	100	80.562	ENSACLG00000012696	UPF2	100	82.436	Astatotilapia_calliptera
ENSCGRG00000017993	Upf2	99	83.477	ENSAMXG00000013700	UPF2	99	83.555	Astyanax_mexicanus
ENSCGRG00000017993	Upf2	100	97.876	ENSBTAG00000000288	UPF2	100	97.876	Bos_taurus
ENSCGRG00000017993	Upf2	100	97.406	ENSCJAG00000020685	UPF2	100	97.406	Callithrix_jacchus
ENSCGRG00000017993	Upf2	100	98.269	ENSCAFG00000004839	UPF2	100	98.269	Canis_familiaris
ENSCGRG00000017993	Upf2	99	95.978	ENSCAFG00020005882	UPF2	100	95.978	Canis_lupus_dingo
ENSCGRG00000017993	Upf2	100	97.954	ENSCHIG00000020359	UPF2	100	97.954	Capra_hircus
ENSCGRG00000017993	Upf2	100	97.168	ENSTSYG00000000935	UPF2	100	97.168	Carlito_syrichta
ENSCGRG00000017993	Upf2	91	86.231	ENSCAPG00000016658	UPF2	94	86.281	Cavia_aperea
ENSCGRG00000017993	Upf2	99	96.117	ENSCPOG00000008809	UPF2	100	96.117	Cavia_porcellus
ENSCGRG00000017993	Upf2	100	89.614	ENSCCAG00000035991	UPF2	100	90.795	Cebus_capucinus
ENSCGRG00000017993	Upf2	100	97.563	ENSCATG00000032679	UPF2	100	97.563	Cercocebus_atys
ENSCGRG00000017993	Upf2	100	97.797	ENSCLAG00000011434	UPF2	100	97.797	Chinchilla_lanigera
ENSCGRG00000017993	Upf2	100	97.563	ENSCSAG00000013372	UPF2	100	97.563	Chlorocebus_sabaeus
ENSCGRG00000017993	Upf2	87	99.330	ENSCHOG00000000422	UPF2	89	99.330	Choloepus_hoffmanni
ENSCGRG00000017993	Upf2	99	92.277	ENSCPBG00000027823	UPF2	100	92.987	Chrysemys_picta_bellii
ENSCGRG00000017993	Upf2	79	49.312	ENSCSAVG00000007772	-	99	48.317	Ciona_savignyi
ENSCGRG00000017993	Upf2	99	91.478	ENSCANG00000040396	UPF2	100	91.243	Colobus_angolensis_palliatus
ENSCGRG00000017993	Upf2	100	100.000	ENSCGRG00001019347	Upf2	100	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000017993	Upf2	91	80.743	ENSCSEG00000003520	UPF2	91	80.189	Cynoglossus_semilaevis
ENSCGRG00000017993	Upf2	99	82.233	ENSCVAG00000006167	UPF2	100	81.840	Cyprinodon_variegatus
ENSCGRG00000017993	Upf2	100	97.954	ENSDNOG00000018160	UPF2	100	97.954	Dasypus_novemcinctus
ENSCGRG00000017993	Upf2	100	98.110	ENSDORG00000002478	Upf2	100	98.110	Dipodomys_ordii
ENSCGRG00000017993	Upf2	72	100.000	ENSETEG00000011583	-	66	100.000	Echinops_telfairi
ENSCGRG00000017993	Upf2	69	68.460	ENSEBUG00000012448	-	87	72.483	Eptatretus_burgeri
ENSCGRG00000017993	Upf2	100	97.876	ENSEASG00005019274	UPF2	100	98.148	Equus_asinus_asinus
ENSCGRG00000017993	Upf2	100	97.954	ENSECAG00000017022	UPF2	100	97.954	Equus_caballus
ENSCGRG00000017993	Upf2	82	92.652	ENSEEUG00000007819	UPF2	82	92.332	Erinaceus_europaeus
ENSCGRG00000017993	Upf2	99	80.986	ENSELUG00000012014	UPF2	100	81.790	Esox_lucius
ENSCGRG00000017993	Upf2	100	98.895	ENSFCAG00000005785	UPF2	100	97.954	Felis_catus
ENSCGRG00000017993	Upf2	100	92.998	ENSFALG00000001889	UPF2	98	93.470	Ficedula_albicollis
ENSCGRG00000017993	Upf2	100	97.638	ENSFDAG00000014348	UPF2	100	97.638	Fukomys_damarensis
ENSCGRG00000017993	Upf2	99	82.805	ENSFHEG00000009826	UPF2	99	82.488	Fundulus_heteroclitus
ENSCGRG00000017993	Upf2	91	83.910	ENSGMOG00000005557	UPF2	91	83.520	Gadus_morhua
ENSCGRG00000017993	Upf2	100	93.553	ENSGALG00000033772	UPF2	100	94.025	Gallus_gallus
ENSCGRG00000017993	Upf2	100	79.391	ENSGAFG00000020867	UPF2	100	81.187	Gambusia_affinis
ENSCGRG00000017993	Upf2	90	84.111	ENSGACG00000001080	UPF2	100	82.252	Gasterosteus_aculeatus
ENSCGRG00000017993	Upf2	100	93.784	ENSGAGG00000002700	UPF2	100	93.627	Gopherus_agassizii
ENSCGRG00000017993	Upf2	100	97.327	ENSGGOG00000001479	UPF2	100	97.327	Gorilla_gorilla
ENSCGRG00000017993	Upf2	100	80.406	ENSHBUG00000004249	UPF2	100	82.408	Haplochromis_burtoni
ENSCGRG00000017993	Upf2	99	86.142	ENSHGLG00000003822	-	99	84.397	Heterocephalus_glaber_female
ENSCGRG00000017993	Upf2	100	97.561	ENSHGLG00000015176	-	100	97.561	Heterocephalus_glaber_female
ENSCGRG00000017993	Upf2	99	94.322	ENSHGLG00100010036	UPF2	89	97.482	Heterocephalus_glaber_male
ENSCGRG00000017993	Upf2	100	80.590	ENSHCOG00000004025	UPF2	99	80.342	Hippocampus_comes
ENSCGRG00000017993	Upf2	100	82.436	ENSIPUG00000015524	UPF2	100	82.734	Ictalurus_punctatus
ENSCGRG00000017993	Upf2	100	98.268	ENSSTOG00000013075	UPF2	100	98.268	Ictidomys_tridecemlineatus
ENSCGRG00000017993	Upf2	100	97.323	ENSJJAG00000004913	Upf2	100	97.323	Jaculus_jaculus
ENSCGRG00000017993	Upf2	99	82.609	ENSKMAG00000001071	UPF2	99	82.567	Kryptolebias_marmoratus
ENSCGRG00000017993	Upf2	100	83.048	ENSLBEG00000016394	-	99	82.866	Labrus_bergylta
ENSCGRG00000017993	Upf2	80	82.793	ENSLBEG00000000728	-	93	82.793	Labrus_bergylta
ENSCGRG00000017993	Upf2	99	80.000	ENSLACG00000015945	UPF2	100	79.922	Latimeria_chalumnae
ENSCGRG00000017993	Upf2	99	85.816	ENSLOCG00000015698	UPF2	100	86.131	Lepisosteus_oculatus
ENSCGRG00000017993	Upf2	100	97.484	ENSMFAG00000043865	UPF2	100	97.484	Macaca_fascicularis
ENSCGRG00000017993	Upf2	100	97.484	ENSMMUG00000008241	UPF2	100	97.484	Macaca_mulatta
ENSCGRG00000017993	Upf2	81	96.878	ENSMNEG00000008062	UPF2	100	96.878	Macaca_nemestrina
ENSCGRG00000017993	Upf2	95	99.034	ENSMLEG00000036120	UPF2	100	99.034	Mandrillus_leucophaeus
ENSCGRG00000017993	Upf2	100	82.115	ENSMAMG00000018276	UPF2	100	82.243	Mastacembelus_armatus
ENSCGRG00000017993	Upf2	100	80.562	ENSMZEG00005021595	UPF2	100	82.436	Maylandia_zebra
ENSCGRG00000017993	Upf2	99	92.913	ENSMGAG00000004573	UPF2	99	93.386	Meleagris_gallopavo
ENSCGRG00000017993	Upf2	100	97.557	ENSMAUG00000016512	Upf2	100	97.557	Mesocricetus_auratus
ENSCGRG00000017993	Upf2	95	98.469	ENSMICG00000001716	UPF2	99	98.469	Microcebus_murinus
ENSCGRG00000017993	Upf2	100	98.897	ENSMOCG00000008263	Upf2	100	98.897	Microtus_ochrogaster
ENSCGRG00000017993	Upf2	99	80.438	ENSMMOG00000006528	UPF2	100	78.762	Mola_mola
ENSCGRG00000017993	Upf2	100	95.122	ENSMODG00000016794	UPF2	100	95.594	Monodelphis_domestica
ENSCGRG00000017993	Upf2	99	82.017	ENSMALG00000002663	UPF2	100	82.302	Monopterus_albus
ENSCGRG00000017993	Upf2	100	98.739	MGP_CAROLIEiJ_G0023157	Upf2	100	99.427	Mus_caroli
ENSCGRG00000017993	Upf2	100	98.739	ENSMUSG00000043241	Upf2	100	98.739	Mus_musculus
ENSCGRG00000017993	Upf2	100	98.582	MGP_PahariEiJ_G0019217	Upf2	100	98.582	Mus_pahari
ENSCGRG00000017993	Upf2	100	98.976	MGP_SPRETEiJ_G0024075	Upf2	100	98.976	Mus_spretus
ENSCGRG00000017993	Upf2	100	98.269	ENSMPUG00000001064	UPF2	100	98.269	Mustela_putorius_furo
ENSCGRG00000017993	Upf2	99	97.329	ENSMLUG00000000228	UPF2	100	97.329	Myotis_lucifugus
ENSCGRG00000017993	Upf2	100	80.562	ENSNBRG00000013629	UPF2	100	82.436	Neolamprologus_brichardi
ENSCGRG00000017993	Upf2	100	97.484	ENSNLEG00000012058	UPF2	100	97.484	Nomascus_leucogenys
ENSCGRG00000017993	Upf2	56	97.409	ENSMEUG00000002180	-	54	97.409	Notamacropus_eugenii
ENSCGRG00000017993	Upf2	82	99.296	ENSOPRG00000006801	-	82	99.296	Ochotona_princeps
ENSCGRG00000017993	Upf2	100	97.404	ENSODEG00000001290	UPF2	100	97.404	Octodon_degus
ENSCGRG00000017993	Upf2	100	80.562	ENSONIG00000017991	UPF2	100	82.436	Oreochromis_niloticus
ENSCGRG00000017993	Upf2	99	97.100	ENSOCUG00000006230	UPF2	100	97.100	Oryctolagus_cuniculus
ENSCGRG00000017993	Upf2	100	80.934	ENSORLG00000017189	UPF2	100	81.669	Oryzias_latipes
ENSCGRG00000017993	Upf2	100	80.934	ENSORLG00020005969	UPF2	100	81.669	Oryzias_latipes_hni
ENSCGRG00000017993	Upf2	100	80.934	ENSORLG00015005713	UPF2	100	81.669	Oryzias_latipes_hsok
ENSCGRG00000017993	Upf2	99	77.457	ENSOMEG00000023420	UPF2	98	78.890	Oryzias_melastigma
ENSCGRG00000017993	Upf2	100	97.954	ENSOGAG00000005796	UPF2	100	97.954	Otolemur_garnettii
ENSCGRG00000017993	Upf2	100	97.800	ENSOARG00000014587	UPF2	100	97.800	Ovis_aries
ENSCGRG00000017993	Upf2	99	93.584	ENSPPAG00000037953	UPF2	100	94.326	Pan_paniscus
ENSCGRG00000017993	Upf2	100	97.954	ENSPPRG00000000690	UPF2	100	97.954	Panthera_pardus
ENSCGRG00000017993	Upf2	100	97.954	ENSPTIG00000008867	UPF2	100	97.954	Panthera_tigris_altaica
ENSCGRG00000017993	Upf2	100	97.327	ENSPTRG00000002291	UPF2	100	97.327	Pan_troglodytes
ENSCGRG00000017993	Upf2	100	97.484	ENSPANG00000023399	UPF2	100	97.484	Papio_anubis
ENSCGRG00000017993	Upf2	100	81.187	ENSPKIG00000025502	UPF2	100	80.874	Paramormyrops_kingsleyae
ENSCGRG00000017993	Upf2	59	92.563	ENSPSIG00000015158	UPF2	95	92.563	Pelodiscus_sinensis
ENSCGRG00000017993	Upf2	99	79.969	ENSPMGG00000005259	UPF2	100	80.503	Periophthalmus_magnuspinnatus
ENSCGRG00000017993	Upf2	93	99.417	ENSPEMG00000015731	Upf2	99	99.417	Peromyscus_maniculatus_bairdii
ENSCGRG00000017993	Upf2	100	95.594	ENSPCIG00000006656	UPF2	100	95.594	Phascolarctos_cinereus
ENSCGRG00000017993	Upf2	100	79.469	ENSPFOG00000017118	UPF2	100	81.655	Poecilia_formosa
ENSCGRG00000017993	Upf2	100	79.469	ENSPLAG00000005094	UPF2	100	81.655	Poecilia_latipinna
ENSCGRG00000017993	Upf2	100	79.469	ENSPMEG00000017009	UPF2	100	81.655	Poecilia_mexicana
ENSCGRG00000017993	Upf2	99	79.310	ENSPREG00000021880	UPF2	100	81.925	Poecilia_reticulata
ENSCGRG00000017993	Upf2	66	98.565	ENSPPYG00000002089	-	100	98.565	Pongo_abelii
ENSCGRG00000017993	Upf2	100	83.556	ENSPCAG00000000684	UPF2	90	87.420	Procavia_capensis
ENSCGRG00000017993	Upf2	99	94.874	ENSPCOG00000021656	UPF2	100	94.953	Propithecus_coquereli
ENSCGRG00000017993	Upf2	100	90.016	ENSPVAG00000017286	UPF2	100	89.858	Pteropus_vampyrus
ENSCGRG00000017993	Upf2	99	78.108	ENSPNYG00000017096	UPF2	100	79.984	Pundamilia_nyererei
ENSCGRG00000017993	Upf2	100	83.919	ENSPNAG00000009357	UPF2	100	84.153	Pygocentrus_nattereri
ENSCGRG00000017993	Upf2	99	93.082	ENSRNOG00000023593	Upf2	100	100.000	Rattus_norvegicus
ENSCGRG00000017993	Upf2	99	96.688	ENSRBIG00000037780	UPF2	100	96.688	Rhinopithecus_bieti
ENSCGRG00000017993	Upf2	100	97.561	ENSRROG00000043547	UPF2	100	97.561	Rhinopithecus_roxellana
ENSCGRG00000017993	Upf2	100	97.325	ENSSBOG00000020012	UPF2	100	97.325	Saimiri_boliviensis_boliviensis
ENSCGRG00000017993	Upf2	100	81.060	ENSSFOG00015023788	upf2	100	82.619	Scleropages_formosus
ENSCGRG00000017993	Upf2	90	82.812	ENSSMAG00000007637	UPF2	100	78.915	Scophthalmus_maximus
ENSCGRG00000017993	Upf2	100	82.748	ENSSDUG00000017244	UPF2	99	82.683	Seriola_dumerili
ENSCGRG00000017993	Upf2	99	81.098	ENSSLDG00000016866	UPF2	82	84.169	Seriola_lalandi_dorsalis
ENSCGRG00000017993	Upf2	100	95.594	ENSSARG00000008615	UPF2	100	95.279	Sorex_araneus
ENSCGRG00000017993	Upf2	99	90.551	ENSSPUG00000014544	UPF2	99	90.157	Sphenodon_punctatus
ENSCGRG00000017993	Upf2	68	98.389	ENSSSCG00000011117	-	100	98.389	Sus_scrofa
ENSCGRG00000017993	Upf2	99	93.533	ENSTGUG00000002163	-	100	93.454	Taeniopygia_guttata
ENSCGRG00000017993	Upf2	100	82.009	ENSTRUG00000007519	UPF2	99	82.059	Takifugu_rubripes
ENSCGRG00000017993	Upf2	100	79.782	ENSTNIG00000004453	UPF2	94	83.959	Tetraodon_nigroviridis
ENSCGRG00000017993	Upf2	93	90.925	ENSTBEG00000012679	UPF2	93	90.925	Tupaia_belangeri
ENSCGRG00000017993	Upf2	100	97.718	ENSTTRG00000016388	UPF2	100	97.718	Tursiops_truncatus
ENSCGRG00000017993	Upf2	95	99.306	ENSUAMG00000023560	UPF2	100	98.013	Ursus_americanus
ENSCGRG00000017993	Upf2	100	98.112	ENSUMAG00000012953	UPF2	95	98.112	Ursus_maritimus
ENSCGRG00000017993	Upf2	85	96.774	ENSVPAG00000006763	UPF2	85	96.774	Vicugna_pacos
ENSCGRG00000017993	Upf2	100	98.190	ENSVVUG00000006166	UPF2	100	98.190	Vulpes_vulpes
ENSCGRG00000017993	Upf2	100	83.398	ENSXETG00000033103	UPF2	91	89.100	Xenopus_tropicalis
ENSCGRG00000017993	Upf2	91	84.003	ENSXCOG00000011604	UPF2	100	81.314	Xiphophorus_couchianus
ENSCGRG00000017993	Upf2	92	84.202	ENSXMAG00000017209	UPF2	100	81.343	Xiphophorus_maculatus