EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00000017995 (Gene tree)
Gene ID: -
Gene Symbol: Rpusd1
Alias: 2310051D06Rik
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Minus strand
Length: 5734 bases
Position: chrJH000273.1:559701-565434
Accession: 100773796
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000024843	PseudoU_synth_2	PF00849.22	9.9e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000025179	-	3336	XM_003501566	ENSCGRP00000024843	303 (aa)	XP_003501614	G3HBV3

Gene Model

Click here to download ENSCGRG00000017995's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000017995's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000017995	Rpusd1	100	79.167	ENSG00000007376	RPUSD1	100	86.310	Homo_sapiens
ENSCGRG00000017995	Rpusd1	98	56.106	ENSAPOG00000022221	rpusd1	98	56.106	Acanthochromis_polyacanthus
ENSCGRG00000017995	Rpusd1	100	82.566	ENSAMEG00000007461	RPUSD1	100	82.566	Ailuropoda_melanoleuca
ENSCGRG00000017995	Rpusd1	98	57.329	ENSACIG00000015863	rpusd1	98	57.003	Amphilophus_citrinellus
ENSCGRG00000017995	Rpusd1	98	55.229	ENSAOCG00000021975	rpusd1	95	55.882	Amphiprion_ocellaris
ENSCGRG00000017995	Rpusd1	98	55.556	ENSAPEG00000001316	rpusd1	95	56.209	Amphiprion_percula
ENSCGRG00000017995	Rpusd1	83	63.241	ENSATEG00000002984	rpusd1	98	56.209	Anabas_testudineus
ENSCGRG00000017995	Rpusd1	78	60.905	ENSAPLG00000012316	RPUSD1	99	60.905	Anas_platyrhynchos
ENSCGRG00000017995	Rpusd1	99	69.205	ENSACAG00000008953	RPUSD1	100	69.205	Anolis_carolinensis
ENSCGRG00000017995	Rpusd1	100	81.090	ENSANAG00000024709	RPUSD1	100	82.051	Aotus_nancymaae
ENSCGRG00000017995	Rpusd1	98	56.410	ENSACLG00000013692	rpusd1	98	57.143	Astatotilapia_calliptera
ENSCGRG00000017995	Rpusd1	99	59.333	ENSAMXG00000019802	rpusd1	100	59.333	Astyanax_mexicanus
ENSCGRG00000017995	Rpusd1	100	82.468	ENSBTAG00000000179	RPUSD1	100	84.416	Bos_taurus
ENSCGRG00000017995	Rpusd1	100	80.128	ENSCJAG00000012253	RPUSD1	100	81.410	Callithrix_jacchus
ENSCGRG00000017995	Rpusd1	100	82.178	ENSCAFG00000019614	RPUSD1	100	82.895	Canis_familiaris
ENSCGRG00000017995	Rpusd1	100	82.178	ENSCAFG00020008891	RPUSD1	100	82.895	Canis_lupus_dingo
ENSCGRG00000017995	Rpusd1	100	82.468	ENSCHIG00000012872	RPUSD1	100	84.416	Capra_hircus
ENSCGRG00000017995	Rpusd1	100	83.498	ENSTSYG00000036934	RPUSD1	100	83.498	Carlito_syrichta
ENSCGRG00000017995	Rpusd1	100	86.275	ENSCAPG00000014219	RPUSD1	100	86.275	Cavia_aperea
ENSCGRG00000017995	Rpusd1	100	86.275	ENSCPOG00000034604	RPUSD1	100	86.275	Cavia_porcellus
ENSCGRG00000017995	Rpusd1	100	81.731	ENSCCAG00000034385	RPUSD1	100	82.692	Cebus_capucinus
ENSCGRG00000017995	Rpusd1	100	81.410	ENSCATG00000042983	RPUSD1	100	82.372	Cercocebus_atys
ENSCGRG00000017995	Rpusd1	100	84.641	ENSCLAG00000013966	RPUSD1	100	84.967	Chinchilla_lanigera
ENSCGRG00000017995	Rpusd1	100	80.449	ENSCSAG00000012121	RPUSD1	100	81.731	Chlorocebus_sabaeus
ENSCGRG00000017995	Rpusd1	99	66.885	ENSCPBG00000021101	RPUSD1	99	66.885	Chrysemys_picta_bellii
ENSCGRG00000017995	Rpusd1	92	83.274	ENSCANG00000028576	RPUSD1	100	83.274	Colobus_angolensis_palliatus
ENSCGRG00000017995	Rpusd1	100	100.000	ENSCGRG00001014253	Rpusd1	100	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000017995	Rpusd1	99	56.667	ENSCSEG00000018512	rpusd1	100	56.667	Cynoglossus_semilaevis
ENSCGRG00000017995	Rpusd1	98	57.143	ENSCVAG00000022746	rpusd1	98	57.143	Cyprinodon_variegatus
ENSCGRG00000017995	Rpusd1	99	63.000	ENSDARG00000060192	rpusd1	100	63.000	Danio_rerio
ENSCGRG00000017995	Rpusd1	100	77.885	ENSDNOG00000003721	RPUSD1	100	79.167	Dasypus_novemcinctus
ENSCGRG00000017995	Rpusd1	100	87.789	ENSDORG00000026656	Rpusd1	100	87.789	Dipodomys_ordii
ENSCGRG00000017995	Rpusd1	99	46.349	ENSEBUG00000008767	rpusd1	94	46.349	Eptatretus_burgeri
ENSCGRG00000017995	Rpusd1	100	80.063	ENSEASG00005018421	RPUSD1	76	81.646	Equus_asinus_asinus
ENSCGRG00000017995	Rpusd1	84	60.630	ENSELUG00000014307	rpusd1	88	55.195	Esox_lucius
ENSCGRG00000017995	Rpusd1	100	81.250	ENSFCAG00000010359	RPUSD1	100	81.250	Felis_catus
ENSCGRG00000017995	Rpusd1	99	68.301	ENSFALG00000003211	RPUSD1	100	68.301	Ficedula_albicollis
ENSCGRG00000017995	Rpusd1	100	85.621	ENSFDAG00000013398	RPUSD1	100	85.621	Fukomys_damarensis
ENSCGRG00000017995	Rpusd1	98	56.908	ENSFHEG00000004736	rpusd1	98	56.908	Fundulus_heteroclitus
ENSCGRG00000017995	Rpusd1	83	62.451	ENSGMOG00000010756	rpusd1	99	54.723	Gadus_morhua
ENSCGRG00000017995	Rpusd1	99	66.990	ENSGALG00000005315	RPUSD1	100	66.990	Gallus_gallus
ENSCGRG00000017995	Rpusd1	98	58.472	ENSGAFG00000009886	rpusd1	98	58.472	Gambusia_affinis
ENSCGRG00000017995	Rpusd1	83	63.745	ENSGACG00000014276	rpusd1	98	56.908	Gasterosteus_aculeatus
ENSCGRG00000017995	Rpusd1	99	66.776	ENSGAGG00000004181	RPUSD1	99	66.776	Gopherus_agassizii
ENSCGRG00000017995	Rpusd1	100	79.487	ENSGGOG00000013997	RPUSD1	100	80.449	Gorilla_gorilla
ENSCGRG00000017995	Rpusd1	98	56.090	ENSHBUG00000023728	rpusd1	98	56.818	Haplochromis_burtoni
ENSCGRG00000017995	Rpusd1	100	85.294	ENSHGLG00000002595	RPUSD1	100	85.294	Heterocephalus_glaber_female
ENSCGRG00000017995	Rpusd1	100	85.294	ENSHGLG00100014303	RPUSD1	100	85.294	Heterocephalus_glaber_male
ENSCGRG00000017995	Rpusd1	98	57.718	ENSHCOG00000002390	rpusd1	99	57.718	Hippocampus_comes
ENSCGRG00000017995	Rpusd1	99	61.056	ENSIPUG00000001570	rpusd1	99	61.056	Ictalurus_punctatus
ENSCGRG00000017995	Rpusd1	100	87.255	ENSSTOG00000004276	RPUSD1	100	87.255	Ictidomys_tridecemlineatus
ENSCGRG00000017995	Rpusd1	100	89.869	ENSJJAG00000015696	Rpusd1	100	89.869	Jaculus_jaculus
ENSCGRG00000017995	Rpusd1	98	56.478	ENSKMAG00000017287	rpusd1	98	56.478	Kryptolebias_marmoratus
ENSCGRG00000017995	Rpusd1	98	56.536	ENSLBEG00000022502	rpusd1	98	56.536	Labrus_bergylta
ENSCGRG00000017995	Rpusd1	98	56.536	ENSLBEG00000013354	RPUSD1	98	56.536	Labrus_bergylta
ENSCGRG00000017995	Rpusd1	99	63.607	ENSLACG00000008869	RPUSD1	99	63.607	Latimeria_chalumnae
ENSCGRG00000017995	Rpusd1	71	73.611	ENSLOCG00000005682	rpusd1	99	73.611	Lepisosteus_oculatus
ENSCGRG00000017995	Rpusd1	100	80.198	ENSLAFG00000002115	RPUSD1	100	80.198	Loxodonta_africana
ENSCGRG00000017995	Rpusd1	100	80.449	ENSMFAG00000003961	RPUSD1	100	82.372	Macaca_fascicularis
ENSCGRG00000017995	Rpusd1	100	80.449	ENSMMUG00000000842	RPUSD1	100	82.372	Macaca_mulatta
ENSCGRG00000017995	Rpusd1	100	80.449	ENSMNEG00000042712	RPUSD1	100	82.372	Macaca_nemestrina
ENSCGRG00000017995	Rpusd1	100	80.449	ENSMLEG00000030591	RPUSD1	100	82.372	Mandrillus_leucophaeus
ENSCGRG00000017995	Rpusd1	83	63.241	ENSMAMG00000004735	rpusd1	98	56.678	Mastacembelus_armatus
ENSCGRG00000017995	Rpusd1	98	56.410	ENSMZEG00005003214	rpusd1	98	57.143	Maylandia_zebra
ENSCGRG00000017995	Rpusd1	97	66.447	ENSMGAG00000005447	RPUSD1	99	66.447	Meleagris_gallopavo
ENSCGRG00000017995	Rpusd1	86	87.023	ENSMAUG00000019998	Rpusd1	100	87.023	Mesocricetus_auratus
ENSCGRG00000017995	Rpusd1	100	85.761	ENSMICG00000017561	RPUSD1	100	86.408	Microcebus_murinus
ENSCGRG00000017995	Rpusd1	100	92.810	ENSMOCG00000014082	Rpusd1	100	92.810	Microtus_ochrogaster
ENSCGRG00000017995	Rpusd1	81	64.082	ENSMMOG00000012569	rpusd1	99	57.000	Mola_mola
ENSCGRG00000017995	Rpusd1	100	70.288	ENSMODG00000016882	RPUSD1	100	70.288	Monodelphis_domestica
ENSCGRG00000017995	Rpusd1	98	56.678	ENSMALG00000017818	rpusd1	98	57.003	Monopterus_albus
ENSCGRG00000017995	Rpusd1	100	92.484	MGP_CAROLIEiJ_G0021244	Rpusd1	100	92.484	Mus_caroli
ENSCGRG00000017995	Rpusd1	100	92.810	ENSMUSG00000041199	Rpusd1	100	92.810	Mus_musculus
ENSCGRG00000017995	Rpusd1	100	90.909	MGP_PahariEiJ_G0023562	Rpusd1	100	90.909	Mus_pahari
ENSCGRG00000017995	Rpusd1	100	92.810	MGP_SPRETEiJ_G0022155	Rpusd1	100	92.810	Mus_spretus
ENSCGRG00000017995	Rpusd1	100	82.178	ENSMPUG00000015897	RPUSD1	100	82.838	Mustela_putorius_furo
ENSCGRG00000017995	Rpusd1	100	83.280	ENSMLUG00000001089	RPUSD1	100	84.244	Myotis_lucifugus
ENSCGRG00000017995	Rpusd1	100	90.850	ENSNGAG00000003595	Rpusd1	100	90.850	Nannospalax_galili
ENSCGRG00000017995	Rpusd1	98	58.586	ENSNBRG00000006457	rpusd1	98	58.586	Neolamprologus_brichardi
ENSCGRG00000017995	Rpusd1	55	74.286	ENSNLEG00000008424	-	100	75.429	Nomascus_leucogenys
ENSCGRG00000017995	Rpusd1	100	70.455	ENSMEUG00000016049	RPUSD1	100	70.455	Notamacropus_eugenii
ENSCGRG00000017995	Rpusd1	99	77.409	ENSOPRG00000008340	RPUSD1	99	77.409	Ochotona_princeps
ENSCGRG00000017995	Rpusd1	100	83.987	ENSODEG00000016945	RPUSD1	100	83.987	Octodon_degus
ENSCGRG00000017995	Rpusd1	98	55.627	ENSONIG00000015672	rpusd1	99	56.352	Oreochromis_niloticus
ENSCGRG00000017995	Rpusd1	99	57.947	ENSORLG00000013009	rpusd1	99	57.947	Oryzias_latipes
ENSCGRG00000017995	Rpusd1	99	57.616	ENSORLG00020010382	rpusd1	99	57.616	Oryzias_latipes_hni
ENSCGRG00000017995	Rpusd1	99	56.954	ENSORLG00015021354	rpusd1	99	56.954	Oryzias_latipes_hsok
ENSCGRG00000017995	Rpusd1	98	58.528	ENSOMEG00000021426	rpusd1	98	58.863	Oryzias_melastigma
ENSCGRG00000017995	Rpusd1	100	84.295	ENSOGAG00000003795	RPUSD1	100	85.256	Otolemur_garnettii
ENSCGRG00000017995	Rpusd1	100	82.468	ENSOARG00000014254	RPUSD1	100	84.091	Ovis_aries
ENSCGRG00000017995	Rpusd1	100	78.846	ENSPPAG00000034797	RPUSD1	100	79.808	Pan_paniscus
ENSCGRG00000017995	Rpusd1	100	80.528	ENSPPRG00000012389	RPUSD1	100	80.528	Panthera_pardus
ENSCGRG00000017995	Rpusd1	100	80.592	ENSPTIG00000008545	RPUSD1	92	80.592	Panthera_tigris_altaica
ENSCGRG00000017995	Rpusd1	100	78.846	ENSPTRG00000007565	RPUSD1	100	79.808	Pan_troglodytes
ENSCGRG00000017995	Rpusd1	100	79.808	ENSPANG00000024401	RPUSD1	100	81.731	Papio_anubis
ENSCGRG00000017995	Rpusd1	99	60.458	ENSPKIG00000018890	rpusd1	91	60.458	Paramormyrops_kingsleyae
ENSCGRG00000017995	Rpusd1	99	67.869	ENSPSIG00000013945	RPUSD1	100	67.869	Pelodiscus_sinensis
ENSCGRG00000017995	Rpusd1	99	57.525	ENSPMGG00000014950	rpusd1	99	57.525	Periophthalmus_magnuspinnatus
ENSCGRG00000017995	Rpusd1	100	92.810	ENSPEMG00000000497	Rpusd1	100	93.464	Peromyscus_maniculatus_bairdii
ENSCGRG00000017995	Rpusd1	83	56.746	ENSPMAG00000001563	rpusd1	99	50.658	Petromyzon_marinus
ENSCGRG00000017995	Rpusd1	100	70.645	ENSPCIG00000021216	-	94	70.645	Phascolarctos_cinereus
ENSCGRG00000017995	Rpusd1	98	58.882	ENSPFOG00000007946	rpusd1	98	58.882	Poecilia_formosa
ENSCGRG00000017995	Rpusd1	98	58.882	ENSPLAG00000011925	rpusd1	98	58.882	Poecilia_latipinna
ENSCGRG00000017995	Rpusd1	98	58.553	ENSPMEG00000002910	rpusd1	98	58.553	Poecilia_mexicana
ENSCGRG00000017995	Rpusd1	98	59.136	ENSPREG00000019851	rpusd1	98	59.136	Poecilia_reticulata
ENSCGRG00000017995	Rpusd1	100	66.007	ENSPCAG00000002258	RPUSD1	100	66.007	Procavia_capensis
ENSCGRG00000017995	Rpusd1	100	85.256	ENSPCOG00000022582	RPUSD1	100	85.897	Propithecus_coquereli
ENSCGRG00000017995	Rpusd1	100	79.808	ENSPVAG00000013104	RPUSD1	100	81.410	Pteropus_vampyrus
ENSCGRG00000017995	Rpusd1	98	58.249	ENSPNYG00000024076	rpusd1	98	58.249	Pundamilia_nyererei
ENSCGRG00000017995	Rpusd1	99	58.333	ENSPNAG00000013806	rpusd1	100	58.333	Pygocentrus_nattereri
ENSCGRG00000017995	Rpusd1	100	91.830	ENSRNOG00000023639	Rpusd1	100	91.830	Rattus_norvegicus
ENSCGRG00000017995	Rpusd1	100	80.449	ENSRBIG00000030238	RPUSD1	100	81.410	Rhinopithecus_bieti
ENSCGRG00000017995	Rpusd1	100	80.449	ENSRROG00000036663	RPUSD1	100	81.410	Rhinopithecus_roxellana
ENSCGRG00000017995	Rpusd1	100	82.178	ENSSBOG00000033063	RPUSD1	100	82.838	Saimiri_boliviensis_boliviensis
ENSCGRG00000017995	Rpusd1	100	70.323	ENSSHAG00000013500	RPUSD1	100	70.323	Sarcophilus_harrisii
ENSCGRG00000017995	Rpusd1	99	62.791	ENSSFOG00015014394	rpusd1	99	62.791	Scleropages_formosus
ENSCGRG00000017995	Rpusd1	98	57.190	ENSSMAG00000008045	rpusd1	91	57.190	Scophthalmus_maximus
ENSCGRG00000017995	Rpusd1	83	65.613	ENSSDUG00000001829	rpusd1	95	58.497	Seriola_dumerili
ENSCGRG00000017995	Rpusd1	83	65.613	ENSSLDG00000020853	rpusd1	95	58.497	Seriola_lalandi_dorsalis
ENSCGRG00000017995	Rpusd1	55	88.024	ENSSARG00000011187	-	100	88.024	Sorex_araneus
ENSCGRG00000017995	Rpusd1	62	54.404	ENSSPUG00000005119	-	100	54.404	Sphenodon_punctatus
ENSCGRG00000017995	Rpusd1	98	58.170	ENSSPAG00000012708	rpusd1	98	58.170	Stegastes_partitus
ENSCGRG00000017995	Rpusd1	100	81.731	ENSSSCG00000008000	RPUSD1	98	87.008	Sus_scrofa
ENSCGRG00000017995	Rpusd1	84	76.078	ENSTGUG00000015375	RPUSD1	100	76.078	Taeniopygia_guttata
ENSCGRG00000017995	Rpusd1	98	55.229	ENSTRUG00000003041	rpusd1	98	55.229	Takifugu_rubripes
ENSCGRG00000017995	Rpusd1	98	54.209	ENSTNIG00000002660	rpusd1	99	54.209	Tetraodon_nigroviridis
ENSCGRG00000017995	Rpusd1	100	80.769	ENSTTRG00000010167	RPUSD1	100	83.333	Tursiops_truncatus
ENSCGRG00000017995	Rpusd1	100	81.848	ENSUAMG00000012736	RPUSD1	100	82.566	Ursus_americanus
ENSCGRG00000017995	Rpusd1	100	81.848	ENSUMAG00000021174	RPUSD1	100	82.566	Ursus_maritimus
ENSCGRG00000017995	Rpusd1	100	81.188	ENSVVUG00000012357	RPUSD1	100	81.188	Vulpes_vulpes
ENSCGRG00000017995	Rpusd1	100	62.829	ENSXETG00000007184	rpusd1	100	62.829	Xenopus_tropicalis
ENSCGRG00000017995	Rpusd1	98	58.140	ENSXCOG00000017930	rpusd1	98	58.140	Xiphophorus_couchianus
ENSCGRG00000017995	Rpusd1	98	58.472	ENSXMAG00000024084	rpusd1	98	58.472	Xiphophorus_maculatus