EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000018332 (Gene tree)
Gene ID: -
Gene Symbol: Zfp53
Alias: -
Full Name: zinc finger protein 53
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Minus strand
Length: 9482 bases
Position: chrJH002006.1:214007-223488
Accession: 99200
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000025322	zf-C2H2	PF00096.26	4.8e-77	1	15
ENSCGRP00000025322	zf-C2H2	PF00096.26	4.8e-77	2	15
ENSCGRP00000025322	zf-C2H2	PF00096.26	4.8e-77	3	15
ENSCGRP00000025322	zf-C2H2	PF00096.26	4.8e-77	4	15
ENSCGRP00000025322	zf-C2H2	PF00096.26	4.8e-77	5	15
ENSCGRP00000025322	zf-C2H2	PF00096.26	4.8e-77	6	15
ENSCGRP00000025322	zf-C2H2	PF00096.26	4.8e-77	7	15
ENSCGRP00000025322	zf-C2H2	PF00096.26	4.8e-77	8	15
ENSCGRP00000025322	zf-C2H2	PF00096.26	4.8e-77	9	15
ENSCGRP00000025322	zf-C2H2	PF00096.26	4.8e-77	10	15
ENSCGRP00000025322	zf-C2H2	PF00096.26	4.8e-77	11	15
ENSCGRP00000025322	zf-C2H2	PF00096.26	4.8e-77	12	15
ENSCGRP00000025322	zf-C2H2	PF00096.26	4.8e-77	13	15
ENSCGRP00000025322	zf-C2H2	PF00096.26	4.8e-77	14	15
ENSCGRP00000025322	zf-C2H2	PF00096.26	4.8e-77	15	15
ENSCGRP00000025322	zf-met	PF12874.7	2.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000025660	-	1920	-	ENSCGRP00000025322	640 (aa)	-	-

Gene Model

Click here to download ENSCGRG00000018332's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000018332's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000018332	Zfp53	92	48.363	ENSCGRG00000013919	Zfp709	99	48.363
ENSCGRG00000018332	Zfp53	93	43.956	ENSCGRG00000015037	Zfp354a	99	43.956
ENSCGRG00000018332	Zfp53	92	49.051	ENSCGRG00000004206	-	86	49.051
ENSCGRG00000018332	Zfp53	85	47.619	ENSCGRG00000015327	Zfp112	72	47.024
ENSCGRG00000018332	Zfp53	92	48.617	ENSCGRG00000008411	Gm3854	99	48.617
ENSCGRG00000018332	Zfp53	85	45.244	ENSCGRG00000000280	-	79	45.244
ENSCGRG00000018332	Zfp53	65	39.098	ENSCGRG00000014932	Snai3	69	39.098
ENSCGRG00000018332	Zfp53	93	48.760	ENSCGRG00000000632	-	100	55.502
ENSCGRG00000018332	Zfp53	94	55.172	ENSCGRG00000012088	Zfp560	75	56.863
ENSCGRG00000018332	Zfp53	65	39.326	ENSCGRG00000004814	Patz1	65	32.281
ENSCGRG00000018332	Zfp53	65	37.931	ENSCGRG00000009080	Snai1	67	37.931
ENSCGRG00000018332	Zfp53	68	34.536	ENSCGRG00000014850	-	91	34.536
ENSCGRG00000018332	Zfp53	76	37.500	ENSCGRG00000012119	Snai2	59	37.931
ENSCGRG00000018332	Zfp53	63	46.970	ENSCGRG00000003246	Zeb2	50	32.632
ENSCGRG00000018332	Zfp53	67	35.980	ENSCGRG00000010996	-	73	35.980
ENSCGRG00000018332	Zfp53	76	42.963	ENSCGRG00000013485	-	100	42.963
ENSCGRG00000018332	Zfp53	93	47.845	ENSCGRG00000001582	Zkscan3	59	48.031
ENSCGRG00000018332	Zfp53	68	41.772	ENSCGRG00000008703	Wt1	60	43.038
ENSCGRG00000018332	Zfp53	95	44.706	ENSCGRG00000009095	Zfp202	64	44.706
ENSCGRG00000018332	Zfp53	93	41.697	ENSCGRG00000010436	-	84	44.019
ENSCGRG00000018332	Zfp53	85	48.387	ENSCGRG00000006987	Zfp768	51	48.387
ENSCGRG00000018332	Zfp53	92	46.085	ENSCGRG00000013626	Zfp715	73	47.393
ENSCGRG00000018332	Zfp53	92	46.825	ENSCGRG00000008922	2610008E11Rik	96	46.825
ENSCGRG00000018332	Zfp53	68	45.455	ENSCGRG00000016739	Zfp423	98	38.750
ENSCGRG00000018332	Zfp53	93	54.292	ENSCGRG00000000411	-	99	54.292
ENSCGRG00000018332	Zfp53	87	47.527	ENSCGRG00000015629	-	69	47.527
ENSCGRG00000018332	Zfp53	93	48.750	ENSCGRG00000016788	-	99	48.750
ENSCGRG00000018332	Zfp53	62	41.860	ENSCGRG00000001380	Scrt2	63	41.860
ENSCGRG00000018332	Zfp53	93	47.458	ENSCGRG00000014813	Zfp454	99	47.458
ENSCGRG00000018332	Zfp53	76	41.144	ENSCGRG00000014598	Zfp319	91	41.033
ENSCGRG00000018332	Zfp53	76	33.418	ENSCGRG00000015472	Repin1	83	32.577
ENSCGRG00000018332	Zfp53	92	49.393	ENSCGRG00000009742	-	94	49.393
ENSCGRG00000018332	Zfp53	69	33.430	ENSCGRG00000012333	Zfp574	91	31.481
ENSCGRG00000018332	Zfp53	85	50.667	ENSCGRG00000017528	Zfp94	85	50.667
ENSCGRG00000018332	Zfp53	88	44.388	ENSCGRG00000016421	-	99	46.961
ENSCGRG00000018332	Zfp53	93	44.225	ENSCGRG00000002730	Zfp39	92	44.225
ENSCGRG00000018332	Zfp53	93	53.409	ENSCGRG00000000778	-	99	51.289
ENSCGRG00000018332	Zfp53	85	48.232	ENSCGRG00000008531	-	90	48.232
ENSCGRG00000018332	Zfp53	65	46.000	ENSCGRG00000000462	Sall4	66	36.066
ENSCGRG00000018332	Zfp53	85	49.123	ENSCGRG00000009462	Zfp236	80	49.123
ENSCGRG00000018332	Zfp53	82	55.000	ENSCGRG00000015809	-	62	55.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000018332	Zfp53	75	51.546	ENSCING00000018801	zf(c2h2)-138	97	51.546	Ciona_intestinalis
ENSCGRG00000018332	Zfp53	84	55.556	ENSCING00000003470	-	94	55.556	Ciona_intestinalis
ENSCGRG00000018332	Zfp53	77	46.245	ENSCSAVG00000010156	-	93	46.245	Ciona_savignyi
ENSCGRG00000018332	Zfp53	93	51.289	ENSCGRG00001007163	-	100	50.746	Cricetulus_griseus_chok1gshd
ENSCGRG00000018332	Zfp53	85	64.255	ENSCGRG00001013602	-	96	64.255	Cricetulus_griseus_chok1gshd
ENSCGRG00000018332	Zfp53	87	57.477	ENSCGRG00001002297	-	99	57.477	Cricetulus_griseus_chok1gshd
ENSCGRG00000018332	Zfp53	76	47.525	ENSEBUG00000016878	-	89	47.525	Eptatretus_burgeri
ENSCGRG00000018332	Zfp53	85	47.407	ENSEBUG00000012823	-	82	47.407	Eptatretus_burgeri
ENSCGRG00000018332	Zfp53	86	43.151	ENSEBUG00000008792	-	98	43.151	Eptatretus_burgeri
ENSCGRG00000018332	Zfp53	75	45.532	ENSEBUG00000012454	-	91	45.532	Eptatretus_burgeri
ENSCGRG00000018332	Zfp53	85	50.128	ENSEBUG00000005655	-	89	47.977	Eptatretus_burgeri
ENSCGRG00000018332	Zfp53	81	39.286	ENSEBUG00000001525	-	85	39.286	Eptatretus_burgeri
ENSCGRG00000018332	Zfp53	85	69.844	ENSMAUG00000005974	-	99	65.947	Mesocricetus_auratus
ENSCGRG00000018332	Zfp53	96	49.654	ENSMAUG00000000939	-	95	42.975	Mesocricetus_auratus
ENSCGRG00000018332	Zfp53	94	65.127	ENSMAUG00000004844	-	100	63.774	Mesocricetus_auratus
ENSCGRG00000018332	Zfp53	92	54.261	ENSMOCG00000007851	-	99	46.751	Microtus_ochrogaster
ENSCGRG00000018332	Zfp53	93	87.248	ENSMOCG00000006946	Zfp53	99	84.551	Microtus_ochrogaster
ENSCGRG00000018332	Zfp53	94	62.063	MGP_CAROLIEiJ_G0021132	Zfp948	99	63.455	Mus_caroli
ENSCGRG00000018332	Zfp53	94	61.436	ENSMUSG00000062743	Zfp677	99	61.436	Mus_musculus
ENSCGRG00000018332	Zfp53	69	44.402	ENSPSIG00000009270	-	71	44.402	Pelodiscus_sinensis
ENSCGRG00000018332	Zfp53	94	52.561	ENSPEMG00000007241	-	100	53.786	Peromyscus_maniculatus_bairdii
ENSCGRG00000018332	Zfp53	94	47.300	ENSPEMG00000023883	-	100	47.300	Peromyscus_maniculatus_bairdii
ENSCGRG00000018332	Zfp53	94	61.770	ENSRNOG00000052406	LOC102552527	99	61.770	Rattus_norvegicus