EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00000018401 (Gene tree)
Gene ID: -
Gene Symbol: Smg7
Alias: 9430023P16Rik
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Minus strand
Length: 45768 bases
Position: chrJH000342.1:424584-470351
Accession: 100760981
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000025408	EST1	PF10374.9	3.8e-25	1	1
ENSCGRP00000025407	EST1	PF10374.9	3.9e-25	1	1
ENSCGRP00000025408	EST1_DNA_bind	PF10373.9	3.7e-55	1	1
ENSCGRP00000025407	EST1_DNA_bind	PF10373.9	3.9e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000025745	-	6619	XM_003502851	ENSCGRP00000025407	1148 (aa)	XP_003502899	-
ENSCGRT00000025746	-	4008	XM_007643480	ENSCGRP00000025408	1124 (aa)	XP_007641670	-

Gene Model

Click here to download ENSCGRG00000018401's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000018401's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000018401	Smg7	100	96.084	ENSG00000116698	SMG7	100	96.429	Homo_sapiens
ENSCGRG00000018401	Smg7	90	72.904	ENSAPOG00000009611	smg7	95	73.525	Acanthochromis_polyacanthus
ENSCGRG00000018401	Smg7	100	94.321	ENSAMEG00000002357	SMG7	99	94.499	Ailuropoda_melanoleuca
ENSCGRG00000018401	Smg7	98	64.114	ENSACIG00000015152	smg7	97	69.500	Amphilophus_citrinellus
ENSCGRG00000018401	Smg7	100	65.494	ENSAOCG00000013538	smg7	99	65.837	Amphiprion_ocellaris
ENSCGRG00000018401	Smg7	100	65.609	ENSAPEG00000007851	smg7	99	65.952	Amphiprion_percula
ENSCGRG00000018401	Smg7	100	64.991	ENSATEG00000006931	smg7	99	65.503	Anabas_testudineus
ENSCGRG00000018401	Smg7	100	87.908	ENSAPLG00000015811	SMG7	99	87.908	Anas_platyrhynchos
ENSCGRG00000018401	Smg7	99	83.585	ENSACAG00000014989	SMG7	99	83.852	Anolis_carolinensis
ENSCGRG00000018401	Smg7	100	94.765	ENSANAG00000028114	SMG7	99	94.765	Aotus_nancymaae
ENSCGRG00000018401	Smg7	100	64.365	ENSACLG00000022079	smg7	99	65.060	Astatotilapia_calliptera
ENSCGRG00000018401	Smg7	100	66.841	ENSAMXG00000020809	smg7	99	66.290	Astyanax_mexicanus
ENSCGRG00000018401	Smg7	100	94.778	ENSBTAG00000008003	SMG7	99	93.878	Bos_taurus
ENSCGRG00000018401	Smg7	100	95.648	ENSCJAG00000005135	SMG7	99	95.648	Callithrix_jacchus
ENSCGRG00000018401	Smg7	100	95.387	ENSCAFG00000013276	SMG7	98	95.561	Canis_familiaris
ENSCGRG00000018401	Smg7	100	95.387	ENSCAFG00020015475	SMG7	99	94.587	Canis_lupus_dingo
ENSCGRG00000018401	Smg7	99	94.704	ENSCHIG00000018192	SMG7	99	94.704	Capra_hircus
ENSCGRG00000018401	Smg7	100	95.213	ENSTSYG00000002667	SMG7	98	95.213	Carlito_syrichta
ENSCGRG00000018401	Smg7	100	95.648	ENSCPOG00000008906	SMG7	99	95.822	Cavia_porcellus
ENSCGRG00000018401	Smg7	100	94.854	ENSCCAG00000028596	SMG7	99	94.854	Cebus_capucinus
ENSCGRG00000018401	Smg7	100	96.258	ENSCATG00000011063	SMG7	98	96.258	Cercocebus_atys
ENSCGRG00000018401	Smg7	100	95.474	ENSCLAG00000010751	SMG7	100	95.474	Chinchilla_lanigera
ENSCGRG00000018401	Smg7	100	96.084	ENSCSAG00000012654	SMG7	98	96.084	Chlorocebus_sabaeus
ENSCGRG00000018401	Smg7	91	87.870	ENSCHOG00000010522	SMG7	93	88.157	Choloepus_hoffmanni
ENSCGRG00000018401	Smg7	100	90.009	ENSCPBG00000015724	SMG7	99	90.009	Chrysemys_picta_bellii
ENSCGRG00000018401	Smg7	100	95.120	ENSCANG00000015680	SMG7	99	95.120	Colobus_angolensis_palliatus
ENSCGRG00000018401	Smg7	100	100.000	ENSCGRG00001013705	Smg7	99	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000018401	Smg7	99	63.887	ENSCVAG00000011842	smg7	99	68.000	Cyprinodon_variegatus
ENSCGRG00000018401	Smg7	100	66.493	ENSDARG00000060767	smg7	99	66.406	Danio_rerio
ENSCGRG00000018401	Smg7	100	95.300	ENSDORG00000007331	Smg7	100	95.300	Dipodomys_ordii
ENSCGRG00000018401	Smg7	95	94.434	ENSETEG00000002654	SMG7	99	94.434	Echinops_telfairi
ENSCGRG00000018401	Smg7	100	96.171	ENSEASG00005006524	SMG7	99	96.117	Equus_asinus_asinus
ENSCGRG00000018401	Smg7	100	96.084	ENSECAG00000004313	SMG7	98	97.695	Equus_caballus
ENSCGRG00000018401	Smg7	94	95.111	ENSEEUG00000002024	SMG7	92	94.926	Erinaceus_europaeus
ENSCGRG00000018401	Smg7	93	71.845	ENSELUG00000010293	smg7	99	64.691	Esox_lucius
ENSCGRG00000018401	Smg7	100	95.561	ENSFCAG00000010900	SMG7	99	95.675	Felis_catus
ENSCGRG00000018401	Smg7	98	82.653	ENSFALG00000003047	SMG7	100	82.568	Ficedula_albicollis
ENSCGRG00000018401	Smg7	98	95.929	ENSFDAG00000012121	SMG7	99	95.897	Fukomys_damarensis
ENSCGRG00000018401	Smg7	100	63.801	ENSFHEG00000011073	smg7	99	63.257	Fundulus_heteroclitus
ENSCGRG00000018401	Smg7	88	66.279	ENSGMOG00000004916	smg7	92	66.279	Gadus_morhua
ENSCGRG00000018401	Smg7	100	87.831	ENSGALG00000004667	SMG7	99	87.743	Gallus_gallus
ENSCGRG00000018401	Smg7	100	63.738	ENSGAFG00000019000	smg7	99	63.566	Gambusia_affinis
ENSCGRG00000018401	Smg7	96	63.891	ENSGACG00000001634	smg7	99	64.211	Gasterosteus_aculeatus
ENSCGRG00000018401	Smg7	100	96.345	ENSGGOG00000002342	SMG7	98	96.345	Gorilla_gorilla
ENSCGRG00000018401	Smg7	100	63.899	ENSHBUG00000003726	smg7	97	71.574	Haplochromis_burtoni
ENSCGRG00000018401	Smg7	100	94.765	ENSHGLG00000009353	SMG7	100	95.722	Heterocephalus_glaber_female
ENSCGRG00000018401	Smg7	100	94.854	ENSHGLG00100009637	-	100	94.029	Heterocephalus_glaber_male
ENSCGRG00000018401	Smg7	99	87.908	ENSHGLG00100004878	-	99	87.908	Heterocephalus_glaber_male
ENSCGRG00000018401	Smg7	100	66.550	ENSIPUG00000016997	smg7	99	66.608	Ictalurus_punctatus
ENSCGRG00000018401	Smg7	100	96.345	ENSSTOG00000000401	SMG7	100	96.345	Ictidomys_tridecemlineatus
ENSCGRG00000018401	Smg7	99	94.965	ENSJJAG00000012351	Smg7	99	94.965	Jaculus_jaculus
ENSCGRG00000018401	Smg7	98	61.491	ENSKMAG00000004900	smg7	97	69.000	Kryptolebias_marmoratus
ENSCGRG00000018401	Smg7	53	61.706	ENSLBEG00000005220	-	75	63.398	Labrus_bergylta
ENSCGRG00000018401	Smg7	100	65.229	ENSLBEG00000002983	smg7	99	65.487	Labrus_bergylta
ENSCGRG00000018401	Smg7	100	74.457	ENSLACG00000000972	SMG7	99	75.239	Latimeria_chalumnae
ENSCGRG00000018401	Smg7	99	67.308	ENSLOCG00000002010	smg7	99	67.475	Lepisosteus_oculatus
ENSCGRG00000018401	Smg7	100	95.735	ENSLAFG00000008186	SMG7	100	95.735	Loxodonta_africana
ENSCGRG00000018401	Smg7	100	96.345	ENSMFAG00000031653	SMG7	99	96.205	Macaca_fascicularis
ENSCGRG00000018401	Smg7	100	96.258	ENSMMUG00000018458	SMG7	98	96.258	Macaca_mulatta
ENSCGRG00000018401	Smg7	100	95.209	ENSMNEG00000034798	SMG7	99	95.209	Macaca_nemestrina
ENSCGRG00000018401	Smg7	100	96.258	ENSMLEG00000037170	SMG7	98	96.258	Mandrillus_leucophaeus
ENSCGRG00000018401	Smg7	88	64.917	ENSMAMG00000018733	smg7	84	64.689	Mastacembelus_armatus
ENSCGRG00000018401	Smg7	100	64.837	ENSMZEG00005015247	smg7	99	65.060	Maylandia_zebra
ENSCGRG00000018401	Smg7	99	87.622	ENSMGAG00000001561	SMG7	99	87.622	Meleagris_gallopavo
ENSCGRG00000018401	Smg7	100	99.216	ENSMAUG00000019484	Smg7	100	99.216	Mesocricetus_auratus
ENSCGRG00000018401	Smg7	100	96.084	ENSMICG00000007145	SMG7	100	96.084	Microcebus_murinus
ENSCGRG00000018401	Smg7	100	98.432	ENSMOCG00000020748	Smg7	100	98.432	Microtus_ochrogaster
ENSCGRG00000018401	Smg7	100	64.038	ENSMMOG00000001524	smg7	99	63.542	Mola_mola
ENSCGRG00000018401	Smg7	92	92.131	ENSMODG00000007139	SMG7	99	92.131	Monodelphis_domestica
ENSCGRG00000018401	Smg7	100	64.772	ENSMALG00000000061	smg7	93	67.164	Monopterus_albus
ENSCGRG00000018401	Smg7	100	98.345	MGP_CAROLIEiJ_G0014704	Smg7	100	98.345	Mus_caroli
ENSCGRG00000018401	Smg7	100	98.171	ENSMUSG00000042772	Smg7	100	98.171	Mus_musculus
ENSCGRG00000018401	Smg7	100	98.258	MGP_PahariEiJ_G0027940	Smg7	100	98.258	Mus_pahari
ENSCGRG00000018401	Smg7	100	98.258	MGP_SPRETEiJ_G0015511	Smg7	100	98.258	Mus_spretus
ENSCGRG00000018401	Smg7	98	95.276	ENSMPUG00000011732	SMG7	97	95.455	Mustela_putorius_furo
ENSCGRG00000018401	Smg7	99	94.881	ENSMLUG00000015417	SMG7	99	94.881	Myotis_lucifugus
ENSCGRG00000018401	Smg7	100	96.951	ENSNGAG00000009836	Smg7	100	96.951	Nannospalax_galili
ENSCGRG00000018401	Smg7	99	60.556	ENSNBRG00000024343	smg7	98	70.297	Neolamprologus_brichardi
ENSCGRG00000018401	Smg7	100	96.258	ENSNLEG00000018018	SMG7	98	96.258	Nomascus_leucogenys
ENSCGRG00000018401	Smg7	77	85.290	ENSMEUG00000004681	SMG7	73	90.650	Notamacropus_eugenii
ENSCGRG00000018401	Smg7	95	83.653	ENSOPRG00000013942	SMG7	96	83.196	Ochotona_princeps
ENSCGRG00000018401	Smg7	100	95.822	ENSODEG00000010390	SMG7	100	95.822	Octodon_degus
ENSCGRG00000018401	Smg7	100	64.146	ENSONIG00000000277	smg7	99	64.751	Oreochromis_niloticus
ENSCGRG00000018401	Smg7	98	90.426	ENSOANG00000000994	SMG7	100	90.514	Ornithorhynchus_anatinus
ENSCGRG00000018401	Smg7	100	88.599	ENSOCUG00000005887	SMG7	94	88.773	Oryctolagus_cuniculus
ENSCGRG00000018401	Smg7	100	63.185	ENSORLG00000007314	smg7	70	92.105	Oryzias_latipes
ENSCGRG00000018401	Smg7	100	63.534	ENSORLG00020015779	smg7	99	63.359	Oryzias_latipes_hni
ENSCGRG00000018401	Smg7	100	63.226	ENSORLG00015012289	smg7	99	63.053	Oryzias_latipes_hsok
ENSCGRG00000018401	Smg7	100	61.925	ENSOMEG00000002328	smg7	99	62.490	Oryzias_melastigma
ENSCGRG00000018401	Smg7	95	95.803	ENSOGAG00000003107	SMG7	93	95.985	Otolemur_garnettii
ENSCGRG00000018401	Smg7	100	94.865	ENSOARG00000001352	SMG7	98	94.865	Ovis_aries
ENSCGRG00000018401	Smg7	100	95.209	ENSPPAG00000031619	SMG7	99	95.209	Pan_paniscus
ENSCGRG00000018401	Smg7	100	95.735	ENSPPRG00000011222	SMG7	99	95.031	Panthera_pardus
ENSCGRG00000018401	Smg7	95	95.529	ENSPTIG00000007242	SMG7	100	91.354	Panthera_tigris_altaica
ENSCGRG00000018401	Smg7	100	95.209	ENSPTRG00000001764	SMG7	99	95.209	Pan_troglodytes
ENSCGRG00000018401	Smg7	100	96.258	ENSPANG00000004520	SMG7	98	96.258	Papio_anubis
ENSCGRG00000018401	Smg7	100	64.618	ENSPKIG00000007242	smg7	99	69.000	Paramormyrops_kingsleyae
ENSCGRG00000018401	Smg7	99	91.029	ENSPSIG00000012201	SMG7	99	90.765	Pelodiscus_sinensis
ENSCGRG00000018401	Smg7	72	42.553	ENSPMGG00000021833	smg7	89	54.000	Periophthalmus_magnuspinnatus
ENSCGRG00000018401	Smg7	100	97.561	ENSPEMG00000011315	Smg7	100	97.561	Peromyscus_maniculatus_bairdii
ENSCGRG00000018401	Smg7	100	91.578	ENSPCIG00000003786	SMG7	99	91.578	Phascolarctos_cinereus
ENSCGRG00000018401	Smg7	99	62.356	ENSPFOG00000019219	smg7	99	62.469	Poecilia_formosa
ENSCGRG00000018401	Smg7	100	63.910	ENSPLAG00000001446	smg7	99	63.738	Poecilia_latipinna
ENSCGRG00000018401	Smg7	97	63.078	ENSPMEG00000005218	smg7	99	62.900	Poecilia_mexicana
ENSCGRG00000018401	Smg7	87	60.534	ENSPREG00000019039	smg7	91	60.474	Poecilia_reticulata
ENSCGRG00000018401	Smg7	100	95.297	ENSPPYG00000000427	SMG7	99	95.297	Pongo_abelii
ENSCGRG00000018401	Smg7	94	84.410	ENSPCAG00000008360	SMG7	94	84.410	Procavia_capensis
ENSCGRG00000018401	Smg7	100	96.084	ENSPCOG00000011996	SMG7	98	96.084	Propithecus_coquereli
ENSCGRG00000018401	Smg7	90	90.000	ENSPVAG00000000851	SMG7	89	90.000	Pteropus_vampyrus
ENSCGRG00000018401	Smg7	100	65.172	ENSPNYG00000007643	smg7	99	65.000	Pundamilia_nyererei
ENSCGRG00000018401	Smg7	100	67.418	ENSPNAG00000011374	smg7	98	68.182	Pygocentrus_nattereri
ENSCGRG00000018401	Smg7	100	97.911	ENSRNOG00000027962	Smg7	100	97.881	Rattus_norvegicus
ENSCGRG00000018401	Smg7	100	96.171	ENSRBIG00000036316	SMG7	98	96.171	Rhinopithecus_bieti
ENSCGRG00000018401	Smg7	100	96.171	ENSRROG00000035719	SMG7	99	96.028	Rhinopithecus_roxellana
ENSCGRG00000018401	Smg7	99	95.587	ENSSBOG00000023454	SMG7	99	95.587	Saimiri_boliviensis_boliviensis
ENSCGRG00000018401	Smg7	100	91.755	ENSSHAG00000013147	SMG7	99	91.674	Sarcophilus_harrisii
ENSCGRG00000018401	Smg7	100	68.591	ENSSFOG00015017252	smg7	99	75.263	Scleropages_formosus
ENSCGRG00000018401	Smg7	100	64.935	ENSSMAG00000006067	smg7	100	63.911	Scophthalmus_maximus
ENSCGRG00000018401	Smg7	94	71.071	ENSSDUG00000017543	smg7	99	65.140	Seriola_dumerili
ENSCGRG00000018401	Smg7	100	88.594	ENSSPUG00000002064	SMG7	99	88.594	Sphenodon_punctatus
ENSCGRG00000018401	Smg7	99	65.933	ENSSPAG00000008733	smg7	98	66.198	Stegastes_partitus
ENSCGRG00000018401	Smg7	100	95.648	ENSSSCG00000015558	SMG7	99	95.587	Sus_scrofa
ENSCGRG00000018401	Smg7	100	87.654	ENSTGUG00000003928	SMG7	99	87.566	Taeniopygia_guttata
ENSCGRG00000018401	Smg7	99	62.752	ENSTNIG00000002802	smg7	99	62.626	Tetraodon_nigroviridis
ENSCGRG00000018401	Smg7	76	93.644	ENSTBEG00000003220	SMG7	75	93.644	Tupaia_belangeri
ENSCGRG00000018401	Smg7	95	95.434	ENSTTRG00000014778	SMG7	94	95.434	Tursiops_truncatus
ENSCGRG00000018401	Smg7	97	91.583	ENSUAMG00000017473	SMG7	100	91.766	Ursus_americanus
ENSCGRG00000018401	Smg7	96	95.450	ENSUMAG00000016389	SMG7	100	95.632	Ursus_maritimus
ENSCGRG00000018401	Smg7	100	95.474	ENSVVUG00000008976	SMG7	99	95.587	Vulpes_vulpes
ENSCGRG00000018401	Smg7	100	69.784	ENSXETG00000012528	smg7	99	70.017	Xenopus_tropicalis
ENSCGRG00000018401	Smg7	100	63.848	ENSXMAG00000007123	smg7	99	63.934	Xiphophorus_maculatus