EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCGRG00000018587 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
splicing factor U2AF 65 kDa subunit
Gene Type
protein_coding
Species
Cricetulus_griseus_crigri
Status
putative
Strand
Plus strand
Length
1410 bases
Position
chrJH000583.1:767381-768790
Accession
100763310
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCGRP00000025605RRM_1PF00076.222e-3213
ENSCGRP00000025605RRM_1PF00076.222e-3223
ENSCGRP00000025605RRM_1PF00076.222e-3233
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCGRT00000025955-1410XM_003505550ENSCGRP00000025605469 (aa)XP_003505598G3HPQ0
Gene Model
Click here to download ENSCGRG00000018587's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000018587's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCGRG00000018587-6935.000ENSCGRG00000000487Elavl28935.000
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCGRG00000018587-9988.085ENSG00000063244U2AF29993.137Homo_sapiens
ENSCGRG00000018587-9970.576ENSAPOG00000002208-10069.723Acanthochromis_polyacanthus
ENSCGRG00000018587-6584.161ENSAPOG00000023155u2af2a9984.161Acanthochromis_polyacanthus
ENSCGRG00000018587-7891.257ENSAMEG00000003864U2AF28991.257Ailuropoda_melanoleuca
ENSCGRG00000018587-8189.474ENSACIG00000005749u2af2a9387.065Amphilophus_citrinellus
ENSCGRG00000018587-9570.395ENSACIG00000014173-8974.334Amphilophus_citrinellus
ENSCGRG00000018587-9980.597ENSAOCG00000015571u2af2a10080.597Amphiprion_ocellaris
ENSCGRG00000018587-9971.002ENSAOCG00000003595-10070.149Amphiprion_ocellaris
ENSCGRG00000018587-9572.036ENSAPEG00000020062-8477.806Amphiprion_percula
ENSCGRG00000018587-8189.211ENSAPEG00000009376u2af2a9288.689Amphiprion_percula
ENSCGRG00000018587-9572.260ENSATEG00000020577-8876.485Anabas_testudineus
ENSCGRG00000018587-9980.384ENSATEG00000022332u2af2a9980.384Anabas_testudineus
ENSCGRG00000018587-9984.958ENSACAG00000015489U2AF29985.201Anolis_carolinensis
ENSCGRG00000018587-9985.794ENSANAG00000028042U2AF29989.091Aotus_nancymaae
ENSCGRG00000018587-9971.002ENSACLG00000020793-10070.149Astatotilapia_calliptera
ENSCGRG00000018587-9980.810ENSACLG00000022181u2af2a9387.065Astatotilapia_calliptera
ENSCGRG00000018587-9978.038ENSAMXG00000039454u2af2b9977.825Astyanax_mexicanus
ENSCGRG00000018587-9976.778ENSAMXG00000033347u2af2a9976.875Astyanax_mexicanus
ENSCGRG00000018587-9987.131ENSBTAG00000002830U2AF29987.553Bos_taurus
ENSCGRG00000018587-8359.231WBGene00006697uaf-110054.054Caenorhabditis_elegans
ENSCGRG00000018587-9987.342ENSCJAG00000017128U2AF29987.764Callithrix_jacchus
ENSCGRG00000018587-9988.085ENSCAFG00000002551U2AF29988.511Canis_familiaris
ENSCGRG00000018587-8391.919ENSCAFG00020015445U2AF28391.919Canis_lupus_dingo
ENSCGRG00000018587-8576.601ENSCHIG00000023595U2AF28975.912Capra_hircus
ENSCGRG00000018587-9987.342ENSTSYG00000007432U2AF29987.764Carlito_syrichta
ENSCGRG00000018587-8791.748ENSCAPG00000008466U2AF29091.748Cavia_aperea
ENSCGRG00000018587-9987.342ENSCPOG00000001582U2AF29987.764Cavia_porcellus
ENSCGRG00000018587-9987.342ENSCCAG00000023336U2AF29987.764Cebus_capucinus
ENSCGRG00000018587-9988.085ENSCATG00000004637U2AF29988.511Cercocebus_atys
ENSCGRG00000018587-9988.085ENSCLAG00000000596U2AF29988.511Chinchilla_lanigera
ENSCGRG00000018587-9988.085ENSCSAG00000001722U2AF29988.511Chlorocebus_sabaeus
ENSCGRG00000018587-8389.646ENSCPBG00000004485U2AF29992.810Chrysemys_picta_bellii
ENSCGRG00000018587-8367.008ENSCING00000003455-8067.008Ciona_intestinalis
ENSCGRG00000018587-8266.321ENSCSAVG00000006813-8864.146Ciona_savignyi
ENSCGRG00000018587-9187.617ENSCANG00000031002-9688.084Colobus_angolensis_palliatus
ENSCGRG00000018587-9980.127ENSCANG00000043845-9980.973Colobus_angolensis_palliatus
ENSCGRG00000018587-9987.342ENSCGRG00001003185-9987.764Cricetulus_griseus_chok1gshd
ENSCGRG00000018587-100100.000ENSCGRG00001007486-100100.000Cricetulus_griseus_chok1gshd
ENSCGRG00000018587-6585.897ENSCSEG00000018709u2af2a8085.897Cynoglossus_semilaevis
ENSCGRG00000018587-9969.280ENSCSEG00000020504-8875.126Cynoglossus_semilaevis
ENSCGRG00000018587-9971.215ENSCVAG00000023307-10070.576Cyprinodon_variegatus
ENSCGRG00000018587-9980.384ENSCVAG00000001259u2af2a9980.384Cyprinodon_variegatus
ENSCGRG00000018587-9975.732ENSDARG00000012505u2af2a9977.871Danio_rerio
ENSCGRG00000018587-9971.919ENSDARG00000011740u2af2b9976.939Danio_rerio
ENSCGRG00000018587-9187.617ENSDNOG00000047039U2AF29688.084Dasypus_novemcinctus
ENSCGRG00000018587-9987.342ENSDORG00000003250U2af29987.764Dipodomys_ordii
ENSCGRG00000018587-8151.365FBgn0034834LS28651.365Drosophila_melanogaster
ENSCGRG00000018587-8368.367FBgn0005411U2af5010068.378Drosophila_melanogaster
ENSCGRG00000018587-8160.526ENSEBUG00000001732U2AF29059.113Eptatretus_burgeri
ENSCGRG00000018587-9070.824ENSEBUG00000010917U2AF28972.840Eptatretus_burgeri
ENSCGRG00000018587-8491.250ENSEASG00005020708U2AF27991.250Equus_asinus_asinus
ENSCGRG00000018587-9984.829ENSECAG00000010110U2AF29985.075Equus_caballus
ENSCGRG00000018587-9977.070ENSELUG00000022291u2af2b9976.695Esox_lucius
ENSCGRG00000018587-9969.296ENSELUG00000018459-10068.017Esox_lucius
ENSCGRG00000018587-9978.958ENSELUG00000015850u2af2a9978.661Esox_lucius
ENSCGRG00000018587-9987.342ENSFCAG00000011504U2AF29987.764Felis_catus
ENSCGRG00000018587-8791.748ENSFDAG00000011264U2AF28791.748Fukomys_damarensis
ENSCGRG00000018587-9980.000ENSFHEG00000016025u2af2a9980.213Fundulus_heteroclitus
ENSCGRG00000018587-9979.787ENSGMOG00000004535u2af2a9979.325Gadus_morhua
ENSCGRG00000018587-9884.382ENSGALG00000052748U2AF26584.599Gallus_gallus
ENSCGRG00000018587-9980.384ENSGAFG00000013626u2af2a8880.384Gambusia_affinis
ENSCGRG00000018587-9968.922ENSGAFG00000005628-10069.723Gambusia_affinis
ENSCGRG00000018587-9969.831ENSGACG00000014500-10067.230Gasterosteus_aculeatus
ENSCGRG00000018587-9979.574ENSGACG00000010632U2AF29979.618Gasterosteus_aculeatus
ENSCGRG00000018587-6592.810ENSGAGG00000011849U2AF29992.810Gopherus_agassizii
ENSCGRG00000018587-5583.203ENSGGOG00000036399-9683.203Gorilla_gorilla
ENSCGRG00000018587-9971.002ENSHBUG00000017424-10070.149Haplochromis_burtoni
ENSCGRG00000018587-9980.810ENSHBUG00000013935u2af2a9387.065Haplochromis_burtoni
ENSCGRG00000018587-9987.342ENSHGLG00000005889U2AF29987.764Heterocephalus_glaber_female
ENSCGRG00000018587-8791.748ENSHGLG00100004757U2AF29091.748Heterocephalus_glaber_male
ENSCGRG00000018587-9977.615ENSHCOG00000019367u2af2a9978.151Hippocampus_comes
ENSCGRG00000018587-9968.803ENSIPUG00000009844-10065.672Ictalurus_punctatus
ENSCGRG00000018587-9977.707ENSIPUG00000007717u2af2a9976.827Ictalurus_punctatus
ENSCGRG00000018587-9975.906ENSIPUG00000009077u2af29976.891Ictalurus_punctatus
ENSCGRG00000018587-9987.342ENSSTOG00000019595U2AF29987.764Ictidomys_tridecemlineatus
ENSCGRG00000018587-9987.342ENSJJAG00000017705U2af29987.764Jaculus_jaculus
ENSCGRG00000018587-9980.171ENSKMAG00000005960u2af2a9980.171Kryptolebias_marmoratus
ENSCGRG00000018587-9569.737ENSLBEG00000005001-8973.608Labrus_bergylta
ENSCGRG00000018587-9980.171ENSLBEG00000016162u2af2a9980.171Labrus_bergylta
ENSCGRG00000018587-7891.257ENSLACG00000001648U2AF29991.257Latimeria_chalumnae
ENSCGRG00000018587-5889.416ENSLOCG00000008050u2af2b7989.416Lepisosteus_oculatus
ENSCGRG00000018587-9969.118ENSLOCG00000010843-10070.362Lepisosteus_oculatus
ENSCGRG00000018587-9980.638ENSLAFG00000028496-9979.149Loxodonta_africana
ENSCGRG00000018587-9986.920ENSLAFG00000018056-9987.342Loxodonta_africana
ENSCGRG00000018587-9987.342ENSMFAG00000038383U2AF29987.764Macaca_fascicularis
ENSCGRG00000018587-9987.131ENSMMUG00000004810U2AF29987.553Macaca_mulatta
ENSCGRG00000018587-9988.085ENSMNEG00000042096U2AF29988.511Macaca_nemestrina
ENSCGRG00000018587-8792.647ENSMLEG00000032219U2AF28092.647Mandrillus_leucophaeus
ENSCGRG00000018587-9968.657ENSMAMG00000020158-10069.083Mastacembelus_armatus
ENSCGRG00000018587-9979.202ENSMAMG00000019817u2af2a9979.368Mastacembelus_armatus
ENSCGRG00000018587-9971.002ENSMZEG00005023318-10070.149Maylandia_zebra
ENSCGRG00000018587-9980.810ENSMZEG00005016563u2af2a9980.810Maylandia_zebra
ENSCGRG00000018587-8791.748ENSMAUG00000008180U2af28891.748Mesocricetus_auratus
ENSCGRG00000018587-9988.085ENSMICG00000027681U2AF29988.511Microcebus_murinus
ENSCGRG00000018587-9987.342ENSMOCG00000013214-9987.764Microtus_ochrogaster
ENSCGRG00000018587-6589.869ENSMOCG00000001018-9989.869Microtus_ochrogaster
ENSCGRG00000018587-9984.222ENSMOCG00000007227-9982.516Microtus_ochrogaster
ENSCGRG00000018587-9963.768ENSMMOG00000000531-8771.675Mola_mola
ENSCGRG00000018587-8188.947ENSMMOG00000016600u2af2a9088.432Mola_mola
ENSCGRG00000018587-9980.467ENSMALG00000009985u2af2a9979.574Monopterus_albus
ENSCGRG00000018587-9988.085MGP_CAROLIEiJ_G0029150U2af29988.511Mus_caroli
ENSCGRG00000018587-9988.085ENSMUSG00000030435U2af29993.137Mus_musculus
ENSCGRG00000018587-9988.085MGP_PahariEiJ_G0021017U2af29988.511Mus_pahari
ENSCGRG00000018587-9988.085MGP_SPRETEiJ_G0030203U2af29988.511Mus_spretus
ENSCGRG00000018587-9988.085ENSMPUG00000007135U2AF29988.511Mustela_putorius_furo
ENSCGRG00000018587-5087.917ENSMLUG00000011051-9987.917Myotis_lucifugus
ENSCGRG00000018587-9987.131ENSNGAG00000020369U2af29987.553Nannospalax_galili
ENSCGRG00000018587-9570.614ENSNBRG00000011100-8974.576Neolamprologus_brichardi
ENSCGRG00000018587-9980.810ENSNBRG00000002568u2af2a9387.065Neolamprologus_brichardi
ENSCGRG00000018587-9973.895ENSNLEG00000010562U2AF29993.137Nomascus_leucogenys
ENSCGRG00000018587-8779.167ENSMEUG00000002346U2AF29079.167Notamacropus_eugenii
ENSCGRG00000018587-9982.489ENSODEG00000012729-9982.911Octodon_degus
ENSCGRG00000018587-9865.652ENSODEG00000009254-9863.834Octodon_degus
ENSCGRG00000018587-9971.002ENSONIG00000009682-10070.149Oreochromis_niloticus
ENSCGRG00000018587-9979.253ENSONIG00000012793u2af2a9980.508Oreochromis_niloticus
ENSCGRG00000018587-9979.744ENSORLG00000011545u2af2a9979.744Oryzias_latipes
ENSCGRG00000018587-9979.744ENSORLG00020006941u2af2a9979.744Oryzias_latipes_hni
ENSCGRG00000018587-9979.744ENSORLG00015012843u2af2a9979.744Oryzias_latipes_hsok
ENSCGRG00000018587-9980.171ENSOMEG00000011386u2af2a9979.915Oryzias_melastigma
ENSCGRG00000018587-9987.342ENSOGAG00000007206-9987.764Otolemur_garnettii
ENSCGRG00000018587-9653.392ENSOGAG00000034729-7860.490Otolemur_garnettii
ENSCGRG00000018587-9981.250ENSOARG00000001091U2AF29981.042Ovis_aries
ENSCGRG00000018587-9987.342ENSPPAG00000039782U2AF29987.764Pan_paniscus
ENSCGRG00000018587-9987.342ENSPPRG00000013843U2AF29987.764Panthera_pardus
ENSCGRG00000018587-9979.744ENSPTIG00000005489U2AF28986.441Panthera_tigris_altaica
ENSCGRG00000018587-9987.342ENSPTRG00000011523U2AF29993.137Pan_troglodytes
ENSCGRG00000018587-9988.085ENSPANG00000008459U2AF29988.511Papio_anubis
ENSCGRG00000018587-9981.237ENSPKIG00000024346u2af2b9386.139Paramormyrops_kingsleyae
ENSCGRG00000018587-9972.458ENSPKIG00000014878-10069.231Paramormyrops_kingsleyae
ENSCGRG00000018587-8768.009ENSPSIG00000008014U2AF29068.009Pelodiscus_sinensis
ENSCGRG00000018587-8181.841ENSPMGG00000022980u2af2a9179.661Periophthalmus_magnuspinnatus
ENSCGRG00000018587-9987.342ENSPEMG00000007378U2af29993.137Peromyscus_maniculatus_bairdii
ENSCGRG00000018587-8174.740ENSPMAG00000004097u2af2a8675.567Petromyzon_marinus
ENSCGRG00000018587-9986.709ENSPCIG00000018013U2AF29987.131Phascolarctos_cinereus
ENSCGRG00000018587-9980.384ENSPFOG00000010799u2af2a10080.384Poecilia_formosa
ENSCGRG00000018587-9968.922ENSPFOG00000006433-10069.723Poecilia_formosa
ENSCGRG00000018587-9980.384ENSPLAG00000014365u2af2a9980.384Poecilia_latipinna
ENSCGRG00000018587-9073.832ENSPLAG00000003275-8976.238Poecilia_latipinna
ENSCGRG00000018587-9980.384ENSPMEG00000002969u2af2a9980.384Poecilia_mexicana
ENSCGRG00000018587-9073.131ENSPMEG00000003734-8975.495Poecilia_mexicana
ENSCGRG00000018587-9980.384ENSPREG00000008739u2af2a9980.384Poecilia_reticulata
ENSCGRG00000018587-9969.231ENSPREG00000013036-10070.270Poecilia_reticulata
ENSCGRG00000018587-5890.614ENSPPYG00000010429-7890.614Pongo_abelii
ENSCGRG00000018587-9972.421ENSPCAG00000014399-9972.842Procavia_capensis
ENSCGRG00000018587-8777.641ENSPCAG00000003709-9977.641Procavia_capensis
ENSCGRG00000018587-9987.342ENSPCOG00000025870U2AF29987.764Propithecus_coquereli
ENSCGRG00000018587-9986.920ENSPVAG00000004540U2AF29987.342Pteropus_vampyrus
ENSCGRG00000018587-9971.002ENSPNYG00000011605-10070.149Pundamilia_nyererei
ENSCGRG00000018587-9980.810ENSPNYG00000001438u2af2a9387.065Pundamilia_nyererei
ENSCGRG00000018587-9979.318ENSPNAG00000027289u2af2b9978.891Pygocentrus_nattereri
ENSCGRG00000018587-9970.789ENSPNAG00000007182-10069.017Pygocentrus_nattereri
ENSCGRG00000018587-9977.848ENSPNAG00000017620u2af2a9977.662Pygocentrus_nattereri
ENSCGRG00000018587-9988.085ENSRNOG00000015914U2af29988.511Rattus_norvegicus
ENSCGRG00000018587-9987.131ENSRBIG00000041018U2AF29987.553Rhinopithecus_bieti
ENSCGRG00000018587-8191.969ENSRROG00000031103-8992.120Rhinopithecus_roxellana
ENSCGRG00000018587-9983.191ENSRROG00000031238-9983.830Rhinopithecus_roxellana
ENSCGRG00000018587-9988.085ENSSBOG00000023891U2AF29988.511Saimiri_boliviensis_boliviensis
ENSCGRG00000018587-5374.916ENSSHAG00000001167U2AF26974.916Sarcophilus_harrisii
ENSCGRG00000018587-9972.246ENSSFOG00015003884-9377.378Scleropages_formosus
ENSCGRG00000018587-8387.949ENSSFOG00015019182u2af2b8887.949Scleropages_formosus
ENSCGRG00000018587-9971.002ENSSMAG00000013779-10069.936Scophthalmus_maximus
ENSCGRG00000018587-9979.318ENSSMAG00000012582u2af2a9979.531Scophthalmus_maximus
ENSCGRG00000018587-9570.306ENSSDUG00000021434-8474.217Seriola_dumerili
ENSCGRG00000018587-9980.384ENSSDUG00000009457u2af2a10080.384Seriola_dumerili
ENSCGRG00000018587-9570.306ENSSLDG00000016151-8974.217Seriola_lalandi_dorsalis
ENSCGRG00000018587-9980.384ENSSLDG00000022742u2af2a9980.384Seriola_lalandi_dorsalis
ENSCGRG00000018587-9983.682ENSSPUG00000010229U2AF29984.100Sphenodon_punctatus
ENSCGRG00000018587-9980.597ENSSPAG00000022519u2af2a9980.597Stegastes_partitus
ENSCGRG00000018587-9970.789ENSSPAG00000005241-10069.936Stegastes_partitus
ENSCGRG00000018587-9988.085ENSSSCG00000034815U2AF29988.511Sus_scrofa
ENSCGRG00000018587-8186.316ENSTRUG00000005514u2af2a8984.080Takifugu_rubripes
ENSCGRG00000018587-8476.845ENSTNIG00000011257-10068.298Tetraodon_nigroviridis
ENSCGRG00000018587-9980.467ENSTNIG00000008106U2AF29980.042Tetraodon_nigroviridis
ENSCGRG00000018587-7788.618ENSTBEG00000009104U2AF29988.618Tupaia_belangeri
ENSCGRG00000018587-9987.342ENSTTRG00000000987U2AF29987.764Tursiops_truncatus
ENSCGRG00000018587-8391.919ENSUAMG00000019883U2AF28791.919Ursus_americanus
ENSCGRG00000018587-8391.919ENSUMAG00000024586U2AF29993.137Ursus_maritimus
ENSCGRG00000018587-8792.647ENSVVUG00000006956U2AF26092.647Vulpes_vulpes
ENSCGRG00000018587-9981.381ENSXETG00000019128u2af29981.405Xenopus_tropicalis
ENSCGRG00000018587-8189.211ENSXCOG00000019406u2af2a9286.816Xiphophorus_couchianus
ENSCGRG00000018587-9971.002ENSXMAG00000000768-9669.936Xiphophorus_maculatus
ENSCGRG00000018587-9980.384ENSXMAG00000011979u2af2a9980.384Xiphophorus_maculatus

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