EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000018699 (Gene tree)
Gene ID: -
Gene Symbol: Pabpc5
Alias: -
Full Name: poly(A) binding protein cytoplasmic 5
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 1149 bases
Position: chrJH001696.1:238504-239652
Accession: 100766161
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000025705	RRM_5	PF13893.6	2.1e-11	1	3
ENSCGRP00000025705	RRM_5	PF13893.6	2.1e-11	2	3
ENSCGRP00000025705	RRM_5	PF13893.6	2.1e-11	3	3
ENSCGRP00000025705	RRM_1	PF00076.22	1e-75	1	4
ENSCGRP00000025705	RRM_1	PF00076.22	1e-75	2	4
ENSCGRP00000025705	RRM_1	PF00076.22	1e-75	3	4
ENSCGRP00000025705	RRM_1	PF00076.22	1e-75	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000026067	-	1149	XM_003511922	ENSCGRP00000025705	382 (aa)	XP_003511970	G3IAD8

Gene Model

Click here to download ENSCGRG00000018699's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000018699's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000018699	Pabpc5	94	31.282	ENSCGRG00000001625	Elavl1	96	31.282
ENSCGRG00000018699	Pabpc5	94	34.568	ENSCGRG00000000487	Elavl2	89	34.568
ENSCGRG00000018699	Pabpc5	95	30.508	ENSCGRG00000014532	Trnau1ap	61	30.061
ENSCGRG00000018699	Pabpc5	94	63.279	ENSCGRG00000006487	-	55	63.279
ENSCGRG00000018699	Pabpc5	96	58.904	ENSCGRG00000020086	Pabpc4l	98	58.824
ENSCGRG00000018699	Pabpc5	95	58.445	ENSCGRG00000019560	Pabpc6	59	58.470
ENSCGRG00000018699	Pabpc5	98	65.278	ENSCGRG00000009777	Pabpc4	67	65.169
ENSCGRG00000018699	Pabpc5	95	56.111	ENSCGRG00000007946	Pabpc1l	63	56.180

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000018699	Pabpc5	99	94.226	ENSG00000174740	PABPC5	99	94.226	Homo_sapiens
ENSCGRG00000018699	Pabpc5	99	93.701	ENSAMEG00000020114	PABPC5	100	93.701	Ailuropoda_melanoleuca
ENSCGRG00000018699	Pabpc5	99	94.226	ENSANAG00000005063	PABPC5	99	94.226	Aotus_nancymaae
ENSCGRG00000018699	Pabpc5	100	93.194	ENSBTAG00000019942	PABPC5	100	93.194	Bos_taurus
ENSCGRG00000018699	Pabpc5	99	93.701	ENSCJAG00000003665	PABPC5	99	93.701	Callithrix_jacchus
ENSCGRG00000018699	Pabpc5	100	93.455	ENSCAFG00000017452	PABPC5	100	93.455	Canis_familiaris
ENSCGRG00000018699	Pabpc5	100	93.194	ENSCHIG00000019004	PABPC5	100	93.194	Capra_hircus
ENSCGRG00000018699	Pabpc5	100	93.717	ENSTSYG00000036351	PABPC5	100	93.717	Carlito_syrichta
ENSCGRG00000018699	Pabpc5	99	85.340	ENSCAPG00000010714	PABPC5	100	85.340	Cavia_aperea
ENSCGRG00000018699	Pabpc5	100	92.670	ENSCPOG00000002555	PABPC5	100	92.670	Cavia_porcellus
ENSCGRG00000018699	Pabpc5	99	94.226	ENSCCAG00000032154	PABPC5	99	94.226	Cebus_capucinus
ENSCGRG00000018699	Pabpc5	99	94.488	ENSCATG00000043083	PABPC5	99	94.488	Cercocebus_atys
ENSCGRG00000018699	Pabpc5	100	92.932	ENSCLAG00000000647	PABPC5	100	92.932	Chinchilla_lanigera
ENSCGRG00000018699	Pabpc5	99	94.488	ENSCSAG00000000065	PABPC5	99	94.488	Chlorocebus_sabaeus
ENSCGRG00000018699	Pabpc5	99	94.488	ENSCANG00000011473	PABPC5	99	94.488	Colobus_angolensis_palliatus
ENSCGRG00000018699	Pabpc5	100	75.979	ENSETEG00000011832	PABPC5	100	75.979	Echinops_telfairi
ENSCGRG00000018699	Pabpc5	100	93.979	ENSEASG00005014396	PABPC5	100	93.979	Equus_asinus_asinus
ENSCGRG00000018699	Pabpc5	100	93.979	ENSECAG00000003452	PABPC5	100	93.979	Equus_caballus
ENSCGRG00000018699	Pabpc5	100	93.455	ENSFCAG00000004998	PABPC5	100	93.455	Felis_catus
ENSCGRG00000018699	Pabpc5	100	92.932	ENSFDAG00000000126	PABPC5	100	92.932	Fukomys_damarensis
ENSCGRG00000018699	Pabpc5	99	94.226	ENSGGOG00000007622	PABPC5	99	94.226	Gorilla_gorilla
ENSCGRG00000018699	Pabpc5	95	93.578	ENSJJAG00000011960	Pabpc5	100	93.578	Jaculus_jaculus
ENSCGRG00000018699	Pabpc5	99	94.488	ENSMFAG00000024561	PABPC5	99	94.488	Macaca_fascicularis
ENSCGRG00000018699	Pabpc5	99	94.488	ENSMMUG00000011562	PABPC5	99	94.488	Macaca_mulatta
ENSCGRG00000018699	Pabpc5	99	94.488	ENSMNEG00000037604	PABPC5	99	94.488	Macaca_nemestrina
ENSCGRG00000018699	Pabpc5	99	94.488	ENSMLEG00000028318	PABPC5	99	94.488	Mandrillus_leucophaeus
ENSCGRG00000018699	Pabpc5	100	93.455	ENSMICG00000041706	PABPC5	100	93.455	Microcebus_murinus
ENSCGRG00000018699	Pabpc5	100	93.717	ENSMOCG00000001554	Pabpc5	100	93.717	Microtus_ochrogaster
ENSCGRG00000018699	Pabpc5	99	91.579	MGP_CAROLIEiJ_G0033367	Pabpc5	99	91.579	Mus_caroli
ENSCGRG00000018699	Pabpc5	99	92.105	ENSMUSG00000034732	Pabpc5	99	92.105	Mus_musculus
ENSCGRG00000018699	Pabpc5	100	92.408	MGP_PahariEiJ_G0031908	Pabpc5	100	92.408	Mus_pahari
ENSCGRG00000018699	Pabpc5	99	92.105	MGP_SPRETEiJ_G0034533	Pabpc5	99	92.105	Mus_spretus
ENSCGRG00000018699	Pabpc5	100	92.932	ENSMPUG00000018465	PABPC5	100	92.932	Mustela_putorius_furo
ENSCGRG00000018699	Pabpc5	100	92.932	ENSMLUG00000008244	PABPC5	100	92.932	Myotis_lucifugus
ENSCGRG00000018699	Pabpc5	95	92.661	ENSNGAG00000004371	Pabpc5	100	92.661	Nannospalax_galili
ENSCGRG00000018699	Pabpc5	99	94.226	ENSNLEG00000035086	PABPC5	99	94.226	Nomascus_leucogenys
ENSCGRG00000018699	Pabpc5	98	94.570	ENSOPRG00000000856	PABPC5	100	94.570	Ochotona_princeps
ENSCGRG00000018699	Pabpc5	100	93.717	ENSOCUG00000010919	PABPC5	100	93.717	Oryctolagus_cuniculus
ENSCGRG00000018699	Pabpc5	100	93.979	ENSOGAG00000006882	PABPC5	100	93.979	Otolemur_garnettii
ENSCGRG00000018699	Pabpc5	100	93.455	ENSOARG00000010260	PABPC5	100	93.455	Ovis_aries
ENSCGRG00000018699	Pabpc5	99	93.963	ENSPPAG00000007378	PABPC5	99	93.963	Pan_paniscus
ENSCGRG00000018699	Pabpc5	100	93.455	ENSPPRG00000010742	PABPC5	100	93.455	Panthera_pardus
ENSCGRG00000018699	Pabpc5	100	93.455	ENSPTIG00000001480	PABPC5	100	93.455	Panthera_tigris_altaica
ENSCGRG00000018699	Pabpc5	99	94.226	ENSPTRG00000022078	PABPC5	99	94.226	Pan_troglodytes
ENSCGRG00000018699	Pabpc5	99	94.488	ENSPANG00000018282	PABPC5	99	94.488	Papio_anubis
ENSCGRG00000018699	Pabpc5	100	93.455	ENSPEMG00000000171	Pabpc5	100	93.455	Peromyscus_maniculatus_bairdii
ENSCGRG00000018699	Pabpc5	99	94.226	ENSPPYG00000020526	PABPC5	99	94.226	Pongo_abelii
ENSCGRG00000018699	Pabpc5	99	94.182	ENSPCAG00000015577	PABPC5	100	94.182	Procavia_capensis
ENSCGRG00000018699	Pabpc5	100	93.455	ENSPCOG00000000676	PABPC5	100	93.455	Propithecus_coquereli
ENSCGRG00000018699	Pabpc5	100	93.717	ENSPVAG00000006465	PABPC5	100	93.717	Pteropus_vampyrus
ENSCGRG00000018699	Pabpc5	100	92.408	ENSRNOG00000003354	Pabpc5	100	92.408	Rattus_norvegicus
ENSCGRG00000018699	Pabpc5	99	94.488	ENSRBIG00000011760	PABPC5	99	94.488	Rhinopithecus_bieti
ENSCGRG00000018699	Pabpc5	99	94.488	ENSRROG00000036708	PABPC5	99	94.488	Rhinopithecus_roxellana
ENSCGRG00000018699	Pabpc5	99	93.963	ENSSBOG00000008658	PABPC5	99	93.963	Saimiri_boliviensis_boliviensis
ENSCGRG00000018699	Pabpc5	100	90.838	ENSSARG00000014012	PABPC5	100	90.838	Sorex_araneus
ENSCGRG00000018699	Pabpc5	100	93.717	ENSSSCG00000040194	PABPC5	100	93.717	Sus_scrofa
ENSCGRG00000018699	Pabpc5	100	94.764	ENSTBEG00000016482	PABPC5	100	94.764	Tupaia_belangeri
ENSCGRG00000018699	Pabpc5	100	93.194	ENSUAMG00000013627	PABPC5	100	93.194	Ursus_americanus
ENSCGRG00000018699	Pabpc5	100	92.932	ENSUMAG00000023934	PABPC5	100	92.932	Ursus_maritimus
ENSCGRG00000018699	Pabpc5	100	93.194	ENSVPAG00000001063	PABPC5	100	93.194	Vicugna_pacos
ENSCGRG00000018699	Pabpc5	100	93.717	ENSVVUG00000013172	PABPC5	100	93.717	Vulpes_vulpes