EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000018878 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: small nuclear ribonucleoprotein F-like
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Minus strand
Length: 237 bases
Position: chrJH059254.1:2-238
Accession: 103159049
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000025862	LSM	PF01423.22	5.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000026246	-	237	XM_007608250	ENSCGRP00000025862	79 (aa)	XP_007606440	-

Gene Model

Click here to download ENSCGRG00000018878's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000018878's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000018878	-	82	43.939	ENSCGRG00000008320	Lsm6	83	43.939
ENSCGRG00000018878	-	94	92.000	ENSCGRG00000000336	-	93	92.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000018878	-	94	92.000	ENSG00000139343	SNRPF	93	92.500	Homo_sapiens
ENSCGRG00000018878	-	91	90.411	ENSAPOG00000003377	snrpf	61	91.026	Acanthochromis_polyacanthus
ENSCGRG00000018878	-	91	93.151	ENSAMEG00000002166	-	92	93.590	Ailuropoda_melanoleuca
ENSCGRG00000018878	-	95	78.947	ENSAMEG00000018718	-	93	80.000	Ailuropoda_melanoleuca
ENSCGRG00000018878	-	92	90.541	ENSACIG00000013216	snrpf	93	91.139	Amphilophus_citrinellus
ENSCGRG00000018878	-	92	90.541	ENSAOCG00000015108	snrpf	93	91.139	Amphiprion_ocellaris
ENSCGRG00000018878	-	92	90.541	ENSAPEG00000022022	snrpf	93	91.139	Amphiprion_percula
ENSCGRG00000018878	-	91	90.411	ENSATEG00000022625	snrpf	84	91.026	Anabas_testudineus
ENSCGRG00000018878	-	97	94.872	ENSACAG00000014073	SNRPF	90	94.872	Anolis_carolinensis
ENSCGRG00000018878	-	89	84.507	ENSANAG00000020297	-	70	85.526	Aotus_nancymaae
ENSCGRG00000018878	-	94	92.000	ENSANAG00000032845	SNRPF	93	92.500	Aotus_nancymaae
ENSCGRG00000018878	-	94	66.216	ENSANAG00000025860	-	92	68.354	Aotus_nancymaae
ENSCGRG00000018878	-	92	90.541	ENSACLG00000016066	snrpf	93	91.139	Astatotilapia_calliptera
ENSCGRG00000018878	-	94	86.667	ENSAMXG00000007421	snrpf	93	87.500	Astyanax_mexicanus
ENSCGRG00000018878	-	97	85.897	ENSBTAG00000050012	-	96	85.897	Bos_taurus
ENSCGRG00000018878	-	94	92.000	ENSBTAG00000016271	SNRPF	93	92.500	Bos_taurus
ENSCGRG00000018878	-	99	68.354	WBGene00004918	snr-5	93	68.354	Caenorhabditis_elegans
ENSCGRG00000018878	-	94	92.000	ENSCJAG00000002705	-	93	92.500	Callithrix_jacchus
ENSCGRG00000018878	-	94	92.000	ENSCAFG00000006395	-	72	92.500	Canis_familiaris
ENSCGRG00000018878	-	91	84.932	ENSCAFG00000031151	-	93	86.250	Canis_familiaris
ENSCGRG00000018878	-	91	84.932	ENSCAFG00020010823	-	93	86.250	Canis_lupus_dingo
ENSCGRG00000018878	-	94	84.000	ENSCAFG00020013161	-	80	84.000	Canis_lupus_dingo
ENSCGRG00000018878	-	99	87.342	ENSTSYG00000031636	-	66	87.342	Carlito_syrichta
ENSCGRG00000018878	-	94	86.667	ENSTSYG00000036502	-	93	87.500	Carlito_syrichta
ENSCGRG00000018878	-	94	81.333	ENSTSYG00000030635	-	93	82.500	Carlito_syrichta
ENSCGRG00000018878	-	91	93.151	ENSCAPG00000007242	SNRPF	92	93.590	Cavia_aperea
ENSCGRG00000018878	-	94	92.000	ENSCPOG00000013898	SNRPF	93	92.500	Cavia_porcellus
ENSCGRG00000018878	-	94	92.000	ENSCCAG00000037378	-	93	92.500	Cebus_capucinus
ENSCGRG00000018878	-	96	85.714	ENSCCAG00000033627	-	61	85.714	Cebus_capucinus
ENSCGRG00000018878	-	91	91.781	ENSCCAG00000017356	-	93	91.250	Cebus_capucinus
ENSCGRG00000018878	-	94	92.000	ENSCLAG00000007200	SNRPF	93	92.500	Chinchilla_lanigera
ENSCGRG00000018878	-	94	92.000	ENSCSAG00000003602	-	65	92.500	Chlorocebus_sabaeus
ENSCGRG00000018878	-	80	90.625	ENSCHOG00000009392	SNRPF	100	90.625	Choloepus_hoffmanni
ENSCGRG00000018878	-	94	84.000	ENSCPBG00000006227	-	93	85.000	Chrysemys_picta_bellii
ENSCGRG00000018878	-	100	83.750	ENSCPBG00000026463	-	93	83.750	Chrysemys_picta_bellii
ENSCGRG00000018878	-	96	88.312	ENSCPBG00000024287	-	62	88.312	Chrysemys_picta_bellii
ENSCGRG00000018878	-	99	82.278	ENSCPBG00000001985	-	94	82.278	Chrysemys_picta_bellii
ENSCGRG00000018878	-	97	82.051	ENSCSAVG00000007498	-	89	82.051	Ciona_savignyi
ENSCGRG00000018878	-	94	92.000	ENSCGRG00001017100	-	93	92.500	Cricetulus_griseus_chok1gshd
ENSCGRG00000018878	-	100	100.000	ENSCGRG00001008965	-	62	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000018878	-	94	88.000	ENSCSEG00000004748	snrpf	93	88.750	Cynoglossus_semilaevis
ENSCGRG00000018878	-	91	90.411	ENSCVAG00000000397	snrpf	62	91.026	Cyprinodon_variegatus
ENSCGRG00000018878	-	94	87.013	ENSDARG00000105037	snrpf	93	87.805	Danio_rerio
ENSCGRG00000018878	-	94	78.667	ENSDNOG00000049373	-	70	80.000	Dasypus_novemcinctus
ENSCGRG00000018878	-	94	90.667	ENSDNOG00000048989	-	71	91.250	Dasypus_novemcinctus
ENSCGRG00000018878	-	94	92.000	ENSDNOG00000043775	-	51	92.500	Dasypus_novemcinctus
ENSCGRG00000018878	-	90	80.556	ENSDORG00000025351	-	100	80.556	Dipodomys_ordii
ENSCGRG00000018878	-	73	91.525	ENSDORG00000029740	-	78	92.188	Dipodomys_ordii
ENSCGRG00000018878	-	97	74.359	FBgn0000426	SmF	89	74.359	Drosophila_melanogaster
ENSCGRG00000018878	-	94	92.000	ENSETEG00000001558	-	93	92.500	Echinops_telfairi
ENSCGRG00000018878	-	95	75.325	ENSEBUG00000001793	-	83	75.325	Eptatretus_burgeri
ENSCGRG00000018878	-	94	92.000	ENSECAG00000019817	SNRPF	65	92.500	Equus_caballus
ENSCGRG00000018878	-	91	93.151	ENSEEUG00000013509	SNRPF	92	93.590	Erinaceus_europaeus
ENSCGRG00000018878	-	94	89.333	ENSELUG00000003121	RUXF	93	90.000	Esox_lucius
ENSCGRG00000018878	-	94	88.000	ENSELUG00000007737	RUXF	92	88.750	Esox_lucius
ENSCGRG00000018878	-	94	92.000	ENSFCAG00000029966	-	93	92.500	Felis_catus
ENSCGRG00000018878	-	94	72.000	ENSFCAG00000031148	-	73	73.750	Felis_catus
ENSCGRG00000018878	-	94	69.333	ENSFCAG00000021942	-	93	71.250	Felis_catus
ENSCGRG00000018878	-	91	93.151	ENSFALG00000010799	SNRPF	91	93.590	Ficedula_albicollis
ENSCGRG00000018878	-	94	92.000	ENSFDAG00000002831	-	93	92.500	Fukomys_damarensis
ENSCGRG00000018878	-	91	90.411	ENSFHEG00000003240	snrpf	68	91.026	Fundulus_heteroclitus
ENSCGRG00000018878	-	91	90.411	ENSGMOG00000007741	snrpf	92	91.026	Gadus_morhua
ENSCGRG00000018878	-	94	92.000	ENSGALG00000011409	SNRPF	93	92.500	Gallus_gallus
ENSCGRG00000018878	-	92	89.189	ENSGAFG00000016187	snrpf	91	89.873	Gambusia_affinis
ENSCGRG00000018878	-	91	89.041	ENSGACG00000020055	snrpf	92	89.744	Gasterosteus_aculeatus
ENSCGRG00000018878	-	84	88.060	ENSGAGG00000012945	-	72	86.076	Gopherus_agassizii
ENSCGRG00000018878	-	67	83.333	ENSGAGG00000011163	-	95	83.333	Gopherus_agassizii
ENSCGRG00000018878	-	77	87.097	ENSGAGG00000020974	-	52	87.097	Gopherus_agassizii
ENSCGRG00000018878	-	86	78.261	ENSGAGG00000014132	-	96	71.250	Gopherus_agassizii
ENSCGRG00000018878	-	91	84.932	ENSGAGG00000022991	-	86	84.932	Gopherus_agassizii
ENSCGRG00000018878	-	94	70.667	ENSGGOG00000039936	-	90	72.500	Gorilla_gorilla
ENSCGRG00000018878	-	99	70.513	ENSGGOG00000039564	-	96	70.513	Gorilla_gorilla
ENSCGRG00000018878	-	94	92.000	ENSGGOG00000001127	-	93	93.671	Gorilla_gorilla
ENSCGRG00000018878	-	94	92.000	ENSHGLG00000009108	SNRPF	93	92.500	Heterocephalus_glaber_female
ENSCGRG00000018878	-	94	90.667	ENSHGLG00000021172	-	93	91.250	Heterocephalus_glaber_female
ENSCGRG00000018878	-	94	90.667	ENSHGLG00100019596	-	93	91.250	Heterocephalus_glaber_male
ENSCGRG00000018878	-	91	93.151	ENSHGLG00100008103	-	92	93.590	Heterocephalus_glaber_male
ENSCGRG00000018878	-	80	77.465	ENSHCOG00000018663	snrpf	55	77.465	Hippocampus_comes
ENSCGRG00000018878	-	94	89.333	ENSIPUG00000018994	snrpf	93	91.139	Ictalurus_punctatus
ENSCGRG00000018878	-	94	92.000	ENSSTOG00000010434	-	93	92.500	Ictidomys_tridecemlineatus
ENSCGRG00000018878	-	99	79.747	ENSJJAG00000010502	-	94	79.747	Jaculus_jaculus
ENSCGRG00000018878	-	94	92.000	ENSJJAG00000011272	-	93	92.500	Jaculus_jaculus
ENSCGRG00000018878	-	75	86.667	ENSJJAG00000004828	-	92	86.667	Jaculus_jaculus
ENSCGRG00000018878	-	99	75.949	ENSJJAG00000004558	-	94	75.949	Jaculus_jaculus
ENSCGRG00000018878	-	94	90.667	ENSKMAG00000013566	snrpf	93	91.250	Kryptolebias_marmoratus
ENSCGRG00000018878	-	94	88.000	ENSLBEG00000008800	snrpf	93	88.750	Labrus_bergylta
ENSCGRG00000018878	-	91	93.151	ENSLACG00000002456	-	67	93.590	Latimeria_chalumnae
ENSCGRG00000018878	-	94	86.667	ENSLOCG00000015744	snrpf	93	87.500	Lepisosteus_oculatus
ENSCGRG00000018878	-	91	93.151	ENSLAFG00000017426	SNRPF	91	93.590	Loxodonta_africana
ENSCGRG00000018878	-	92	89.189	ENSMAMG00000016593	snrpf	93	89.873	Mastacembelus_armatus
ENSCGRG00000018878	-	92	90.541	ENSMZEG00005014701	snrpf	93	91.139	Maylandia_zebra
ENSCGRG00000018878	-	91	93.151	ENSMGAG00000011453	-	70	93.590	Meleagris_gallopavo
ENSCGRG00000018878	-	96	70.130	ENSMAUG00000010289	-	92	70.130	Mesocricetus_auratus
ENSCGRG00000018878	-	78	92.063	ENSMAUG00000019737	-	92	92.647	Mesocricetus_auratus
ENSCGRG00000018878	-	78	92.063	ENSMAUG00000016909	-	92	92.647	Mesocricetus_auratus
ENSCGRG00000018878	-	94	88.000	ENSMAUG00000008799	-	93	88.750	Mesocricetus_auratus
ENSCGRG00000018878	-	94	92.000	ENSMICG00000012153	-	93	92.500	Microcebus_murinus
ENSCGRG00000018878	-	94	86.667	ENSMICG00000030494	-	64	87.500	Microcebus_murinus
ENSCGRG00000018878	-	85	79.104	ENSMOCG00000020220	-	94	79.167	Microtus_ochrogaster
ENSCGRG00000018878	-	94	92.000	ENSMOCG00000020437	Snrpf	93	92.500	Microtus_ochrogaster
ENSCGRG00000018878	-	94	81.081	ENSMOCG00000022166	-	88	81.013	Microtus_ochrogaster
ENSCGRG00000018878	-	91	89.041	ENSMMOG00000007127	snrpf	92	89.744	Mola_mola
ENSCGRG00000018878	-	94	92.000	ENSMODG00000008091	SNRPF	70	92.500	Monodelphis_domestica
ENSCGRG00000018878	-	92	90.541	ENSMALG00000012328	snrpf	93	91.139	Monopterus_albus
ENSCGRG00000018878	-	94	92.000	MGP_CAROLIEiJ_G0015735	-	93	92.500	Mus_caroli
ENSCGRG00000018878	-	94	92.000	ENSMUSG00000020018	Snrpf	93	92.500	Mus_musculus
ENSCGRG00000018878	-	94	92.000	MGP_PahariEiJ_G0031350	Snrpf	93	92.500	Mus_pahari
ENSCGRG00000018878	-	94	92.000	MGP_SPRETEiJ_G0016553	Snrpf	93	92.500	Mus_spretus
ENSCGRG00000018878	-	94	92.000	ENSMPUG00000007176	-	71	92.500	Mustela_putorius_furo
ENSCGRG00000018878	-	91	93.151	ENSMLUG00000013577	-	92	93.590	Myotis_lucifugus
ENSCGRG00000018878	-	94	92.000	ENSMLUG00000029201	-	75	92.500	Myotis_lucifugus
ENSCGRG00000018878	-	91	72.603	ENSMLUG00000026269	-	74	74.359	Myotis_lucifugus
ENSCGRG00000018878	-	94	92.000	ENSMLUG00000027932	-	75	92.500	Myotis_lucifugus
ENSCGRG00000018878	-	94	92.000	ENSMLUG00000026149	-	75	92.500	Myotis_lucifugus
ENSCGRG00000018878	-	94	92.000	ENSNGAG00000024292	-	93	92.500	Nannospalax_galili
ENSCGRG00000018878	-	78	82.540	ENSNGAG00000005851	-	74	82.540	Nannospalax_galili
ENSCGRG00000018878	-	91	90.411	ENSNBRG00000011682	snrpf	80	91.026	Neolamprologus_brichardi
ENSCGRG00000018878	-	91	65.753	ENSMEUG00000000671	SNRPF	92	67.949	Notamacropus_eugenii
ENSCGRG00000018878	-	94	92.000	ENSODEG00000010328	-	93	93.671	Octodon_degus
ENSCGRG00000018878	-	91	93.151	ENSOCUG00000010925	SNRPF	69	93.590	Oryctolagus_cuniculus
ENSCGRG00000018878	-	91	87.671	ENSORLG00020008216	snrpf	92	88.462	Oryzias_latipes_hni
ENSCGRG00000018878	-	91	87.671	ENSORLG00015007418	snrpf	92	88.462	Oryzias_latipes_hsok
ENSCGRG00000018878	-	92	89.189	ENSOMEG00000003018	snrpf	93	89.873	Oryzias_melastigma
ENSCGRG00000018878	-	94	92.000	ENSOGAG00000030323	-	93	92.500	Otolemur_garnettii
ENSCGRG00000018878	-	94	92.000	ENSOARG00000011853	-	70	92.500	Ovis_aries
ENSCGRG00000018878	-	94	70.667	ENSPPAG00000037544	-	90	72.500	Pan_paniscus
ENSCGRG00000018878	-	99	71.795	ENSPPAG00000037479	-	96	71.795	Pan_paniscus
ENSCGRG00000018878	-	94	92.000	ENSPPRG00000005875	-	93	92.500	Panthera_pardus
ENSCGRG00000018878	-	100	73.750	ENSPPRG00000007449	-	82	73.750	Panthera_pardus
ENSCGRG00000018878	-	94	92.000	ENSPTIG00000007520	SNRPF	93	92.500	Panthera_tigris_altaica
ENSCGRG00000018878	-	94	73.333	ENSPTIG00000005117	-	95	75.000	Panthera_tigris_altaica
ENSCGRG00000018878	-	94	70.667	ENSPTRG00000043814	-	90	72.500	Pan_troglodytes
ENSCGRG00000018878	-	99	71.795	ENSPTRG00000047717	-	96	71.795	Pan_troglodytes
ENSCGRG00000018878	-	91	90.411	ENSPKIG00000014784	snrpf	86	91.026	Paramormyrops_kingsleyae
ENSCGRG00000018878	-	91	93.151	ENSPSIG00000016462	SNRPF	91	93.590	Pelodiscus_sinensis
ENSCGRG00000018878	-	91	89.041	ENSPMGG00000023548	snrpf	92	89.744	Periophthalmus_magnuspinnatus
ENSCGRG00000018878	-	94	92.000	ENSPEMG00000023326	Snrpf	93	92.500	Peromyscus_maniculatus_bairdii
ENSCGRG00000018878	-	92	90.541	ENSPLAG00000023932	snrpf	93	91.139	Poecilia_latipinna
ENSCGRG00000018878	-	92	90.541	ENSPMEG00000003377	snrpf	93	91.139	Poecilia_mexicana
ENSCGRG00000018878	-	92	89.189	ENSPREG00000022635	snrpf	91	89.873	Poecilia_reticulata
ENSCGRG00000018878	-	94	92.000	ENSPPYG00000004847	-	93	92.500	Pongo_abelii
ENSCGRG00000018878	-	94	92.000	ENSPCOG00000023833	-	93	92.500	Propithecus_coquereli
ENSCGRG00000018878	-	94	92.000	ENSPVAG00000009036	SNRPF	93	92.500	Pteropus_vampyrus
ENSCGRG00000018878	-	92	90.541	ENSPNYG00000021712	snrpf	93	91.139	Pundamilia_nyererei
ENSCGRG00000018878	-	92	89.189	ENSPNAG00000019117	snrpf	93	89.873	Pygocentrus_nattereri
ENSCGRG00000018878	-	94	92.000	ENSRNOG00000005556	Snrpf	93	92.500	Rattus_norvegicus
ENSCGRG00000018878	-	94	90.667	ENSRBIG00000030414	-	93	91.250	Rhinopithecus_bieti
ENSCGRG00000018878	-	94	90.667	ENSRROG00000021975	-	93	91.250	Rhinopithecus_roxellana
ENSCGRG00000018878	-	87	54.930	YPR182W	SMX3	83	54.930	Saccharomyces_cerevisiae
ENSCGRG00000018878	-	94	92.000	ENSSBOG00000012868	-	93	91.250	Saimiri_boliviensis_boliviensis
ENSCGRG00000018878	-	94	71.795	ENSSBOG00000027638	-	93	73.494	Saimiri_boliviensis_boliviensis
ENSCGRG00000018878	-	94	92.000	ENSSBOG00000036179	-	93	92.500	Saimiri_boliviensis_boliviensis
ENSCGRG00000018878	-	94	80.000	ENSSBOG00000032297	-	92	80.000	Saimiri_boliviensis_boliviensis
ENSCGRG00000018878	-	91	93.151	ENSSHAG00000012294	SNRPF	70	93.590	Sarcophilus_harrisii
ENSCGRG00000018878	-	78	88.889	ENSSFOG00015021523	snrpf	94	88.889	Scleropages_formosus
ENSCGRG00000018878	-	91	89.041	ENSSMAG00000005533	snrpf	90	89.744	Scophthalmus_maximus
ENSCGRG00000018878	-	81	87.692	ENSSDUG00000016283	snrpf	77	87.692	Seriola_dumerili
ENSCGRG00000018878	-	97	73.077	ENSSLDG00000003885	-	95	73.077	Seriola_lalandi_dorsalis
ENSCGRG00000018878	-	94	89.333	ENSSLDG00000005119	snrpf	93	90.000	Seriola_lalandi_dorsalis
ENSCGRG00000018878	-	92	93.243	ENSSPUG00000014590	-	93	93.671	Sphenodon_punctatus
ENSCGRG00000018878	-	91	90.411	ENSSPAG00000003283	snrpf	89	91.026	Stegastes_partitus
ENSCGRG00000018878	-	94	92.000	ENSSSCG00000000895	SNRPF	93	92.500	Sus_scrofa
ENSCGRG00000018878	-	72	86.207	ENSTRUG00000014956	snrpf	91	87.302	Takifugu_rubripes
ENSCGRG00000018878	-	94	88.000	ENSTNIG00000012672	snrpf	93	88.750	Tetraodon_nigroviridis
ENSCGRG00000018878	-	94	65.333	ENSTTRG00000006070	SNRPF	93	67.500	Tursiops_truncatus
ENSCGRG00000018878	-	100	81.250	ENSUAMG00000001101	-	94	81.250	Ursus_americanus
ENSCGRG00000018878	-	94	92.000	ENSUAMG00000008176	-	93	92.500	Ursus_americanus
ENSCGRG00000018878	-	94	81.333	ENSUMAG00000006177	-	94	81.250	Ursus_maritimus
ENSCGRG00000018878	-	94	92.000	ENSUMAG00000003528	-	93	92.500	Ursus_maritimus
ENSCGRG00000018878	-	94	92.000	ENSVPAG00000008712	-	93	92.500	Vicugna_pacos
ENSCGRG00000018878	-	97	85.897	ENSVVUG00000023821	-	100	85.897	Vulpes_vulpes
ENSCGRG00000018878	-	91	66.667	ENSXETG00000021630	snrpf	92	68.750	Xenopus_tropicalis
ENSCGRG00000018878	-	92	89.189	ENSXCOG00000013860	snrpf	91	89.873	Xiphophorus_couchianus
ENSCGRG00000018878	-	92	90.541	ENSXMAG00000015448	snrpf	93	91.139	Xiphophorus_maculatus