EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000019294 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 471 bases
Position: chrJH000082.1:35253-35723
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000026238	RRM_1	PF00076.22	2.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000026662	-	471	-	ENSCGRP00000026238	156 (aa)	-	-

Gene Model

Click here to download ENSCGRG00000019294's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000019294's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000019294	-	53	32.955	ENSCGRG00000013689	Cirbp	52	32.955
ENSCGRG00000019294	-	62	88.660	ENSCGRG00000005286	-	74	88.462
ENSCGRG00000019294	-	100	76.923	ENSCGRG00000007542	-	94	67.532
ENSCGRG00000019294	-	62	91.753	ENSCGRG00000015192	Srsf3	95	89.744
ENSCGRG00000019294	-	54	70.930	ENSCGRG00000005929	Srsf7	63	70.930
ENSCGRG00000019294	-	94	68.493	ENSCGRG00000017619	-	91	71.918
ENSCGRG00000019294	-	58	32.632	ENSCGRG00000014636	Rbm3	61	32.632
ENSCGRG00000019294	-	52	85.185	ENSCGRG00000017956	-	94	68.590
ENSCGRG00000019294	-	54	35.556	ENSCGRG00000001522	Rbmx	87	35.556

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000019294	-	62	92.784	ENSAPLG00000013776	SRSF3	95	86.709	Anas_platyrhynchos
ENSCGRG00000019294	-	77	43.333	WBGene00004703	rsp-6	85	43.038	Caenorhabditis_elegans
ENSCGRG00000019294	-	56	69.318	ENSCSAVG00000002676	-	51	68.817	Ciona_savignyi
ENSCGRG00000019294	-	98	100.000	ENSCGRG00001024550	-	94	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000019294	-	100	76.923	ENSCGRG00001006656	-	94	67.532	Cricetulus_griseus_chok1gshd
ENSCGRG00000019294	-	94	78.082	ENSODEG00000003509	-	69	80.769	Octodon_degus
ENSCGRG00000019294	-	62	90.625	ENSPKIG00000001408	-	92	85.897	Paramormyrops_kingsleyae
ENSCGRG00000019294	-	97	63.576	ENSPCIG00000007090	-	91	63.816	Phascolarctos_cinereus