EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001000229 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 2624 bases
Position: chrscaffold_106:334215-336838
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001000265	PAP_RNA-bind	PF04926.15	1.4e-20	1	1
ENSCGRP00001000268	PAP_RNA-bind	PF04926.15	2.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001000292	-	2163	-	ENSCGRP00001000268	720 (aa)	-	-
ENSCGRT00001000289	-	1818	-	ENSCGRP00001000265	605 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001000229's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001000229's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001000229	-	100	91.340	ENSCGRG00001022693	-	100	91.340
ENSCGRG00001000229	-	99	56.283	ENSCGRG00001014951	Papolg	100	56.434
ENSCGRG00001000229	-	99	81.956	ENSCGRG00001002732	-	99	81.956

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001000229	-	99	90.032	ENSG00000090060	PAPOLA	100	87.785	Homo_sapiens
ENSCGRG00001000229	-	99	89.822	ENSAMEG00000014142	PAPOLA	99	87.940	Ailuropoda_melanoleuca
ENSCGRG00001000229	-	99	87.864	ENSAPLG00000006645	PAPOLA	99	83.604	Anas_platyrhynchos
ENSCGRG00001000229	-	99	89.068	ENSACAG00000013474	PAPOLA	99	87.709	Anolis_carolinensis
ENSCGRG00001000229	-	99	90.032	ENSANAG00000018274	PAPOLA	99	90.257	Aotus_nancymaae
ENSCGRG00001000229	-	85	82.584	ENSANAG00000027941	-	98	82.584	Aotus_nancymaae
ENSCGRG00001000229	-	97	73.476	ENSAMXG00000018141	papola	99	78.623	Astyanax_mexicanus
ENSCGRG00001000229	-	99	89.871	ENSBTAG00000004054	PAPOLA	100	88.227	Bos_taurus
ENSCGRG00001000229	-	99	89.871	ENSCJAG00000006512	PAPOLA	99	90.257	Callithrix_jacchus
ENSCGRG00001000229	-	99	88.854	ENSCAFG00000017783	PAPOLA	100	87.651	Canis_familiaris
ENSCGRG00001000229	-	99	89.644	ENSCAFG00020011550	PAPOLA	100	88.092	Canis_lupus_dingo
ENSCGRG00001000229	-	99	89.677	ENSCHIG00000025004	-	100	87.821	Capra_hircus
ENSCGRG00001000229	-	99	89.176	ENSTSYG00000012384	PAPOLA	99	87.364	Carlito_syrichta
ENSCGRG00001000229	-	99	86.885	ENSCPOG00000002648	PAPOLA	100	85.832	Cavia_porcellus
ENSCGRG00001000229	-	99	90.032	ENSCCAG00000025120	PAPOLA	100	87.651	Cebus_capucinus
ENSCGRG00001000229	-	99	90.032	ENSCATG00000018815	PAPOLA	99	90.503	Cercocebus_atys
ENSCGRG00001000229	-	99	89.550	ENSCLAG00000016342	PAPOLA	100	87.957	Chinchilla_lanigera
ENSCGRG00001000229	-	99	90.032	ENSCSAG00000010516	PAPOLA	100	87.785	Chlorocebus_sabaeus
ENSCGRG00001000229	-	72	75.477	ENSCHOG00000001115	PAPOLA	72	75.477	Choloepus_hoffmanni
ENSCGRG00001000229	-	99	88.548	ENSCPBG00000024125	PAPOLA	100	85.405	Chrysemys_picta_bellii
ENSCGRG00001000229	-	99	84.032	ENSCANG00000000159	PAPOLA	100	82.773	Colobus_angolensis_palliatus
ENSCGRG00001000229	-	99	90.244	ENSCGRG00000000257	-	100	87.568	Cricetulus_griseus_crigri
ENSCGRG00001000229	-	100	90.958	ENSCGRG00000003664	-	100	91.304	Cricetulus_griseus_crigri
ENSCGRG00001000229	-	98	78.650	ENSCGRG00000001888	-	96	78.099	Cricetulus_griseus_crigri
ENSCGRG00001000229	-	85	44.062	ENSCSEG00000001841	-	74	50.000	Cynoglossus_semilaevis
ENSCGRG00001000229	-	97	71.111	ENSDARG00000009585	papola	100	64.512	Danio_rerio
ENSCGRG00001000229	-	61	91.081	ENSDORG00000013415	-	99	83.162	Dipodomys_ordii
ENSCGRG00001000229	-	99	76.613	ENSETEG00000004889	PAPOLA	100	76.016	Echinops_telfairi
ENSCGRG00001000229	-	99	70.774	ENSELUG00000018972	papola	100	63.446	Esox_lucius
ENSCGRG00001000229	-	99	90.032	ENSFCAG00000006784	PAPOLA	100	88.633	Felis_catus
ENSCGRG00001000229	-	99	86.872	ENSFALG00000002547	PAPOLA	98	81.053	Ficedula_albicollis
ENSCGRG00001000229	-	99	89.015	ENSFDAG00000010370	PAPOLA	100	86.604	Fukomys_damarensis
ENSCGRG00001000229	-	56	80.403	ENSGMOG00000010209	papola	100	62.113	Gadus_morhua
ENSCGRG00001000229	-	99	87.742	ENSGALG00000033099	PAPOLA	100	82.815	Gallus_gallus
ENSCGRG00001000229	-	76	50.000	ENSGACG00000006142	-	100	49.583	Gasterosteus_aculeatus
ENSCGRG00001000229	-	99	88.387	ENSGAGG00000020500	PAPOLA	99	87.311	Gopherus_agassizii
ENSCGRG00001000229	-	99	90.032	ENSGGOG00000006287	PAPOLA	100	87.785	Gorilla_gorilla
ENSCGRG00001000229	-	99	89.389	ENSHGLG00000007909	-	100	87.415	Heterocephalus_glaber_female
ENSCGRG00001000229	-	100	72.260	ENSHGLG00000007467	-	100	71.448	Heterocephalus_glaber_female
ENSCGRG00001000229	-	99	76.230	ENSHGLG00000017457	-	99	76.093	Heterocephalus_glaber_female
ENSCGRG00001000229	-	99	89.228	ENSHGLG00100017273	PAPOLA	100	87.280	Heterocephalus_glaber_male
ENSCGRG00001000229	-	93	73.862	ENSIPUG00000005919	papola	100	63.452	Ictalurus_punctatus
ENSCGRG00001000229	-	99	89.871	ENSSTOG00000011471	PAPOLA	100	88.227	Ictidomys_tridecemlineatus
ENSCGRG00001000229	-	98	89.251	ENSJJAG00000024340	Papola	100	87.228	Jaculus_jaculus
ENSCGRG00001000229	-	99	75.684	ENSLACG00000018136	PAPOLA	99	70.715	Latimeria_chalumnae
ENSCGRG00001000229	-	96	66.279	ENSLOCG00000008632	papola	99	61.282	Lepisosteus_oculatus
ENSCGRG00001000229	-	99	89.176	ENSLAFG00000000946	PAPOLA	99	87.500	Loxodonta_africana
ENSCGRG00001000229	-	99	90.032	ENSMFAG00000001792	PAPOLA	99	90.388	Macaca_fascicularis
ENSCGRG00001000229	-	99	90.032	ENSMMUG00000018610	PAPOLA	100	87.785	Macaca_mulatta
ENSCGRG00001000229	-	99	90.032	ENSMNEG00000043747	PAPOLA	99	89.338	Macaca_nemestrina
ENSCGRG00001000229	-	99	90.032	ENSMLEG00000032066	PAPOLA	100	87.785	Mandrillus_leucophaeus
ENSCGRG00001000229	-	82	90.419	ENSMGAG00000013228	-	100	83.897	Meleagris_gallopavo
ENSCGRG00001000229	-	100	90.798	ENSMAUG00000017178	Papola	100	90.798	Mesocricetus_auratus
ENSCGRG00001000229	-	99	90.032	ENSMICG00000010347	PAPOLA	100	88.769	Microcebus_murinus
ENSCGRG00001000229	-	100	90.663	ENSMOCG00000021670	Papola	100	90.663	Microtus_ochrogaster
ENSCGRG00001000229	-	99	89.228	ENSMODG00000012887	-	100	87.686	Monodelphis_domestica
ENSCGRG00001000229	-	99	78.365	ENSMODG00000001969	-	99	73.826	Monodelphis_domestica
ENSCGRG00001000229	-	99	90.997	MGP_CAROLIEiJ_G0018093	Papola	100	91.925	Mus_caroli
ENSCGRG00001000229	-	100	90.122	ENSMUSG00000021111	Papola	99	92.547	Mus_musculus
ENSCGRG00001000229	-	100	90.122	MGP_PahariEiJ_G0029850	Papola	100	92.547	Mus_pahari
ENSCGRG00001000229	-	100	90.257	MGP_SPRETEiJ_G0018943	Papola	100	92.857	Mus_spretus
ENSCGRG00001000229	-	99	90.193	ENSMPUG00000003054	PAPOLA	100	88.769	Mustela_putorius_furo
ENSCGRG00001000229	-	99	87.942	ENSMLUG00000010922	PAPOLA	100	86.198	Myotis_lucifugus
ENSCGRG00001000229	-	99	89.711	ENSNGAG00000022172	Papola	100	88.092	Nannospalax_galili
ENSCGRG00001000229	-	99	85.275	ENSNLEG00000000625	PAPOLA	100	82.979	Nomascus_leucogenys
ENSCGRG00001000229	-	64	87.500	ENSMEUG00000007831	-	74	79.528	Notamacropus_eugenii
ENSCGRG00001000229	-	97	86.070	ENSOPRG00000007625	PAPOLA	100	84.882	Ochotona_princeps
ENSCGRG00001000229	-	76	50.515	ENSONIG00000001062	-	98	50.515	Oreochromis_niloticus
ENSCGRG00001000229	-	99	89.355	ENSOANG00000013812	PAPOLA	99	83.446	Ornithorhynchus_anatinus
ENSCGRG00001000229	-	99	86.290	ENSOCUG00000011531	PAPOLA	99	85.482	Oryctolagus_cuniculus
ENSCGRG00001000229	-	99	89.711	ENSOGAG00000004611	PAPOLA	100	88.378	Otolemur_garnettii
ENSCGRG00001000229	-	99	89.871	ENSOARG00000016579	-	100	88.363	Ovis_aries
ENSCGRG00001000229	-	99	90.032	ENSPPAG00000030505	PAPOLA	100	87.785	Pan_paniscus
ENSCGRG00001000229	-	99	90.032	ENSPPRG00000008616	PAPOLA	100	88.633	Panthera_pardus
ENSCGRG00001000229	-	99	89.984	ENSPTIG00000018852	PAPOLA	99	88.587	Panthera_tigris_altaica
ENSCGRG00001000229	-	99	90.032	ENSPTRG00000006704	PAPOLA	100	87.785	Pan_troglodytes
ENSCGRG00001000229	-	99	90.032	ENSPANG00000025582	PAPOLA	98	90.503	Papio_anubis
ENSCGRG00001000229	-	98	71.498	ENSPKIG00000014471	papola	100	64.791	Paramormyrops_kingsleyae
ENSCGRG00001000229	-	99	88.585	ENSPSIG00000014157	PAPOLA	87	85.811	Pelodiscus_sinensis
ENSCGRG00001000229	-	100	90.934	ENSPEMG00000000043	Papola	100	90.934	Peromyscus_maniculatus_bairdii
ENSCGRG00001000229	-	99	89.228	ENSPCIG00000013234	PAPOLA	100	87.773	Phascolarctos_cinereus
ENSCGRG00001000229	-	99	90.820	ENSPPYG00000006128	PAPOLA	100	88.404	Pongo_abelii
ENSCGRG00001000229	-	88	90.353	ENSPCAG00000004199	PAPOLA	100	85.061	Procavia_capensis
ENSCGRG00001000229	-	99	86.290	ENSPCOG00000022117	PAPOLA	99	85.210	Propithecus_coquereli
ENSCGRG00001000229	-	99	89.228	ENSPVAG00000013925	PAPOLA	100	87.009	Pteropus_vampyrus
ENSCGRG00001000229	-	92	75.086	ENSPNAG00000010467	papola	100	64.171	Pygocentrus_nattereri
ENSCGRG00001000229	-	99	90.836	ENSRNOG00000004827	Papola	100	89.716	Rattus_norvegicus
ENSCGRG00001000229	-	99	89.482	ENSRBIG00000038490	PAPOLA	98	89.346	Rhinopithecus_bieti
ENSCGRG00001000229	-	99	90.032	ENSRROG00000025545	PAPOLA	100	87.651	Rhinopithecus_roxellana
ENSCGRG00001000229	-	99	89.822	ENSSBOG00000024061	PAPOLA	100	87.349	Saimiri_boliviensis_boliviensis
ENSCGRG00001000229	-	99	89.176	ENSSHAG00000015211	PAPOLA	99	87.364	Sarcophilus_harrisii
ENSCGRG00001000229	-	93	75.430	ENSSFOG00015004431	papola	98	79.705	Scleropages_formosus
ENSCGRG00001000229	-	79	53.493	ENSSDUG00000018247	-	74	53.493	Seriola_dumerili
ENSCGRG00001000229	-	99	87.801	ENSSPUG00000005835	PAPOLA	100	85.000	Sphenodon_punctatus
ENSCGRG00001000229	-	99	89.871	ENSSSCG00000002505	-	100	88.227	Sus_scrofa
ENSCGRG00001000229	-	99	87.034	ENSTGUG00000012687	PAPOLA	99	83.446	Taeniopygia_guttata
ENSCGRG00001000229	-	69	86.567	ENSTBEG00000000194	PAPOLA	75	79.348	Tupaia_belangeri
ENSCGRG00001000229	-	82	82.752	ENSTTRG00000005717	PAPOLA	80	82.752	Tursiops_truncatus
ENSCGRG00001000229	-	67	89.412	ENSUAMG00000025737	PAPOLA	99	89.412	Ursus_americanus
ENSCGRG00001000229	-	99	89.338	ENSVPAG00000006464	PAPOLA	100	87.772	Vicugna_pacos
ENSCGRG00001000229	-	99	89.711	ENSVVUG00000028340	PAPOLA	100	88.363	Vulpes_vulpes
ENSCGRG00001000229	-	99	82.154	ENSXETG00000013949	papola	100	77.267	Xenopus_tropicalis