EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001000311 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 2464 bases
Position: chrscaffold_262:38131-40594
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001000372	La	PF05383.17	2.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001000396	-	573	-	ENSCGRP00001000372	191 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001000311's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001000311's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001000311	-	100	89.005	ENSCGRG00001011674	-	90	89.005
ENSCGRG00001000311	-	100	95.812	ENSCGRG00001011032	-	85	95.812

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001000311	-	100	81.152	ENSG00000161813	LARP4	100	80.000	Homo_sapiens
ENSCGRG00001000311	-	73	67.626	ENSACIG00000000370	-	70	67.626	Amphilophus_citrinellus
ENSCGRG00001000311	-	87	67.066	ENSACIG00000001198	larp4aa	93	67.066	Amphilophus_citrinellus
ENSCGRG00001000311	-	84	66.250	ENSAPEG00000015441	larp4ab	82	54.190	Amphiprion_percula
ENSCGRG00001000311	-	97	64.516	ENSCCAG00000030343	-	99	64.516	Cebus_capucinus
ENSCGRG00001000311	-	97	69.892	ENSCATG00000039611	-	99	69.892	Cercocebus_atys
ENSCGRG00001000311	-	98	70.745	ENSCANG00000033097	-	74	70.745	Colobus_angolensis_palliatus
ENSCGRG00001000311	-	94	89.444	ENSCGRG00000000087	-	97	89.444	Cricetulus_griseus_crigri
ENSCGRG00001000311	-	81	64.516	ENSCVAG00000001411	-	87	64.516	Cyprinodon_variegatus
ENSCGRG00001000311	-	99	62.245	ENSDARG00000074979	larp4ab	86	69.935	Danio_rerio
ENSCGRG00001000311	-	95	83.978	ENSEASG00005004356	LARP4	50	83.978	Equus_asinus_asinus
ENSCGRG00001000311	-	91	79.885	ENSFDAG00000003796	-	95	79.885	Fukomys_damarensis
ENSCGRG00001000311	-	100	81.675	ENSGGOG00000015230	LARP4	51	81.675	Gorilla_gorilla
ENSCGRG00001000311	-	73	69.065	ENSHBUG00000021929	-	67	69.065	Haplochromis_burtoni
ENSCGRG00001000311	-	100	74.346	ENSHGLG00100000622	-	95	68.966	Heterocephalus_glaber_male
ENSCGRG00001000311	-	100	70.681	ENSJJAG00000014649	-	94	70.330	Jaculus_jaculus
ENSCGRG00001000311	-	97	70.968	ENSMFAG00000001037	-	99	70.968	Macaca_fascicularis
ENSCGRG00001000311	-	97	70.968	ENSMMUG00000045683	-	99	70.968	Macaca_mulatta
ENSCGRG00001000311	-	97	67.742	ENSMNEG00000037799	-	99	67.742	Macaca_nemestrina
ENSCGRG00001000311	-	97	67.742	ENSMLEG00000038232	-	99	67.742	Mandrillus_leucophaeus
ENSCGRG00001000311	-	98	74.866	ENSMICG00000030156	-	86	72.193	Microcebus_murinus
ENSCGRG00001000311	-	94	81.564	ENSMICG00000046883	-	99	81.564	Microcebus_murinus
ENSCGRG00001000311	-	75	76.224	ENSMODG00000004844	-	67	76.224	Monodelphis_domestica
ENSCGRG00001000311	-	77	75.676	ENSMALG00000018631	larp4aa	78	73.973	Monopterus_albus
ENSCGRG00001000311	-	85	62.209	ENSMALG00000015637	-	74	62.209	Monopterus_albus
ENSCGRG00001000311	-	100	81.675	MGP_CAROLIEiJ_G0020281	Larp4	50	81.675	Mus_caroli
ENSCGRG00001000311	-	77	68.919	ENSNBRG00000015675	larp4ab	87	58.282	Neolamprologus_brichardi
ENSCGRG00001000311	-	72	67.153	ENSORLG00000018835	-	65	67.153	Oryzias_latipes
ENSCGRG00001000311	-	72	67.153	ENSORLG00020009602	-	65	67.153	Oryzias_latipes_hni
ENSCGRG00001000311	-	73	65.468	ENSORLG00015005865	-	67	65.468	Oryzias_latipes_hsok
ENSCGRG00001000311	-	81	63.636	ENSOMEG00000008561	-	79	63.636	Oryzias_melastigma
ENSCGRG00001000311	-	87	69.880	ENSOMEG00000019749	larp4aa	78	73.154	Oryzias_melastigma
ENSCGRG00001000311	-	100	69.110	ENSPTRG00000045907	-	51	69.110	Pan_troglodytes
ENSCGRG00001000311	-	80	71.242	ENSPMGG00000023289	-	96	71.242	Periophthalmus_magnuspinnatus
ENSCGRG00001000311	-	80	62.745	ENSPMAG00000001038	-	61	62.745	Petromyzon_marinus
ENSCGRG00001000311	-	85	66.667	ENSPREG00000016263	larp4ab	75	67.296	Poecilia_reticulata
ENSCGRG00001000311	-	75	76.389	ENSPPYG00000006330	-	66	76.389	Pongo_abelii
ENSCGRG00001000311	-	89	59.412	ENSPNYG00000000915	-	69	59.412	Pundamilia_nyererei
ENSCGRG00001000311	-	75	72.028	ENSRNOG00000057943	AABR07058884.2	67	72.028	Rattus_norvegicus
ENSCGRG00001000311	-	91	67.241	ENSSBOG00000035851	-	95	67.241	Saimiri_boliviensis_boliviensis
ENSCGRG00001000311	-	80	73.856	ENSSPAG00000007222	larp4aa	76	74.150	Stegastes_partitus
ENSCGRG00001000311	-	85	66.082	ENSXCOG00000019635	larp4ab	75	66.460	Xiphophorus_couchianus