EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001000428 (Gene tree)
Gene ID: -
Gene Symbol: Rab5b
Alias: C030027M18Rik
Full Name: RAB5B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 7144 bases
Position: chrscaffold_7:65818780-65825923
Accession: 100768837
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001000531	MMR_HSR1	PF01926.23	0.00014	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001000555	-	648	-	ENSCGRP00001000531	215 (aa)	XP_003506243	G3HRK4

Gene Model

Click here to download ENSCGRG00001000428's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001000428's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001000428	Rab5b	97	86.603	ENSCGRG00001014226	Rab5c	97	86.603
ENSCGRG00001000428	Rab5b	82	33.333	ENSCGRG00001021366	Rheb	93	33.333
ENSCGRG00001000428	Rab5b	90	38.974	ENSCGRG00001023636	Rab35	96	38.974
ENSCGRG00001000428	Rab5b	90	38.974	ENSCGRG00001017519	Rab18	93	38.974
ENSCGRG00001000428	Rab5b	78	35.882	ENSCGRG00001022502	Rab39b	80	35.882
ENSCGRG00001000428	Rab5b	77	45.181	ENSCGRG00001018153	Rab6a	80	45.181
ENSCGRG00001000428	Rab5b	82	45.198	ENSCGRG00001014956	Rab1b	87	45.198
ENSCGRG00001000428	Rab5b	81	37.143	ENSCGRG00001006853	Rab15	83	37.143
ENSCGRG00001000428	Rab5b	77	45.783	ENSCGRG00001013041	Rab6b	80	45.783
ENSCGRG00001000428	Rab5b	74	37.195	ENSCGRG00001021894	Rabl2	72	37.195
ENSCGRG00001000428	Rab5b	91	43.204	ENSCGRG00001013827	Rab11b	94	43.204
ENSCGRG00001000428	Rab5b	75	32.515	ENSCGRG00001020093	Nras	85	32.515
ENSCGRG00001000428	Rab5b	75	38.554	ENSCGRG00001001211	Rab33a	70	38.554
ENSCGRG00001000428	Rab5b	75	43.478	ENSCGRG00001020076	Rab2a	76	43.478
ENSCGRG00001000428	Rab5b	82	39.344	ENSCGRG00001016897	Rab33b	79	39.130
ENSCGRG00001000428	Rab5b	100	81.860	ENSCGRG00001020018	-	100	81.860
ENSCGRG00001000428	Rab5b	80	33.146	ENSCGRG00001018735	Hras	94	32.778
ENSCGRG00001000428	Rab5b	89	36.979	ENSCGRG00001021505	Rab13	95	36.979
ENSCGRG00001000428	Rab5b	80	32.749	ENSCGRG00001009212	-	76	32.749
ENSCGRG00001000428	Rab5b	85	35.326	ENSCGRG00001006958	Rab12	63	35.326
ENSCGRG00001000428	Rab5b	72	36.250	ENSCGRG00001019426	Rab42	74	36.250
ENSCGRG00001000428	Rab5b	91	41.546	ENSCGRG00001017341	Rab25	94	41.546
ENSCGRG00001000428	Rab5b	62	30.986	ENSCGRG00001020777	Arl8a	73	30.986
ENSCGRG00001000428	Rab5b	90	40.201	ENSCGRG00001020833	-	97	40.201
ENSCGRG00001000428	Rab5b	90	43.367	ENSCGRG00001012691	-	95	43.367
ENSCGRG00001000428	Rab5b	78	42.857	ENSCGRG00001021787	Rab30	83	42.857
ENSCGRG00001000428	Rab5b	90	47.938	ENSCGRG00001020667	Rab22a	98	47.938
ENSCGRG00001000428	Rab5b	75	44.720	ENSCGRG00001006440	Rab14	75	44.720
ENSCGRG00001000428	Rab5b	75	30.675	ENSCGRG00001013183	-	85	30.675
ENSCGRG00001000428	Rab5b	73	33.750	ENSCGRG00001015715	Rab36	60	33.750
ENSCGRG00001000428	Rab5b	90	35.323	ENSCGRG00001001220	Rab9b	97	35.323
ENSCGRG00001000428	Rab5b	62	30.986	ENSCGRG00001018115	Arl8b	73	30.986
ENSCGRG00001000428	Rab5b	78	42.442	ENSCGRG00001021807	Rab7	83	42.442
ENSCGRG00001000428	Rab5b	74	38.125	ENSCGRG00001008994	Rab23	67	38.125
ENSCGRG00001000428	Rab5b	91	41.667	ENSCGRG00001023313	Rab11a	94	41.667
ENSCGRG00001000428	Rab5b	93	36.765	ENSCGRG00001010235	Rab9	99	36.765
ENSCGRG00001000428	Rab5b	76	32.727	ENSCGRG00001006529	-	90	31.579

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001000428	Rab5b	100	99.535	ENSG00000111540	RAB5B	100	100.000	Homo_sapiens
ENSCGRG00001000428	Rab5b	100	98.157	ENSAMEG00000003196	RAB5B	100	98.157	Ailuropoda_melanoleuca
ENSCGRG00001000428	Rab5b	100	96.744	ENSACAG00000005380	RAB5B	100	96.744	Anolis_carolinensis
ENSCGRG00001000428	Rab5b	100	99.535	ENSANAG00000033215	RAB5B	95	99.535	Aotus_nancymaae
ENSCGRG00001000428	Rab5b	100	99.535	ENSBTAG00000014129	RAB5B	100	99.535	Bos_taurus
ENSCGRG00001000428	Rab5b	100	99.535	ENSCJAG00000041780	RAB5B	95	99.535	Callithrix_jacchus
ENSCGRG00001000428	Rab5b	100	99.535	ENSCAFG00000000087	RAB5B	100	99.535	Canis_familiaris
ENSCGRG00001000428	Rab5b	100	99.535	ENSCAFG00020026094	RAB5B	100	99.535	Canis_lupus_dingo
ENSCGRG00001000428	Rab5b	97	99.519	ENSCHIG00000010333	RAB5B	96	99.519	Capra_hircus
ENSCGRG00001000428	Rab5b	100	99.070	ENSTSYG00000009576	RAB5B	100	99.070	Carlito_syrichta
ENSCGRG00001000428	Rab5b	100	99.535	ENSCPOG00000034818	RAB5B	100	99.535	Cavia_porcellus
ENSCGRG00001000428	Rab5b	100	98.605	ENSCCAG00000019480	RAB5B	100	98.605	Cebus_capucinus
ENSCGRG00001000428	Rab5b	83	99.441	ENSCATG00000034978	RAB5B	98	99.441	Cercocebus_atys
ENSCGRG00001000428	Rab5b	100	98.605	ENSCSAG00000005277	RAB5B	100	98.605	Chlorocebus_sabaeus
ENSCGRG00001000428	Rab5b	100	96.744	ENSCPBG00000012712	RAB5B	100	96.744	Chrysemys_picta_bellii
ENSCGRG00001000428	Rab5b	100	100.000	ENSCGRG00000009508	-	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001000428	Rab5b	100	99.535	ENSDORG00000025063	Rab5b	100	99.535	Dipodomys_ordii
ENSCGRG00001000428	Rab5b	100	99.070	ENSECAG00000023306	RAB5B	100	99.070	Equus_caballus
ENSCGRG00001000428	Rab5b	100	98.605	ENSEEUG00000006745	RAB5B	100	98.605	Erinaceus_europaeus
ENSCGRG00001000428	Rab5b	100	99.535	ENSFDAG00000008326	RAB5B	100	99.535	Fukomys_damarensis
ENSCGRG00001000428	Rab5b	100	98.605	ENSHGLG00000005995	RAB5B	100	98.605	Heterocephalus_glaber_female
ENSCGRG00001000428	Rab5b	100	98.605	ENSHGLG00100012955	RAB5B	100	98.605	Heterocephalus_glaber_male
ENSCGRG00001000428	Rab5b	100	98.140	ENSSTOG00000010536	RAB5B	100	98.140	Ictidomys_tridecemlineatus
ENSCGRG00001000428	Rab5b	100	99.070	ENSJJAG00000019506	Rab5b	100	99.070	Jaculus_jaculus
ENSCGRG00001000428	Rab5b	100	98.618	ENSLAFG00000018009	RAB5B	95	98.618	Loxodonta_africana
ENSCGRG00001000428	Rab5b	100	98.605	ENSMFAG00000029992	RAB5B	100	98.605	Macaca_fascicularis
ENSCGRG00001000428	Rab5b	100	98.605	ENSMMUG00000031853	RAB5B	100	98.605	Macaca_mulatta
ENSCGRG00001000428	Rab5b	100	98.605	ENSMNEG00000005338	RAB5B	100	98.605	Macaca_nemestrina
ENSCGRG00001000428	Rab5b	100	98.605	ENSMLEG00000034462	RAB5B	100	98.605	Mandrillus_leucophaeus
ENSCGRG00001000428	Rab5b	100	99.535	ENSMAUG00000011613	Rab5b	100	99.535	Mesocricetus_auratus
ENSCGRG00001000428	Rab5b	100	99.070	ENSMICG00000011086	RAB5B	100	99.070	Microcebus_murinus
ENSCGRG00001000428	Rab5b	100	99.535	ENSMUSG00000000711	Rab5b	100	99.535	Mus_musculus
ENSCGRG00001000428	Rab5b	100	99.535	MGP_PahariEiJ_G0031135	Rab5b	100	99.535	Mus_pahari
ENSCGRG00001000428	Rab5b	100	99.070	MGP_SPRETEiJ_G0016774	Rab5b	100	99.070	Mus_spretus
ENSCGRG00001000428	Rab5b	99	98.148	ENSMPUG00000000946	RAB5B	89	98.148	Mustela_putorius_furo
ENSCGRG00001000428	Rab5b	100	99.535	ENSNLEG00000017570	-	100	99.535	Nomascus_leucogenys
ENSCGRG00001000428	Rab5b	100	99.535	ENSOPRG00000007883	RAB5B	100	99.535	Ochotona_princeps
ENSCGRG00001000428	Rab5b	100	99.070	ENSODEG00000003860	RAB5B	100	99.070	Octodon_degus
ENSCGRG00001000428	Rab5b	100	99.535	ENSOCUG00000013895	RAB5B	95	99.535	Oryctolagus_cuniculus
ENSCGRG00001000428	Rab5b	100	99.535	ENSOARG00000010651	RAB5B	95	99.535	Ovis_aries
ENSCGRG00001000428	Rab5b	100	99.535	ENSPPAG00000035431	RAB5B	100	99.535	Pan_paniscus
ENSCGRG00001000428	Rab5b	100	99.535	ENSPTRG00000005071	RAB5B	97	99.043	Pan_troglodytes
ENSCGRG00001000428	Rab5b	99	97.664	ENSPANG00000021075	RAB5B	97	97.664	Papio_anubis
ENSCGRG00001000428	Rab5b	100	99.535	ENSPCOG00000016461	RAB5B	100	99.535	Propithecus_coquereli
ENSCGRG00001000428	Rab5b	100	98.605	ENSRNOG00000006130	Rab5b	100	98.605	Rattus_norvegicus
ENSCGRG00001000428	Rab5b	100	98.605	ENSRBIG00000013165	RAB5B	100	98.605	Rhinopithecus_bieti
ENSCGRG00001000428	Rab5b	100	98.605	ENSRROG00000037973	RAB5B	100	98.605	Rhinopithecus_roxellana
ENSCGRG00001000428	Rab5b	100	83.256	ENSSBOG00000035419	RAB5B	100	83.256	Saimiri_boliviensis_boliviensis
ENSCGRG00001000428	Rab5b	100	98.140	ENSSHAG00000007727	RAB5B	100	98.140	Sarcophilus_harrisii
ENSCGRG00001000428	Rab5b	100	99.535	ENSSARG00000006237	RAB5B	100	99.535	Sorex_araneus
ENSCGRG00001000428	Rab5b	100	96.744	ENSSPUG00000014873	RAB5B	100	96.744	Sphenodon_punctatus
ENSCGRG00001000428	Rab5b	100	99.535	ENSTTRG00000015001	RAB5B	100	99.535	Tursiops_truncatus
ENSCGRG00001000428	Rab5b	100	99.070	ENSUAMG00000014651	RAB5B	100	99.070	Ursus_americanus
ENSCGRG00001000428	Rab5b	100	99.070	ENSUMAG00000016263	RAB5B	100	99.070	Ursus_maritimus
ENSCGRG00001000428	Rab5b	68	100.000	ENSVVUG00000022054	RAB5B	81	100.000	Vulpes_vulpes