EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00001000513 (Gene tree)
Gene ID: -
Gene Symbol: Srbd1
Alias: D530025C17Rik
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 166406 bases
Position: chrscaffold_1:87107636-87274041
Accession: 100762977
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001000656	S1	PF00575.23	8.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001000680	-	3565	XM_016978413	ENSCGRP00001000656	983 (aa)	XP_016833902	G3GV59

Gene Model

Click here to download ENSCGRG00001000513's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001000513's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001000513	Srbd1	100	84.469	ENSG00000068784	SRBD1	100	84.469	Homo_sapiens
ENSCGRG00001000513	Srbd1	100	50.739	ENSAPOG00000005103	si:ch211-117n7.8	99	51.034	Acanthochromis_polyacanthus
ENSCGRG00001000513	Srbd1	100	85.829	ENSAMEG00000005993	SRBD1	100	85.829	Ailuropoda_melanoleuca
ENSCGRG00001000513	Srbd1	83	57.074	ENSACIG00000009875	si:ch211-117n7.8	85	57.177	Amphilophus_citrinellus
ENSCGRG00001000513	Srbd1	98	52.113	ENSAOCG00000024718	si:ch211-117n7.8	98	52.314	Amphiprion_ocellaris
ENSCGRG00001000513	Srbd1	84	57.720	ENSAPEG00000002645	si:ch211-117n7.8	87	57.720	Amphiprion_percula
ENSCGRG00001000513	Srbd1	84	58.145	ENSATEG00000010844	si:ch211-117n7.8	84	58.145	Anabas_testudineus
ENSCGRG00001000513	Srbd1	100	71.142	ENSAPLG00000006313	SRBD1	100	71.572	Anas_platyrhynchos
ENSCGRG00001000513	Srbd1	100	84.068	ENSANAG00000025573	SRBD1	100	84.068	Aotus_nancymaae
ENSCGRG00001000513	Srbd1	85	56.824	ENSACLG00000024219	si:ch211-117n7.8	83	56.824	Astatotilapia_calliptera
ENSCGRG00001000513	Srbd1	86	60.517	ENSAMXG00000004294	SRBD1	93	56.794	Astyanax_mexicanus
ENSCGRG00001000513	Srbd1	100	84.168	ENSBTAG00000007508	SRBD1	97	84.269	Bos_taurus
ENSCGRG00001000513	Srbd1	100	83.567	ENSCJAG00000000727	SRBD1	100	83.567	Callithrix_jacchus
ENSCGRG00001000513	Srbd1	100	85.356	ENSCAFG00000002554	SRBD1	100	85.356	Canis_familiaris
ENSCGRG00001000513	Srbd1	100	82.430	ENSCAFG00020026284	SRBD1	99	88.772	Canis_lupus_dingo
ENSCGRG00001000513	Srbd1	100	84.469	ENSCHIG00000016535	SRBD1	98	84.569	Capra_hircus
ENSCGRG00001000513	Srbd1	100	85.772	ENSTSYG00000012797	SRBD1	100	85.772	Carlito_syrichta
ENSCGRG00001000513	Srbd1	100	85.410	ENSCPOG00000004773	SRBD1	100	85.410	Cavia_porcellus
ENSCGRG00001000513	Srbd1	100	84.469	ENSCCAG00000025589	SRBD1	100	84.469	Cebus_capucinus
ENSCGRG00001000513	Srbd1	100	85.070	ENSCATG00000039530	SRBD1	100	85.070	Cercocebus_atys
ENSCGRG00001000513	Srbd1	100	85.729	ENSCLAG00000008623	SRBD1	100	85.729	Chinchilla_lanigera
ENSCGRG00001000513	Srbd1	100	85.170	ENSCSAG00000013350	SRBD1	100	85.170	Chlorocebus_sabaeus
ENSCGRG00001000513	Srbd1	87	94.118	ENSCHOG00000003805	SRBD1	87	94.118	Choloepus_hoffmanni
ENSCGRG00001000513	Srbd1	100	72.060	ENSCPBG00000005677	SRBD1	100	73.220	Chrysemys_picta_bellii
ENSCGRG00001000513	Srbd1	79	42.911	ENSCING00000005950	-	99	42.911	Ciona_intestinalis
ENSCGRG00001000513	Srbd1	79	43.567	ENSCSAVG00000000861	-	99	43.567	Ciona_savignyi
ENSCGRG00001000513	Srbd1	99	84.538	ENSCANG00000016307	SRBD1	99	84.538	Colobus_angolensis_palliatus
ENSCGRG00001000513	Srbd1	100	100.000	ENSCGRG00000002283	Srbd1	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001000513	Srbd1	85	55.386	ENSCSEG00000000856	si:ch211-117n7.8	85	55.504	Cynoglossus_semilaevis
ENSCGRG00001000513	Srbd1	85	56.975	ENSCVAG00000020212	si:ch211-117n7.8	90	56.975	Cyprinodon_variegatus
ENSCGRG00001000513	Srbd1	100	84.585	ENSDNOG00000018686	SRBD1	100	84.585	Dasypus_novemcinctus
ENSCGRG00001000513	Srbd1	100	84.467	ENSDORG00000010468	Srbd1	100	84.467	Dipodomys_ordii
ENSCGRG00001000513	Srbd1	79	37.547	FBgn0051156	CG31156	79	37.922	Drosophila_melanogaster
ENSCGRG00001000513	Srbd1	89	79.422	ENSETEG00000000739	SRBD1	92	80.325	Echinops_telfairi
ENSCGRG00001000513	Srbd1	73	48.153	ENSEBUG00000008902	si:ch211-117n7.8	96	48.153	Eptatretus_burgeri
ENSCGRG00001000513	Srbd1	100	83.567	ENSEASG00005003132	SRBD1	97	91.083	Equus_asinus_asinus
ENSCGRG00001000513	Srbd1	100	86.774	ENSECAG00000013865	SRBD1	98	86.747	Equus_caballus
ENSCGRG00001000513	Srbd1	86	59.064	ENSELUG00000012592	si:ch211-117n7.8	82	59.064	Esox_lucius
ENSCGRG00001000513	Srbd1	100	86.044	ENSFCAG00000005101	SRBD1	100	86.044	Felis_catus
ENSCGRG00001000513	Srbd1	100	69.574	ENSFALG00000012966	SRBD1	100	69.675	Ficedula_albicollis
ENSCGRG00001000513	Srbd1	98	85.774	ENSFDAG00000016670	SRBD1	99	85.774	Fukomys_damarensis
ENSCGRG00001000513	Srbd1	85	58.186	ENSFHEG00000019480	si:ch211-117n7.8	83	58.186	Fundulus_heteroclitus
ENSCGRG00001000513	Srbd1	50	53.670	ENSGMOG00000018010	-	100	53.670	Gadus_morhua
ENSCGRG00001000513	Srbd1	100	69.718	ENSGALG00000009990	SRBD1	100	70.482	Gallus_gallus
ENSCGRG00001000513	Srbd1	85	56.890	ENSGAFG00000019664	si:ch211-117n7.8	99	51.093	Gambusia_affinis
ENSCGRG00001000513	Srbd1	62	60.160	ENSGACG00000010794	si:ch211-117n7.8	100	60.160	Gasterosteus_aculeatus
ENSCGRG00001000513	Srbd1	84	80.912	ENSGAGG00000006166	SRBD1	99	80.912	Gopherus_agassizii
ENSCGRG00001000513	Srbd1	97	84.877	ENSGGOG00000005910	SRBD1	100	84.861	Gorilla_gorilla
ENSCGRG00001000513	Srbd1	85	50.721	ENSHBUG00000013207	si:ch211-117n7.8	86	50.721	Haplochromis_burtoni
ENSCGRG00001000513	Srbd1	99	86.294	ENSHGLG00000018153	-	99	86.294	Heterocephalus_glaber_female
ENSCGRG00001000513	Srbd1	99	86.091	ENSHGLG00100015183	-	99	86.091	Heterocephalus_glaber_male
ENSCGRG00001000513	Srbd1	85	61.045	ENSIPUG00000009661	srbd1	85	61.045	Ictalurus_punctatus
ENSCGRG00001000513	Srbd1	100	87.538	ENSSTOG00000005898	SRBD1	100	87.538	Ictidomys_tridecemlineatus
ENSCGRG00001000513	Srbd1	100	81.054	ENSJJAG00000022244	Srbd1	100	81.054	Jaculus_jaculus
ENSCGRG00001000513	Srbd1	84	57.295	ENSKMAG00000003473	si:ch211-117n7.8	83	57.295	Kryptolebias_marmoratus
ENSCGRG00001000513	Srbd1	99	51.420	ENSLBEG00000027518	si:ch211-117n7.8	99	51.420	Labrus_bergylta
ENSCGRG00001000513	Srbd1	85	70.178	ENSLACG00000009790	SRBD1	99	70.178	Latimeria_chalumnae
ENSCGRG00001000513	Srbd1	96	58.613	ENSLOCG00000016360	si:ch211-117n7.8	99	56.873	Lepisosteus_oculatus
ENSCGRG00001000513	Srbd1	100	85.070	ENSMFAG00000042026	SRBD1	100	85.070	Macaca_fascicularis
ENSCGRG00001000513	Srbd1	100	84.870	ENSMMUG00000003490	SRBD1	100	84.870	Macaca_mulatta
ENSCGRG00001000513	Srbd1	100	82.465	ENSMNEG00000034701	SRBD1	100	82.465	Macaca_nemestrina
ENSCGRG00001000513	Srbd1	100	84.870	ENSMLEG00000000745	SRBD1	100	84.870	Mandrillus_leucophaeus
ENSCGRG00001000513	Srbd1	82	55.879	ENSMAMG00000021921	si:ch211-117n7.8	99	50.499	Mastacembelus_armatus
ENSCGRG00001000513	Srbd1	85	56.824	ENSMZEG00005027369	si:ch211-117n7.8	83	56.824	Maylandia_zebra
ENSCGRG00001000513	Srbd1	80	75.281	ENSMGAG00000010273	SRBD1	100	75.281	Meleagris_gallopavo
ENSCGRG00001000513	Srbd1	81	90.670	ENSMAUG00000013916	Srbd1	99	90.670	Mesocricetus_auratus
ENSCGRG00001000513	Srbd1	100	85.729	ENSMICG00000007835	SRBD1	100	85.757	Microcebus_murinus
ENSCGRG00001000513	Srbd1	100	92.886	ENSMOCG00000018716	Srbd1	100	92.886	Microtus_ochrogaster
ENSCGRG00001000513	Srbd1	84	55.991	ENSMMOG00000007507	si:ch211-117n7.8	87	55.991	Mola_mola
ENSCGRG00001000513	Srbd1	99	50.586	ENSMALG00000001562	si:ch211-117n7.8	99	50.637	Monopterus_albus
ENSCGRG00001000513	Srbd1	100	88.403	MGP_CAROLIEiJ_G0021934	Srbd1	99	90.789	Mus_caroli
ENSCGRG00001000513	Srbd1	100	88.403	ENSMUSG00000024135	Srbd1	100	88.403	Mus_musculus
ENSCGRG00001000513	Srbd1	100	87.691	MGP_PahariEiJ_G0020924	Srbd1	100	87.691	Mus_pahari
ENSCGRG00001000513	Srbd1	100	89.013	MGP_SPRETEiJ_G0022850	Srbd1	100	89.013	Mus_spretus
ENSCGRG00001000513	Srbd1	100	82.229	ENSMLUG00000007039	SRBD1	100	82.229	Myotis_lucifugus
ENSCGRG00001000513	Srbd1	100	86.673	ENSNGAG00000011893	Srbd1	100	86.673	Nannospalax_galili
ENSCGRG00001000513	Srbd1	84	56.543	ENSNBRG00000012873	si:ch211-117n7.8	85	56.543	Neolamprologus_brichardi
ENSCGRG00001000513	Srbd1	100	84.569	ENSNLEG00000016877	SRBD1	100	84.569	Nomascus_leucogenys
ENSCGRG00001000513	Srbd1	100	82.944	ENSODEG00000012095	SRBD1	100	82.944	Octodon_degus
ENSCGRG00001000513	Srbd1	84	57.863	ENSONIG00000000945	si:ch211-117n7.8	100	57.863	Oreochromis_niloticus
ENSCGRG00001000513	Srbd1	100	86.996	ENSOCUG00000015385	SRBD1	100	86.996	Oryctolagus_cuniculus
ENSCGRG00001000513	Srbd1	85	54.007	ENSORLG00000004427	si:ch211-117n7.8	83	54.007	Oryzias_latipes
ENSCGRG00001000513	Srbd1	85	56.628	ENSORLG00020012792	si:ch211-117n7.8	84	56.845	Oryzias_latipes_hni
ENSCGRG00001000513	Srbd1	85	56.961	ENSORLG00015018598	si:ch211-117n7.8	84	56.961	Oryzias_latipes_hsok
ENSCGRG00001000513	Srbd1	96	52.033	ENSOMEG00000012229	si:ch211-117n7.8	93	52.450	Oryzias_melastigma
ENSCGRG00001000513	Srbd1	100	80.441	ENSOGAG00000001076	SRBD1	100	80.441	Otolemur_garnettii
ENSCGRG00001000513	Srbd1	100	79.864	ENSOARG00000005958	SRBD1	100	80.445	Ovis_aries
ENSCGRG00001000513	Srbd1	100	84.770	ENSPPAG00000038442	SRBD1	100	84.770	Pan_paniscus
ENSCGRG00001000513	Srbd1	100	85.944	ENSPPRG00000003449	SRBD1	100	85.944	Panthera_pardus
ENSCGRG00001000513	Srbd1	100	86.044	ENSPTIG00000012495	SRBD1	100	86.044	Panthera_tigris_altaica
ENSCGRG00001000513	Srbd1	100	84.770	ENSPTRG00000011889	SRBD1	100	84.770	Pan_troglodytes
ENSCGRG00001000513	Srbd1	100	84.770	ENSPANG00000008063	SRBD1	100	84.770	Papio_anubis
ENSCGRG00001000513	Srbd1	95	55.450	ENSPKIG00000021973	si:ch211-117n7.8	98	54.433	Paramormyrops_kingsleyae
ENSCGRG00001000513	Srbd1	100	73.065	ENSPSIG00000008992	SRBD1	100	73.340	Pelodiscus_sinensis
ENSCGRG00001000513	Srbd1	84	55.423	ENSPMGG00000013348	si:ch211-117n7.8	99	51.277	Periophthalmus_magnuspinnatus
ENSCGRG00001000513	Srbd1	100	91.054	ENSPEMG00000020684	Srbd1	100	91.054	Peromyscus_maniculatus_bairdii
ENSCGRG00001000513	Srbd1	99	51.282	ENSPFOG00000010650	si:ch211-117n7.8	99	51.282	Poecilia_formosa
ENSCGRG00001000513	Srbd1	99	51.479	ENSPLAG00000002141	si:ch211-117n7.8	99	51.479	Poecilia_latipinna
ENSCGRG00001000513	Srbd1	99	51.381	ENSPMEG00000018537	si:ch211-117n7.8	99	51.381	Poecilia_mexicana
ENSCGRG00001000513	Srbd1	97	51.935	ENSPREG00000003258	si:ch211-117n7.8	98	51.935	Poecilia_reticulata
ENSCGRG00001000513	Srbd1	100	77.694	ENSPPYG00000012444	SRBD1	99	77.694	Pongo_abelii
ENSCGRG00001000513	Srbd1	82	81.016	ENSPCAG00000005629	SRBD1	86	81.016	Procavia_capensis
ENSCGRG00001000513	Srbd1	100	72.673	ENSPCOG00000017669	SRBD1	100	72.673	Propithecus_coquereli
ENSCGRG00001000513	Srbd1	100	74.900	ENSPVAG00000001782	SRBD1	100	74.900	Pteropus_vampyrus
ENSCGRG00001000513	Srbd1	85	54.231	ENSPNYG00000000508	si:ch211-117n7.8	86	54.231	Pundamilia_nyererei
ENSCGRG00001000513	Srbd1	85	61.520	ENSPNAG00000013492	SRBD1	85	61.639	Pygocentrus_nattereri
ENSCGRG00001000513	Srbd1	100	88.098	ENSRNOG00000014720	Srbd1	99	88.098	Rattus_norvegicus
ENSCGRG00001000513	Srbd1	99	84.438	ENSRBIG00000033486	SRBD1	99	84.438	Rhinopithecus_bieti
ENSCGRG00001000513	Srbd1	99	84.438	ENSRROG00000041599	SRBD1	99	84.438	Rhinopithecus_roxellana
ENSCGRG00001000513	Srbd1	100	83.868	ENSSBOG00000024982	SRBD1	100	83.868	Saimiri_boliviensis_boliviensis
ENSCGRG00001000513	Srbd1	84	59.498	ENSSFOG00015001128	si:ch211-117n7.8	90	59.498	Scleropages_formosus
ENSCGRG00001000513	Srbd1	84	57.007	ENSSMAG00000018256	si:ch211-117n7.8	82	57.363	Scophthalmus_maximus
ENSCGRG00001000513	Srbd1	84	56.651	ENSSLDG00000023189	si:ch211-117n7.8	83	56.651	Seriola_lalandi_dorsalis
ENSCGRG00001000513	Srbd1	100	76.518	ENSSARG00000009740	SRBD1	100	76.518	Sorex_araneus
ENSCGRG00001000513	Srbd1	85	78.136	ENSSPUG00000010475	SRBD1	100	71.323	Sphenodon_punctatus
ENSCGRG00001000513	Srbd1	84	55.344	ENSSPAG00000008092	-	84	55.635	Stegastes_partitus
ENSCGRG00001000513	Srbd1	100	85.643	ENSSSCG00000008445	SRBD1	98	85.743	Sus_scrofa
ENSCGRG00001000513	Srbd1	84	77.858	ENSTGUG00000003878	SRBD1	100	77.858	Taeniopygia_guttata
ENSCGRG00001000513	Srbd1	99	50.484	ENSTRUG00000007080	si:ch211-117n7.8	93	57.464	Takifugu_rubripes
ENSCGRG00001000513	Srbd1	99	49.657	ENSTNIG00000007464	si:ch211-117n7.8	99	49.657	Tetraodon_nigroviridis
ENSCGRG00001000513	Srbd1	82	97.872	ENSTBEG00000004556	SRBD1	82	97.872	Tupaia_belangeri
ENSCGRG00001000513	Srbd1	94	85.376	ENSTTRG00000011871	SRBD1	94	86.212	Tursiops_truncatus
ENSCGRG00001000513	Srbd1	100	85.772	ENSUAMG00000008126	SRBD1	100	84.252	Ursus_americanus
ENSCGRG00001000513	Srbd1	100	85.872	ENSUMAG00000012902	SRBD1	98	85.872	Ursus_maritimus
ENSCGRG00001000513	Srbd1	91	87.265	ENSVPAG00000006825	SRBD1	99	87.265	Vicugna_pacos
ENSCGRG00001000513	Srbd1	100	85.141	ENSVVUG00000005389	SRBD1	100	85.643	Vulpes_vulpes
ENSCGRG00001000513	Srbd1	100	51.538	ENSXETG00000002760	srbd1	100	52.069	Xenopus_tropicalis
ENSCGRG00001000513	Srbd1	99	51.032	ENSXMAG00000016861	si:ch211-117n7.8	99	51.032	Xiphophorus_maculatus