EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001000623 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 7944 bases
Position: chrscaffold_13:33667108-33675051
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001000805	RRM_1	PF00076.22	2.2e-37	1	3
ENSCGRP00001000805	RRM_1	PF00076.22	2.2e-37	2	3
ENSCGRP00001000805	RRM_1	PF00076.22	2.2e-37	3	3
ENSCGRP00001000801	RRM_1	PF00076.22	3.6e-37	1	3
ENSCGRP00001000801	RRM_1	PF00076.22	3.6e-37	2	3
ENSCGRP00001000801	RRM_1	PF00076.22	3.6e-37	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001000825	-	1779	-	ENSCGRP00001000801	592 (aa)	-	-
ENSCGRT00001000829	-	1572	-	ENSCGRP00001000805	523 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001000623's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001000623's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001000623	-	59	53.871	ENSCGRG00001014564	Syncrip	75	54.867
ENSCGRG00001000623	-	59	55.806	ENSCGRG00001012007	Hnrnpr	71	45.495
ENSCGRG00001000623	-	61	71.609	ENSCGRG00001016714	Rbm46	67	71.609
ENSCGRG00001000623	-	100	94.476	ENSCGRG00001020102	-	100	94.476
ENSCGRG00001000623	-	66	67.049	ENSCGRG00001017413	A1cf	76	55.858

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001000623	-	100	92.785	ENSG00000163694	RBM47	100	95.392	Homo_sapiens
ENSCGRG00001000623	-	100	83.511	ENSAPOG00000011062	rbm47	100	82.447	Acanthochromis_polyacanthus
ENSCGRG00001000623	-	100	92.437	ENSAMEG00000009672	RBM47	100	92.941	Ailuropoda_melanoleuca
ENSCGRG00001000623	-	100	84.043	ENSACIG00000011531	rbm47	100	82.979	Amphilophus_citrinellus
ENSCGRG00001000623	-	100	80.867	ENSAOCG00000022245	rbm47	100	82.447	Amphiprion_ocellaris
ENSCGRG00001000623	-	100	80.867	ENSAPEG00000018304	rbm47	100	82.447	Amphiprion_percula
ENSCGRG00001000623	-	100	76.098	ENSATEG00000018400	rbm47	100	81.282	Anabas_testudineus
ENSCGRG00001000623	-	100	86.364	ENSAPLG00000013974	RBM47	100	86.532	Anas_platyrhynchos
ENSCGRG00001000623	-	100	84.053	ENSACAG00000011833	RBM47	100	84.219	Anolis_carolinensis
ENSCGRG00001000623	-	100	93.624	ENSANAG00000029440	RBM47	100	94.444	Aotus_nancymaae
ENSCGRG00001000623	-	100	82.216	ENSACLG00000016902	rbm47	100	81.186	Astatotilapia_calliptera
ENSCGRG00001000623	-	100	80.412	ENSAMXG00000021794	rbm47	100	79.897	Astyanax_mexicanus
ENSCGRG00001000623	-	100	93.121	ENSBTAG00000002356	RBM47	100	92.953	Bos_taurus
ENSCGRG00001000623	-	100	93.456	ENSCJAG00000019385	RBM47	100	94.180	Callithrix_jacchus
ENSCGRG00001000623	-	96	91.449	ENSCAFG00000015898	RBM47	100	90.285	Canis_familiaris
ENSCGRG00001000623	-	84	92.727	ENSCAFG00020010558	RBM47	94	91.293	Canis_lupus_dingo
ENSCGRG00001000623	-	100	93.121	ENSCHIG00000026214	RBM47	100	92.953	Capra_hircus
ENSCGRG00001000623	-	90	82.520	ENSTSYG00000033612	RBM47	93	87.611	Carlito_syrichta
ENSCGRG00001000623	-	100	84.757	ENSCAPG00000008426	RBM47	100	86.184	Cavia_aperea
ENSCGRG00001000623	-	100	94.415	ENSCPOG00000014100	RBM47	100	93.915	Cavia_porcellus
ENSCGRG00001000623	-	100	93.456	ENSCCAG00000030129	-	100	94.180	Cebus_capucinus
ENSCGRG00001000623	-	99	64.746	ENSCCAG00000024397	-	99	65.085	Cebus_capucinus
ENSCGRG00001000623	-	100	92.953	ENSCATG00000042064	RBM47	100	94.444	Cercocebus_atys
ENSCGRG00001000623	-	100	93.617	ENSCLAG00000001684	RBM47	100	93.122	Chinchilla_lanigera
ENSCGRG00001000623	-	100	92.953	ENSCSAG00000017060	RBM47	100	92.953	Chlorocebus_sabaeus
ENSCGRG00001000623	-	88	86.547	ENSCHOG00000011731	RBM47	88	87.892	Choloepus_hoffmanni
ENSCGRG00001000623	-	100	87.188	ENSCPBG00000013831	RBM47	100	88.020	Chrysemys_picta_bellii
ENSCGRG00001000623	-	100	93.121	ENSCANG00000019997	RBM47	100	94.180	Colobus_angolensis_palliatus
ENSCGRG00001000623	-	100	93.714	ENSCGRG00000014760	-	100	93.714	Cricetulus_griseus_crigri
ENSCGRG00001000623	-	100	99.155	ENSCGRG00000007762	-	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001000623	-	100	74.295	ENSCSEG00000004545	rbm47	100	74.295	Cynoglossus_semilaevis
ENSCGRG00001000623	-	96	85.352	ENSCVAG00000020144	rbm47	100	79.442	Cyprinodon_variegatus
ENSCGRG00001000623	-	96	78.028	ENSDARG00000061985	rbm47	100	79.747	Danio_rerio
ENSCGRG00001000623	-	100	90.924	ENSDNOG00000046854	RBM47	100	91.429	Dasypus_novemcinctus
ENSCGRG00001000623	-	100	91.486	ENSDORG00000010144	Rbm47	100	91.486	Dipodomys_ordii
ENSCGRG00001000623	-	100	91.319	ENSETEG00000009194	RBM47	100	92.154	Echinops_telfairi
ENSCGRG00001000623	-	95	59.240	ENSEBUG00000011912	rbm47	95	75.575	Eptatretus_burgeri
ENSCGRG00001000623	-	100	91.946	ENSEASG00005008443	RBM47	100	92.450	Equus_asinus_asinus
ENSCGRG00001000623	-	100	91.946	ENSECAG00000004400	RBM47	100	92.450	Equus_caballus
ENSCGRG00001000623	-	75	92.641	ENSEEUG00000001194	RBM47	75	93.506	Erinaceus_europaeus
ENSCGRG00001000623	-	100	80.808	ENSELUG00000006148	rbm47	100	79.899	Esox_lucius
ENSCGRG00001000623	-	100	92.617	ENSFCAG00000012399	RBM47	100	92.617	Felis_catus
ENSCGRG00001000623	-	100	87.458	ENSFALG00000002861	RBM47	100	87.625	Ficedula_albicollis
ENSCGRG00001000623	-	100	91.489	ENSFDAG00000016326	RBM47	100	89.782	Fukomys_damarensis
ENSCGRG00001000623	-	96	86.479	ENSFHEG00000007938	rbm47	100	74.542	Fundulus_heteroclitus
ENSCGRG00001000623	-	100	79.241	ENSGMOG00000014802	rbm47	100	72.123	Gadus_morhua
ENSCGRG00001000623	-	72	90.426	ENSGALG00000014267	RBM47	99	90.426	Gallus_gallus
ENSCGRG00001000623	-	72	83.245	ENSGAFG00000020571	rbm47	98	81.915	Gambusia_affinis
ENSCGRG00001000623	-	98	83.014	ENSGACG00000016223	rbm47	100	78.827	Gasterosteus_aculeatus
ENSCGRG00001000623	-	100	87.354	ENSGAGG00000020051	RBM47	100	88.186	Gopherus_agassizii
ENSCGRG00001000623	-	100	92.953	ENSGGOG00000001367	RBM47	100	94.444	Gorilla_gorilla
ENSCGRG00001000623	-	100	82.216	ENSHBUG00000003520	rbm47	100	81.186	Haplochromis_burtoni
ENSCGRG00001000623	-	100	72.053	ENSHGLG00000016914	RBM47	100	93.038	Heterocephalus_glaber_female
ENSCGRG00001000623	-	100	82.799	ENSHGLG00100003071	-	100	82.968	Heterocephalus_glaber_male
ENSCGRG00001000623	-	100	90.756	ENSHGLG00100014028	-	100	93.038	Heterocephalus_glaber_male
ENSCGRG00001000623	-	99	74.875	ENSHCOG00000002074	rbm47	99	81.746	Hippocampus_comes
ENSCGRG00001000623	-	100	79.639	ENSIPUG00000004743	rbm47	100	80.319	Ictalurus_punctatus
ENSCGRG00001000623	-	100	92.295	ENSSTOG00000004727	RBM47	100	94.444	Ictidomys_tridecemlineatus
ENSCGRG00001000623	-	100	92.617	ENSJJAG00000013823	Rbm47	100	92.617	Jaculus_jaculus
ENSCGRG00001000623	-	100	80.102	ENSKMAG00000000084	rbm47	100	81.746	Kryptolebias_marmoratus
ENSCGRG00001000623	-	100	79.082	ENSLBEG00000008436	rbm47	100	80.585	Labrus_bergylta
ENSCGRG00001000623	-	100	86.170	ENSLACG00000007196	RBM47	100	83.167	Latimeria_chalumnae
ENSCGRG00001000623	-	100	80.000	ENSLOCG00000012966	rbm47	95	79.500	Lepisosteus_oculatus
ENSCGRG00001000623	-	100	92.127	ENSLAFG00000011998	RBM47	100	92.127	Loxodonta_africana
ENSCGRG00001000623	-	100	92.953	ENSMFAG00000037967	RBM47	100	94.444	Macaca_fascicularis
ENSCGRG00001000623	-	100	92.953	ENSMMUG00000012036	RBM47	100	94.819	Macaca_mulatta
ENSCGRG00001000623	-	100	93.289	ENSMNEG00000040774	RBM47	100	94.444	Macaca_nemestrina
ENSCGRG00001000623	-	100	95.873	ENSMLEG00000041432	RBM47	100	95.873	Mandrillus_leucophaeus
ENSCGRG00001000623	-	100	82.262	ENSMAMG00000019143	rbm47	100	80.977	Mastacembelus_armatus
ENSCGRG00001000623	-	100	82.216	ENSMZEG00005023659	rbm47	100	81.186	Maylandia_zebra
ENSCGRG00001000623	-	100	87.354	ENSMGAG00000012226	RBM47	100	87.521	Meleagris_gallopavo
ENSCGRG00001000623	-	100	97.714	ENSMAUG00000006493	Rbm47	100	98.939	Mesocricetus_auratus
ENSCGRG00001000623	-	100	84.899	ENSMICG00000026417	RBM47	100	86.243	Microcebus_murinus
ENSCGRG00001000623	-	100	97.639	ENSMOCG00000021170	Rbm47	100	98.670	Microtus_ochrogaster
ENSCGRG00001000623	-	100	75.447	ENSMMOG00000007260	rbm47	100	79.434	Mola_mola
ENSCGRG00001000623	-	100	92.021	ENSMODG00000007003	RBM47	100	89.430	Monodelphis_domestica
ENSCGRG00001000623	-	59	80.696	ENSMODG00000015426	-	97	79.421	Monodelphis_domestica
ENSCGRG00001000623	-	100	84.309	ENSMODG00000020561	-	100	79.530	Monodelphis_domestica
ENSCGRG00001000623	-	100	80.256	ENSMALG00000005167	rbm47	100	82.979	Monopterus_albus
ENSCGRG00001000623	-	100	96.796	MGP_CAROLIEiJ_G0027258	Rbm47	100	98.138	Mus_caroli
ENSCGRG00001000623	-	100	96.796	ENSMUSG00000070780	Rbm47	100	97.872	Mus_musculus
ENSCGRG00001000623	-	100	97.137	MGP_PahariEiJ_G0017040	Rbm47	100	98.404	Mus_pahari
ENSCGRG00001000623	-	100	96.290	MGP_SPRETEiJ_G0028253	Rbm47	100	96.835	Mus_spretus
ENSCGRG00001000623	-	100	93.434	ENSMPUG00000006177	RBM47	94	93.266	Mustela_putorius_furo
ENSCGRG00001000623	-	100	89.933	ENSMLUG00000000889	RBM47	100	90.436	Myotis_lucifugus
ENSCGRG00001000623	-	100	92.929	ENSNGAG00000003325	Rbm47	100	92.593	Nannospalax_galili
ENSCGRG00001000623	-	100	82.732	ENSNBRG00000015092	rbm47	100	81.701	Neolamprologus_brichardi
ENSCGRG00001000623	-	100	92.617	ENSNLEG00000017151	RBM47	100	94.444	Nomascus_leucogenys
ENSCGRG00001000623	-	69	93.036	ENSMEUG00000009516	-	99	86.651	Notamacropus_eugenii
ENSCGRG00001000623	-	85	94.215	ENSOPRG00000016507	-	75	94.215	Ochotona_princeps
ENSCGRG00001000623	-	100	93.351	ENSODEG00000004873	RBM47	100	91.960	Octodon_degus
ENSCGRG00001000623	-	100	81.841	ENSONIG00000009061	rbm47	100	80.818	Oreochromis_niloticus
ENSCGRG00001000623	-	100	85.216	ENSOANG00000008978	RBM47	100	86.047	Ornithorhynchus_anatinus
ENSCGRG00001000623	-	100	91.960	ENSOCUG00000012034	RBM47	100	91.792	Oryctolagus_cuniculus
ENSCGRG00001000623	-	100	82.713	ENSORLG00000005847	rbm47	100	81.383	Oryzias_latipes
ENSCGRG00001000623	-	100	82.713	ENSORLG00020005154	rbm47	100	81.383	Oryzias_latipes_hni
ENSCGRG00001000623	-	100	82.979	ENSORLG00015000066	rbm47	100	81.649	Oryzias_latipes_hsok
ENSCGRG00001000623	-	100	82.979	ENSOMEG00000010730	rbm47	100	81.915	Oryzias_melastigma
ENSCGRG00001000623	-	100	93.434	ENSOGAG00000029367	-	100	93.603	Otolemur_garnettii
ENSCGRG00001000623	-	100	84.512	ENSOGAG00000025193	-	100	84.512	Otolemur_garnettii
ENSCGRG00001000623	-	100	85.354	ENSOARG00000012711	RBM47	100	85.690	Ovis_aries
ENSCGRG00001000623	-	100	92.785	ENSPPAG00000029763	RBM47	100	92.785	Pan_paniscus
ENSCGRG00001000623	-	100	89.430	ENSPPRG00000012873	RBM47	100	94.415	Panthera_pardus
ENSCGRG00001000623	-	85	89.683	ENSPTIG00000017046	RBM47	100	89.881	Panthera_tigris_altaica
ENSCGRG00001000623	-	100	92.953	ENSPTRG00000016006	RBM47	100	94.444	Pan_troglodytes
ENSCGRG00001000623	-	100	92.953	ENSPANG00000005980	RBM47	100	94.444	Papio_anubis
ENSCGRG00001000623	-	96	76.134	ENSPKIG00000005037	rbm47	100	79.793	Paramormyrops_kingsleyae
ENSCGRG00001000623	-	96	78.278	ENSPKIG00000013431	RBM47	98	74.770	Paramormyrops_kingsleyae
ENSCGRG00001000623	-	90	88.743	ENSPSIG00000017516	RBM47	97	88.555	Pelodiscus_sinensis
ENSCGRG00001000623	-	100	74.376	ENSPMGG00000018540	rbm47	100	81.915	Periophthalmus_magnuspinnatus
ENSCGRG00001000623	-	100	97.519	ENSPEMG00000011088	Rbm47	100	98.404	Peromyscus_maniculatus_bairdii
ENSCGRG00001000623	-	96	78.141	ENSPFOG00000007997	rbm47	100	78.481	Poecilia_formosa
ENSCGRG00001000623	-	100	75.706	ENSPLAG00000002072	rbm47	100	80.952	Poecilia_latipinna
ENSCGRG00001000623	-	100	82.979	ENSPMEG00000017492	rbm47	100	81.649	Poecilia_mexicana
ENSCGRG00001000623	-	96	86.197	ENSPREG00000008456	rbm47	100	81.217	Poecilia_reticulata
ENSCGRG00001000623	-	98	82.656	ENSPPYG00000014688	RBM47	100	80.607	Pongo_abelii
ENSCGRG00001000623	-	88	93.734	ENSPCAG00000011879	RBM47	81	94.514	Procavia_capensis
ENSCGRG00001000623	-	100	89.226	ENSPCOG00000023451	RBM47	100	89.683	Propithecus_coquereli
ENSCGRG00001000623	-	100	91.457	ENSPVAG00000003812	RBM47	100	92.127	Pteropus_vampyrus
ENSCGRG00001000623	-	100	82.216	ENSPNYG00000022868	rbm47	100	81.186	Pundamilia_nyererei
ENSCGRG00001000623	-	100	74.593	ENSPNAG00000007940	rbm47	100	80.928	Pygocentrus_nattereri
ENSCGRG00001000623	-	100	97.133	ENSRNOG00000002408	Rbm47	100	97.133	Rattus_norvegicus
ENSCGRG00001000623	-	100	93.121	ENSRBIG00000039601	RBM47	100	94.180	Rhinopithecus_bieti
ENSCGRG00001000623	-	100	93.121	ENSRROG00000044696	RBM47	100	94.180	Rhinopithecus_roxellana
ENSCGRG00001000623	-	100	88.926	ENSSBOG00000028475	RBM47	100	95.052	Saimiri_boliviensis_boliviensis
ENSCGRG00001000623	-	100	89.094	ENSSHAG00000017576	RBM47	100	89.262	Sarcophilus_harrisii
ENSCGRG00001000623	-	90	82.275	ENSSFOG00015012445	rbm47	100	72.112	Scleropages_formosus
ENSCGRG00001000623	-	100	73.090	ENSSFOG00015024101	RBM47	100	72.591	Scleropages_formosus
ENSCGRG00001000623	-	100	73.821	ENSSMAG00000009744	rbm47	100	78.205	Scophthalmus_maximus
ENSCGRG00001000623	-	100	76.872	ENSSDUG00000022684	rbm47	100	82.181	Seriola_dumerili
ENSCGRG00001000623	-	100	77.205	ENSSLDG00000003109	rbm47	100	82.447	Seriola_lalandi_dorsalis
ENSCGRG00001000623	-	84	92.394	ENSSARG00000001735	RBM47	84	92.841	Sorex_araneus
ENSCGRG00001000623	-	100	84.333	ENSSPUG00000007515	RBM47	100	87.831	Sphenodon_punctatus
ENSCGRG00001000623	-	100	77.371	ENSSPAG00000001257	rbm47	100	83.245	Stegastes_partitus
ENSCGRG00001000623	-	100	93.121	ENSSSCG00000008796	RBM47	100	92.953	Sus_scrofa
ENSCGRG00001000623	-	100	87.458	ENSTGUG00000008705	RBM47	100	87.625	Taeniopygia_guttata
ENSCGRG00001000623	-	100	75.208	ENSTRUG00000014050	rbm47	100	74.210	Takifugu_rubripes
ENSCGRG00001000623	-	100	81.234	ENSTNIG00000006127	rbm47	100	73.941	Tetraodon_nigroviridis
ENSCGRG00001000623	-	86	92.000	ENSTBEG00000001607	RBM47	76	92.000	Tupaia_belangeri
ENSCGRG00001000623	-	100	92.256	ENSTTRG00000002839	RBM47	100	92.593	Tursiops_truncatus
ENSCGRG00001000623	-	100	93.423	ENSUAMG00000021346	RBM47	100	93.423	Ursus_americanus
ENSCGRG00001000623	-	57	93.151	ENSVPAG00000000641	-	57	93.151	Vicugna_pacos
ENSCGRG00001000623	-	96	92.147	ENSVVUG00000014774	RBM47	100	90.452	Vulpes_vulpes
ENSCGRG00001000623	-	100	83.529	ENSXETG00000012802	rbm47	100	83.529	Xenopus_tropicalis
ENSCGRG00001000623	-	100	74.953	ENSXCOG00000000780	rbm47	100	81.481	Xiphophorus_couchianus
ENSCGRG00001000623	-	100	83.245	ENSXMAG00000009874	rbm47	100	81.915	Xiphophorus_maculatus