EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00001000705 (Gene tree)
Gene ID: -
Gene Symbol: Aptx
Alias: 2410016G21Rik
Full Name: aprataxin
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 20411 bases
Position: chrscaffold_2:103030649-103051059
Accession: 100774231
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001000936	DcpS_C	PF11969.8	1.6e-34	1	1
ENSCGRP00001000922	DcpS_C	PF11969.8	2.9e-34	1	1
ENSCGRP00001000931	DcpS_C	PF11969.8	2.9e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001000955	-	1035	-	ENSCGRP00001000931	344 (aa)	-	-
ENSCGRT00001000960	-	723	-	ENSCGRP00001000936	240 (aa)	-	-
ENSCGRT00001000946	-	1113	-	ENSCGRP00001000922	341 (aa)	XP_007625573	G3I8V7

Gene Model

Click here to download ENSCGRG00001000705's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001000705's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001000705	Aptx	99	90.110	ENSG00000137074	APTX	94	93.258	Homo_sapiens
ENSCGRG00001000705	Aptx	99	61.504	ENSAPOG00000008785	aptx	99	61.329	Acanthochromis_polyacanthus
ENSCGRG00001000705	Aptx	99	89.560	ENSAMEG00000007648	APTX	96	86.176	Ailuropoda_melanoleuca
ENSCGRG00001000705	Aptx	98	67.442	ENSACIG00000002035	aptx	99	57.229	Amphilophus_citrinellus
ENSCGRG00001000705	Aptx	99	60.714	ENSAOCG00000000634	aptx	99	61.631	Amphiprion_ocellaris
ENSCGRG00001000705	Aptx	99	61.504	ENSAPEG00000017253	aptx	99	61.631	Amphiprion_percula
ENSCGRG00001000705	Aptx	98	67.213	ENSATEG00000017383	aptx	99	60.423	Anabas_testudineus
ENSCGRG00001000705	Aptx	88	64.789	ENSAPLG00000015645	APTX	99	59.248	Anas_platyrhynchos
ENSCGRG00001000705	Aptx	99	64.500	ENSACAG00000003581	APTX	94	62.170	Anolis_carolinensis
ENSCGRG00001000705	Aptx	99	90.110	ENSANAG00000030160	APTX	99	83.939	Aotus_nancymaae
ENSCGRG00001000705	Aptx	99	61.012	ENSACLG00000018887	aptx	99	61.631	Astatotilapia_calliptera
ENSCGRG00001000705	Aptx	98	71.271	ENSAMXG00000039899	aptx	98	58.434	Astyanax_mexicanus
ENSCGRG00001000705	Aptx	99	91.111	ENSBTAG00000013947	APTX	98	83.871	Bos_taurus
ENSCGRG00001000705	Aptx	99	89.011	ENSCJAG00000007940	APTX	99	84.911	Callithrix_jacchus
ENSCGRG00001000705	Aptx	99	89.011	ENSCAFG00000001812	APTX	99	85.588	Canis_familiaris
ENSCGRG00001000705	Aptx	99	89.011	ENSCAFG00020015598	APTX	99	85.588	Canis_lupus_dingo
ENSCGRG00001000705	Aptx	99	90.659	ENSCHIG00000012896	APTX	99	84.412	Capra_hircus
ENSCGRG00001000705	Aptx	99	89.560	ENSTSYG00000003041	APTX	99	85.882	Carlito_syrichta
ENSCGRG00001000705	Aptx	99	78.059	ENSCAPG00000013470	APTX	99	92.593	Cavia_aperea
ENSCGRG00001000705	Aptx	99	91.983	ENSCPOG00000005975	APTX	99	92.308	Cavia_porcellus
ENSCGRG00001000705	Aptx	99	89.011	ENSCCAG00000036783	APTX	99	84.911	Cebus_capucinus
ENSCGRG00001000705	Aptx	99	90.110	ENSCATG00000042639	APTX	96	86.471	Cercocebus_atys
ENSCGRG00001000705	Aptx	99	91.983	ENSCLAG00000012185	APTX	99	91.983	Chinchilla_lanigera
ENSCGRG00001000705	Aptx	99	90.110	ENSCSAG00000009885	APTX	96	86.765	Chlorocebus_sabaeus
ENSCGRG00001000705	Aptx	99	76.667	ENSCPBG00000023973	APTX	99	62.953	Chrysemys_picta_bellii
ENSCGRG00001000705	Aptx	96	48.214	ENSCING00000008741	-	94	38.997	Ciona_intestinalis
ENSCGRG00001000705	Aptx	95	50.867	ENSCSAVG00000008038	-	97	40.947	Ciona_savignyi
ENSCGRG00001000705	Aptx	99	88.957	ENSCANG00000037253	APTX	99	85.000	Colobus_angolensis_palliatus
ENSCGRG00001000705	Aptx	100	100.000	ENSCGRG00000014159	Aptx	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001000705	Aptx	98	66.667	ENSCSEG00000009549	aptx	98	58.006	Cynoglossus_semilaevis
ENSCGRG00001000705	Aptx	98	63.682	ENSCVAG00000011942	aptx	99	59.517	Cyprinodon_variegatus
ENSCGRG00001000705	Aptx	98	72.778	ENSDARG00000027143	aptx	98	59.104	Danio_rerio
ENSCGRG00001000705	Aptx	99	90.055	ENSDNOG00000018498	APTX	96	83.824	Dasypus_novemcinctus
ENSCGRG00001000705	Aptx	99	91.209	ENSDORG00000002139	Aptx	99	91.209	Dipodomys_ordii
ENSCGRG00001000705	Aptx	75	40.000	FBgn0038704	CG5316	87	46.721	Drosophila_melanogaster
ENSCGRG00001000705	Aptx	75	88.333	ENSETEG00000012459	APTX	78	80.935	Echinops_telfairi
ENSCGRG00001000705	Aptx	99	58.286	ENSEBUG00000013914	aptx	96	48.286	Eptatretus_burgeri
ENSCGRG00001000705	Aptx	99	90.000	ENSEASG00005004566	APTX	99	84.118	Equus_asinus_asinus
ENSCGRG00001000705	Aptx	99	90.659	ENSECAG00000012674	APTX	92	84.118	Equus_caballus
ENSCGRG00001000705	Aptx	78	90.977	ENSEEUG00000010693	APTX	95	82.192	Erinaceus_europaeus
ENSCGRG00001000705	Aptx	99	89.011	ENSFCAG00000008728	APTX	99	85.294	Felis_catus
ENSCGRG00001000705	Aptx	99	72.928	ENSFALG00000001230	APTX	99	62.609	Ficedula_albicollis
ENSCGRG00001000705	Aptx	99	90.110	ENSFDAG00000013752	APTX	99	89.873	Fukomys_damarensis
ENSCGRG00001000705	Aptx	75	69.832	ENSFHEG00000021328	aptx	73	55.749	Fundulus_heteroclitus
ENSCGRG00001000705	Aptx	98	67.222	ENSGMOG00000012505	aptx	98	57.831	Gadus_morhua
ENSCGRG00001000705	Aptx	99	72.376	ENSGALG00000001954	APTX	99	60.807	Gallus_gallus
ENSCGRG00001000705	Aptx	98	69.444	ENSGAFG00000005086	aptx	99	59.701	Gambusia_affinis
ENSCGRG00001000705	Aptx	98	63.033	ENSGACG00000017887	aptx	99	59.940	Gasterosteus_aculeatus
ENSCGRG00001000705	Aptx	99	76.667	ENSGAGG00000013230	APTX	99	63.897	Gopherus_agassizii
ENSCGRG00001000705	Aptx	85	86.301	ENSGGOG00000014232	APTX	95	80.069	Gorilla_gorilla
ENSCGRG00001000705	Aptx	99	61.012	ENSHBUG00000021058	aptx	99	61.631	Haplochromis_burtoni
ENSCGRG00001000705	Aptx	99	90.295	ENSHGLG00000015093	APTX	99	90.295	Heterocephalus_glaber_female
ENSCGRG00001000705	Aptx	99	90.295	ENSHGLG00100013482	APTX	99	90.295	Heterocephalus_glaber_male
ENSCGRG00001000705	Aptx	98	66.842	ENSHCOG00000018216	aptx	95	59.819	Hippocampus_comes
ENSCGRG00001000705	Aptx	98	72.222	ENSIPUG00000017548	aptx	99	58.084	Ictalurus_punctatus
ENSCGRG00001000705	Aptx	99	91.561	ENSSTOG00000005185	APTX	99	91.561	Ictidomys_tridecemlineatus
ENSCGRG00001000705	Aptx	99	91.160	ENSJJAG00000015653	Aptx	99	81.682	Jaculus_jaculus
ENSCGRG00001000705	Aptx	99	58.754	ENSKMAG00000000117	aptx	99	59.337	Kryptolebias_marmoratus
ENSCGRG00001000705	Aptx	98	62.500	ENSLBEG00000021489	APTX	99	53.541	Labrus_bergylta
ENSCGRG00001000705	Aptx	98	63.934	ENSLBEG00000015353	aptx	99	59.531	Labrus_bergylta
ENSCGRG00001000705	Aptx	98	72.222	ENSLACG00000003376	APTX	99	60.684	Latimeria_chalumnae
ENSCGRG00001000705	Aptx	98	65.517	ENSLOCG00000011556	aptx	95	60.294	Lepisosteus_oculatus
ENSCGRG00001000705	Aptx	99	87.059	ENSLAFG00000005665	APTX	99	87.059	Loxodonta_africana
ENSCGRG00001000705	Aptx	99	90.110	ENSMFAG00000043141	APTX	96	86.471	Macaca_fascicularis
ENSCGRG00001000705	Aptx	99	90.110	ENSMMUG00000007724	APTX	96	86.471	Macaca_mulatta
ENSCGRG00001000705	Aptx	99	89.560	ENSMNEG00000042341	APTX	99	86.176	Macaca_nemestrina
ENSCGRG00001000705	Aptx	99	89.560	ENSMLEG00000035137	APTX	99	85.882	Mandrillus_leucophaeus
ENSCGRG00001000705	Aptx	98	67.204	ENSMAMG00000018377	aptx	99	59.215	Mastacembelus_armatus
ENSCGRG00001000705	Aptx	98	61.818	ENSMZEG00005022621	aptx	99	61.702	Maylandia_zebra
ENSCGRG00001000705	Aptx	75	72.067	ENSMGAG00000005736	APTX	99	72.067	Meleagris_gallopavo
ENSCGRG00001000705	Aptx	100	96.667	ENSMAUG00000006039	Aptx	100	96.667	Mesocricetus_auratus
ENSCGRG00001000705	Aptx	99	90.659	ENSMICG00000006603	APTX	96	86.982	Microcebus_murinus
ENSCGRG00001000705	Aptx	99	96.653	ENSMOCG00000000869	Aptx	99	96.739	Microtus_ochrogaster
ENSCGRG00001000705	Aptx	99	72.376	ENSMMOG00000007028	aptx	99	60.651	Mola_mola
ENSCGRG00001000705	Aptx	98	65.556	ENSMODG00000003365	APTX	99	61.383	Monodelphis_domestica
ENSCGRG00001000705	Aptx	99	53.869	ENSMALG00000003828	aptx	67	88.095	Monopterus_albus
ENSCGRG00001000705	Aptx	99	94.142	MGP_CAROLIEiJ_G0025897	-	99	94.142	Mus_caroli
ENSCGRG00001000705	Aptx	99	94.561	ENSMUSG00000028411	Aptx	99	94.561	Mus_musculus
ENSCGRG00001000705	Aptx	99	91.848	MGP_PahariEiJ_G0024020	Aptx	99	89.552	Mus_pahari
ENSCGRG00001000705	Aptx	99	89.971	MGP_SPRETEiJ_G0026846	Aptx	97	90.149	Mus_spretus
ENSCGRG00001000705	Aptx	99	88.587	ENSMPUG00000004290	APTX	99	86.176	Mustela_putorius_furo
ENSCGRG00001000705	Aptx	99	88.889	ENSMLUG00000016081	APTX	94	85.882	Myotis_lucifugus
ENSCGRG00001000705	Aptx	99	92.437	ENSNGAG00000016314	Aptx	99	92.437	Nannospalax_galili
ENSCGRG00001000705	Aptx	99	60.417	ENSNBRG00000014199	aptx	99	61.631	Neolamprologus_brichardi
ENSCGRG00001000705	Aptx	99	89.560	ENSNLEG00000032184	APTX	99	87.059	Nomascus_leucogenys
ENSCGRG00001000705	Aptx	98	74.444	ENSMEUG00000004153	APTX	99	63.557	Notamacropus_eugenii
ENSCGRG00001000705	Aptx	78	92.481	ENSOPRG00000012403	APTX	95	80.756	Ochotona_princeps
ENSCGRG00001000705	Aptx	99	91.983	ENSODEG00000015832	-	99	91.983	Octodon_degus
ENSCGRG00001000705	Aptx	99	75.725	ENSODEG00000000097	-	99	75.725	Octodon_degus
ENSCGRG00001000705	Aptx	99	60.092	ENSONIG00000014541	aptx	83	61.261	Oreochromis_niloticus
ENSCGRG00001000705	Aptx	79	76.812	ENSOANG00000009878	APTX	98	61.765	Ornithorhynchus_anatinus
ENSCGRG00001000705	Aptx	99	90.795	ENSOCUG00000025059	-	92	90.795	Oryctolagus_cuniculus
ENSCGRG00001000705	Aptx	99	90.110	ENSOCUG00000000738	-	98	87.241	Oryctolagus_cuniculus
ENSCGRG00001000705	Aptx	98	71.429	ENSORLG00000006237	aptx	98	58.383	Oryzias_latipes
ENSCGRG00001000705	Aptx	98	71.429	ENSORLG00020021478	aptx	98	58.683	Oryzias_latipes_hni
ENSCGRG00001000705	Aptx	98	71.591	ENSORLG00015021873	aptx	85	71.591	Oryzias_latipes_hsok
ENSCGRG00001000705	Aptx	99	51.594	ENSOMEG00000007875	aptx	94	51.917	Oryzias_melastigma
ENSCGRG00001000705	Aptx	99	87.912	ENSOGAG00000005388	APTX	96	84.412	Otolemur_garnettii
ENSCGRG00001000705	Aptx	99	90.659	ENSOARG00000009598	APTX	96	84.412	Ovis_aries
ENSCGRG00001000705	Aptx	99	90.110	ENSPPAG00000030295	APTX	96	86.471	Pan_paniscus
ENSCGRG00001000705	Aptx	99	89.011	ENSPPRG00000017524	APTX	99	85.294	Panthera_pardus
ENSCGRG00001000705	Aptx	99	89.011	ENSPTIG00000020000	APTX	99	85.294	Panthera_tigris_altaica
ENSCGRG00001000705	Aptx	99	90.110	ENSPTRG00000020850	APTX	99	86.471	Pan_troglodytes
ENSCGRG00001000705	Aptx	99	89.560	ENSPANG00000025301	APTX	96	86.176	Papio_anubis
ENSCGRG00001000705	Aptx	98	70.718	ENSPKIG00000013601	aptx	99	59.710	Paramormyrops_kingsleyae
ENSCGRG00001000705	Aptx	99	76.374	ENSPSIG00000010521	APTX	94	76.374	Pelodiscus_sinensis
ENSCGRG00001000705	Aptx	97	70.175	ENSPMGG00000018649	aptx	98	57.602	Periophthalmus_magnuspinnatus
ENSCGRG00001000705	Aptx	99	93.305	ENSPEMG00000007747	Aptx	99	93.305	Peromyscus_maniculatus_bairdii
ENSCGRG00001000705	Aptx	97	56.425	ENSPMAG00000008417	aptx	97	47.384	Petromyzon_marinus
ENSCGRG00001000705	Aptx	98	75.556	ENSPCIG00000029852	APTX	98	67.826	Phascolarctos_cinereus
ENSCGRG00001000705	Aptx	98	61.086	ENSPFOG00000005131	-	99	61.086	Poecilia_formosa
ENSCGRG00001000705	Aptx	98	60.633	ENSPFOG00000004992	aptx	99	60.633	Poecilia_formosa
ENSCGRG00001000705	Aptx	98	61.086	ENSPLAG00000007960	APTX	99	61.086	Poecilia_latipinna
ENSCGRG00001000705	Aptx	98	61.086	ENSPLAG00000007906	aptx	99	61.086	Poecilia_latipinna
ENSCGRG00001000705	Aptx	98	61.086	ENSPMEG00000019789	APTX	99	61.086	Poecilia_mexicana
ENSCGRG00001000705	Aptx	98	61.538	ENSPMEG00000018504	aptx	99	61.538	Poecilia_mexicana
ENSCGRG00001000705	Aptx	99	54.412	ENSPREG00000004375	aptx	99	54.627	Poecilia_reticulata
ENSCGRG00001000705	Aptx	99	90.110	ENSPPYG00000019142	APTX	96	87.059	Pongo_abelii
ENSCGRG00001000705	Aptx	99	72.941	ENSPCAG00000010014	APTX	99	72.941	Procavia_capensis
ENSCGRG00001000705	Aptx	99	91.209	ENSPCOG00000016780	APTX	99	87.941	Propithecus_coquereli
ENSCGRG00001000705	Aptx	99	86.243	ENSPVAG00000011468	APTX	96	83.529	Pteropus_vampyrus
ENSCGRG00001000705	Aptx	99	61.012	ENSPNYG00000007675	aptx	99	61.631	Pundamilia_nyererei
ENSCGRG00001000705	Aptx	98	60.287	ENSPNAG00000015984	aptx	99	55.882	Pygocentrus_nattereri
ENSCGRG00001000705	Aptx	99	93.478	ENSRNOG00000006582	Aptx	99	86.527	Rattus_norvegicus
ENSCGRG00001000705	Aptx	99	88.957	ENSRBIG00000042913	APTX	99	85.000	Rhinopithecus_bieti
ENSCGRG00001000705	Aptx	99	88.957	ENSRROG00000035395	APTX	99	85.294	Rhinopithecus_roxellana
ENSCGRG00001000705	Aptx	99	89.560	ENSSBOG00000025215	APTX	99	84.706	Saimiri_boliviensis_boliviensis
ENSCGRG00001000705	Aptx	98	73.889	ENSSHAG00000012205	APTX	95	66.864	Sarcophilus_harrisii
ENSCGRG00001000705	Aptx	98	75.978	ENSSFOG00015009267	aptx	99	61.932	Scleropages_formosus
ENSCGRG00001000705	Aptx	98	71.429	ENSSMAG00000008839	aptx	98	60.606	Scophthalmus_maximus
ENSCGRG00001000705	Aptx	98	64.912	ENSSDUG00000001989	aptx	99	61.027	Seriola_dumerili
ENSCGRG00001000705	Aptx	98	66.667	ENSSLDG00000004915	aptx	99	59.819	Seriola_lalandi_dorsalis
ENSCGRG00001000705	Aptx	99	74.586	ENSSPUG00000008994	APTX	86	64.689	Sphenodon_punctatus
ENSCGRG00001000705	Aptx	98	67.164	ENSSPAG00000020373	aptx	99	62.236	Stegastes_partitus
ENSCGRG00001000705	Aptx	99	90.659	ENSSSCG00000011001	APTX	99	85.882	Sus_scrofa
ENSCGRG00001000705	Aptx	99	70.879	ENSTGUG00000001441	APTX	99	62.018	Taeniopygia_guttata
ENSCGRG00001000705	Aptx	98	67.978	ENSTRUG00000009794	aptx	99	58.006	Takifugu_rubripes
ENSCGRG00001000705	Aptx	98	69.101	ENSTNIG00000010570	aptx	98	60.423	Tetraodon_nigroviridis
ENSCGRG00001000705	Aptx	99	91.824	ENSTBEG00000008504	APTX	96	81.471	Tupaia_belangeri
ENSCGRG00001000705	Aptx	93	80.503	ENSTTRG00000007384	APTX	96	80.503	Tursiops_truncatus
ENSCGRG00001000705	Aptx	99	88.750	ENSUAMG00000003700	APTX	97	85.588	Ursus_americanus
ENSCGRG00001000705	Aptx	99	88.462	ENSUMAG00000005837	APTX	99	85.588	Ursus_maritimus
ENSCGRG00001000705	Aptx	93	88.095	ENSVPAG00000001297	APTX	79	86.364	Vicugna_pacos
ENSCGRG00001000705	Aptx	99	89.011	ENSVVUG00000021130	APTX	99	85.588	Vulpes_vulpes
ENSCGRG00001000705	Aptx	98	69.274	ENSXETG00000024143	aptx	99	59.357	Xenopus_tropicalis
ENSCGRG00001000705	Aptx	98	69.832	ENSXCOG00000005020	aptx	99	57.835	Xiphophorus_couchianus
ENSCGRG00001000705	Aptx	98	70.000	ENSXMAG00000022086	aptx	89	70.000	Xiphophorus_maculatus