EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00001000816 (Gene tree)
Gene ID: -
Gene Symbol: Ythdc1
Alias: A730098D12Rik
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 30050 bases
Position: chrscaffold_13:52566728-52596777
Accession: 2443713
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001001088	YTH	PF04146.15	9.8e-40	1	1
ENSCGRP00001001075	YTH	PF04146.15	1e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001001112	-	2124	-	ENSCGRP00001001088	707 (aa)	-	-
ENSCGRT00001001099	-	5474	-	ENSCGRP00001001075	733 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001000816's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001000816's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001000816	Ythdc1	100	97.415	ENSG00000083896	YTHDC1	100	97.415	Homo_sapiens
ENSCGRG00001000816	Ythdc1	57	59.102	ENSAPOG00000013997	ythdc1	57	62.250	Acanthochromis_polyacanthus
ENSCGRG00001000816	Ythdc1	100	93.434	ENSAMEG00000005688	YTHDC1	100	93.434	Ailuropoda_melanoleuca
ENSCGRG00001000816	Ythdc1	71	57.412	ENSACIG00000019728	ythdc1	80	59.398	Amphilophus_citrinellus
ENSCGRG00001000816	Ythdc1	56	61.687	ENSAOCG00000000239	ythdc1	59	67.464	Amphiprion_ocellaris
ENSCGRG00001000816	Ythdc1	50	64.151	ENSAPEG00000000618	ythdc1	53	68.661	Amphiprion_percula
ENSCGRG00001000816	Ythdc1	92	83.482	ENSAPLG00000009921	YTHDC1	92	83.929	Anas_platyrhynchos
ENSCGRG00001000816	Ythdc1	93	83.284	ENSACAG00000009697	YTHDC1	93	82.551	Anolis_carolinensis
ENSCGRG00001000816	Ythdc1	100	97.183	ENSANAG00000001522	YTHDC1	100	97.183	Aotus_nancymaae
ENSCGRG00001000816	Ythdc1	93	51.825	ENSACLG00000019371	ythdc1	59	66.029	Astatotilapia_calliptera
ENSCGRG00001000816	Ythdc1	93	64.793	ENSAMXG00000006978	ythdc1	92	65.379	Astyanax_mexicanus
ENSCGRG00001000816	Ythdc1	93	91.935	ENSBTAG00000015572	YTHDC1	93	92.522	Bos_taurus
ENSCGRG00001000816	Ythdc1	100	97.324	ENSCJAG00000009934	YTHDC1	100	97.324	Callithrix_jacchus
ENSCGRG00001000816	Ythdc1	100	93.297	ENSCAFG00000002821	YTHDC1	100	93.297	Canis_familiaris
ENSCGRG00001000816	Ythdc1	100	93.297	ENSCAFG00020027112	YTHDC1	100	93.297	Canis_lupus_dingo
ENSCGRG00001000816	Ythdc1	91	87.176	ENSCHIG00000004810	YTHDC1	95	92.381	Capra_hircus
ENSCGRG00001000816	Ythdc1	100	97.320	ENSTSYG00000011668	YTHDC1	100	97.320	Carlito_syrichta
ENSCGRG00001000816	Ythdc1	90	70.423	ENSCAPG00000008722	YTHDC1	90	69.350	Cavia_aperea
ENSCGRG00001000816	Ythdc1	100	89.986	ENSCPOG00000010929	YTHDC1	100	89.986	Cavia_porcellus
ENSCGRG00001000816	Ythdc1	100	97.461	ENSCCAG00000035754	YTHDC1	100	97.461	Cebus_capucinus
ENSCGRG00001000816	Ythdc1	100	97.283	ENSCATG00000036320	YTHDC1	100	97.283	Cercocebus_atys
ENSCGRG00001000816	Ythdc1	99	96.690	ENSCLAG00000005482	YTHDC1	99	96.690	Chinchilla_lanigera
ENSCGRG00001000816	Ythdc1	100	96.332	ENSCSAG00000005252	YTHDC1	100	96.332	Chlorocebus_sabaeus
ENSCGRG00001000816	Ythdc1	92	85.420	ENSCPBG00000021965	YTHDC1	94	85.366	Chrysemys_picta_bellii
ENSCGRG00001000816	Ythdc1	100	97.324	ENSCANG00000004769	YTHDC1	100	97.324	Colobus_angolensis_palliatus
ENSCGRG00001000816	Ythdc1	99	100.000	ENSCGRG00000009807	Ythdc1	99	100.000	Cricetulus_griseus_crigri
ENSCGRG00001000816	Ythdc1	56	60.508	ENSCSEG00000020404	ythdc1	59	66.667	Cynoglossus_semilaevis
ENSCGRG00001000816	Ythdc1	56	60.093	ENSCVAG00000022349	ythdc1	94	53.792	Cyprinodon_variegatus
ENSCGRG00001000816	Ythdc1	93	63.772	ENSDARG00000051953	ythdc1	58	78.133	Danio_rerio
ENSCGRG00001000816	Ythdc1	93	92.815	ENSDNOG00000004949	YTHDC1	93	93.402	Dasypus_novemcinctus
ENSCGRG00001000816	Ythdc1	99	96.974	ENSDORG00000013045	Ythdc1	100	96.862	Dipodomys_ordii
ENSCGRG00001000816	Ythdc1	77	95.636	ENSETEG00000001878	YTHDC1	70	100.000	Echinops_telfairi
ENSCGRG00001000816	Ythdc1	100	95.264	ENSEASG00005018383	YTHDC1	100	95.264	Equus_asinus_asinus
ENSCGRG00001000816	Ythdc1	100	93.297	ENSECAG00000018303	YTHDC1	100	93.297	Equus_caballus
ENSCGRG00001000816	Ythdc1	93	91.642	ENSEEUG00000015466	YTHDC1	93	92.229	Erinaceus_europaeus
ENSCGRG00001000816	Ythdc1	93	62.009	ENSELUG00000014029	ythdc1	93	62.482	Esox_lucius
ENSCGRG00001000816	Ythdc1	100	93.425	ENSFCAG00000026791	YTHDC1	100	93.425	Felis_catus
ENSCGRG00001000816	Ythdc1	69	87.838	ENSFALG00000006581	YTHDC1	87	91.885	Ficedula_albicollis
ENSCGRG00001000816	Ythdc1	99	95.310	ENSFDAG00000018560	YTHDC1	100	95.310	Fukomys_damarensis
ENSCGRG00001000816	Ythdc1	66	60.317	ENSFHEG00000001286	ythdc1	60	55.000	Fundulus_heteroclitus
ENSCGRG00001000816	Ythdc1	63	63.475	ENSGMOG00000018815	ythdc1	73	63.475	Gadus_morhua
ENSCGRG00001000816	Ythdc1	92	85.736	ENSGALG00000035906	YTHDC1	85	85.604	Gallus_gallus
ENSCGRG00001000816	Ythdc1	50	65.637	ENSGAFG00000001759	ythdc1	54	67.029	Gambusia_affinis
ENSCGRG00001000816	Ythdc1	57	62.093	ENSGACG00000015486	ythdc1	57	62.530	Gasterosteus_aculeatus
ENSCGRG00001000816	Ythdc1	93	86.657	ENSGAGG00000007108	YTHDC1	93	85.484	Gopherus_agassizii
ENSCGRG00001000816	Ythdc1	100	97.283	ENSGGOG00000021958	YTHDC1	100	97.283	Gorilla_gorilla
ENSCGRG00001000816	Ythdc1	93	51.971	ENSHBUG00000019288	ythdc1	59	66.029	Haplochromis_burtoni
ENSCGRG00001000816	Ythdc1	100	96.463	ENSHGLG00000006319	-	100	96.463	Heterocephalus_glaber_female
ENSCGRG00001000816	Ythdc1	95	69.264	ENSHGLG00000003239	-	86	71.893	Heterocephalus_glaber_female
ENSCGRG00001000816	Ythdc1	95	67.816	ENSHGLG00100008060	-	86	70.398	Heterocephalus_glaber_male
ENSCGRG00001000816	Ythdc1	99	95.592	ENSHGLG00100001556	-	100	95.592	Heterocephalus_glaber_male
ENSCGRG00001000816	Ythdc1	54	70.213	ENSHCOG00000001520	ythdc1	84	70.213	Hippocampus_comes
ENSCGRG00001000816	Ythdc1	93	66.475	ENSIPUG00000018136	ythdc1	61	82.005	Ictalurus_punctatus
ENSCGRG00001000816	Ythdc1	100	97.147	ENSSTOG00000013652	YTHDC1	100	97.147	Ictidomys_tridecemlineatus
ENSCGRG00001000816	Ythdc1	92	91.815	ENSJJAG00000010268	Ythdc1	93	93.006	Jaculus_jaculus
ENSCGRG00001000816	Ythdc1	57	59.417	ENSKMAG00000006483	ythdc1	85	65.238	Kryptolebias_marmoratus
ENSCGRG00001000816	Ythdc1	65	63.462	ENSLBEG00000020831	ythdc1	72	75.000	Labrus_bergylta
ENSCGRG00001000816	Ythdc1	87	72.713	ENSLACG00000004893	YTHDC1	92	72.798	Latimeria_chalumnae
ENSCGRG00001000816	Ythdc1	93	72.661	ENSLOCG00000003045	ythdc1	92	86.792	Lepisosteus_oculatus
ENSCGRG00001000816	Ythdc1	93	92.658	ENSLAFG00000021592	YTHDC1	93	95.007	Loxodonta_africana
ENSCGRG00001000816	Ythdc1	100	97.418	ENSMFAG00000031927	YTHDC1	100	97.418	Macaca_fascicularis
ENSCGRG00001000816	Ythdc1	100	96.332	ENSMMUG00000002265	YTHDC1	100	97.253	Macaca_mulatta
ENSCGRG00001000816	Ythdc1	100	97.324	ENSMNEG00000033751	YTHDC1	100	97.324	Macaca_nemestrina
ENSCGRG00001000816	Ythdc1	100	97.183	ENSMLEG00000042147	YTHDC1	100	97.183	Mandrillus_leucophaeus
ENSCGRG00001000816	Ythdc1	56	61.631	ENSMAMG00000013122	ythdc1	58	66.587	Mastacembelus_armatus
ENSCGRG00001000816	Ythdc1	93	51.825	ENSMZEG00005023173	ythdc1	59	66.029	Maylandia_zebra
ENSCGRG00001000816	Ythdc1	93	83.578	ENSMGAG00000010391	YTHDC1	92	85.044	Meleagris_gallopavo
ENSCGRG00001000816	Ythdc1	100	99.591	ENSMAUG00000001286	Ythdc1	100	99.591	Mesocricetus_auratus
ENSCGRG00001000816	Ythdc1	100	96.879	ENSMICG00000034640	YTHDC1	100	96.879	Microcebus_murinus
ENSCGRG00001000816	Ythdc1	100	98.639	ENSMOCG00000020201	Ythdc1	100	98.639	Microtus_ochrogaster
ENSCGRG00001000816	Ythdc1	65	56.695	ENSMODG00000009173	-	88	60.190	Monodelphis_domestica
ENSCGRG00001000816	Ythdc1	87	69.213	ENSMODG00000014337	-	95	69.554	Monodelphis_domestica
ENSCGRG00001000816	Ythdc1	96	50.847	ENSMODG00000010076	-	96	51.395	Monodelphis_domestica
ENSCGRG00001000816	Ythdc1	93	87.812	ENSMODG00000020754	-	92	87.078	Monodelphis_domestica
ENSCGRG00001000816	Ythdc1	59	69.492	ENSMALG00000013412	ythdc1	56	68.768	Monopterus_albus
ENSCGRG00001000816	Ythdc1	100	98.100	MGP_CAROLIEiJ_G0027347	Ythdc1	100	98.100	Mus_caroli
ENSCGRG00001000816	Ythdc1	100	97.965	ENSMUSG00000035851	Ythdc1	100	97.965	Mus_musculus
ENSCGRG00001000816	Ythdc1	100	98.236	MGP_PahariEiJ_G0017126	Ythdc1	100	98.236	Mus_pahari
ENSCGRG00001000816	Ythdc1	100	98.236	MGP_SPRETEiJ_G0028339	Ythdc1	100	98.236	Mus_spretus
ENSCGRG00001000816	Ythdc1	99	95.034	ENSMLUG00000016300	YTHDC1	100	95.034	Myotis_lucifugus
ENSCGRG00001000816	Ythdc1	59	95.952	ENSNGAG00000024000	Ythdc1	93	95.724	Nannospalax_galili
ENSCGRG00001000816	Ythdc1	60	62.121	ENSNBRG00000007663	ythdc1	70	65.777	Neolamprologus_brichardi
ENSCGRG00001000816	Ythdc1	99	96.424	ENSNLEG00000009202	YTHDC1	99	96.424	Nomascus_leucogenys
ENSCGRG00001000816	Ythdc1	82	81.605	ENSMEUG00000007128	YTHDC1	81	81.605	Notamacropus_eugenii
ENSCGRG00001000816	Ythdc1	75	97.734	ENSOPRG00000008986	YTHDC1	74	97.734	Ochotona_princeps
ENSCGRG00001000816	Ythdc1	100	95.102	ENSODEG00000001715	YTHDC1	100	95.102	Octodon_degus
ENSCGRG00001000816	Ythdc1	93	52.263	ENSONIG00000012651	ythdc1	59	66.507	Oreochromis_niloticus
ENSCGRG00001000816	Ythdc1	89	77.217	ENSOANG00000014398	YTHDC1	55	97.215	Ornithorhynchus_anatinus
ENSCGRG00001000816	Ythdc1	93	80.409	ENSOCUG00000015886	YTHDC1	57	93.596	Oryctolagus_cuniculus
ENSCGRG00001000816	Ythdc1	56	61.165	ENSORLG00000030544	ythdc1	60	66.747	Oryzias_latipes
ENSCGRG00001000816	Ythdc1	56	60.145	ENSORLG00020019316	ythdc1	60	66.747	Oryzias_latipes_hni
ENSCGRG00001000816	Ythdc1	56	61.275	ENSOMEG00000000551	ythdc1	94	54.383	Oryzias_melastigma
ENSCGRG00001000816	Ythdc1	93	96.035	ENSOGAG00000003362	YTHDC1	93	96.035	Otolemur_garnettii
ENSCGRG00001000816	Ythdc1	93	91.935	ENSOARG00000008633	YTHDC1	93	92.522	Ovis_aries
ENSCGRG00001000816	Ythdc1	100	97.415	ENSPPAG00000041315	YTHDC1	100	97.415	Pan_paniscus
ENSCGRG00001000816	Ythdc1	100	96.070	ENSPPRG00000011979	YTHDC1	100	96.070	Panthera_pardus
ENSCGRG00001000816	Ythdc1	99	92.170	ENSPTIG00000015527	YTHDC1	100	92.170	Panthera_tigris_altaica
ENSCGRG00001000816	Ythdc1	100	97.415	ENSPTRG00000016105	YTHDC1	100	97.415	Pan_troglodytes
ENSCGRG00001000816	Ythdc1	100	97.283	ENSPANG00000021590	YTHDC1	100	97.283	Papio_anubis
ENSCGRG00001000816	Ythdc1	93	67.341	ENSPKIG00000018497	ythdc1	93	67.816	Paramormyrops_kingsleyae
ENSCGRG00001000816	Ythdc1	92	85.736	ENSPSIG00000002782	YTHDC1	92	84.547	Pelodiscus_sinensis
ENSCGRG00001000816	Ythdc1	55	56.364	ENSPMGG00000000970	-	72	64.460	Periophthalmus_magnuspinnatus
ENSCGRG00001000816	Ythdc1	99	99.428	ENSPEMG00000013850	Ythdc1	100	99.428	Peromyscus_maniculatus_bairdii
ENSCGRG00001000816	Ythdc1	93	88.397	ENSPCIG00000006870	YTHDC1	92	87.634	Phascolarctos_cinereus
ENSCGRG00001000816	Ythdc1	56	60.000	ENSPFOG00000013404	ythdc1	60	65.385	Poecilia_formosa
ENSCGRG00001000816	Ythdc1	56	60.000	ENSPLAG00000011079	ythdc1	85	64.904	Poecilia_latipinna
ENSCGRG00001000816	Ythdc1	56	60.000	ENSPMEG00000009238	ythdc1	60	65.385	Poecilia_mexicana
ENSCGRG00001000816	Ythdc1	71	57.783	ENSPREG00000016973	ythdc1	93	49.849	Poecilia_reticulata
ENSCGRG00001000816	Ythdc1	87	96.250	ENSPPYG00000014726	YTHDC1	100	96.250	Pongo_abelii
ENSCGRG00001000816	Ythdc1	77	89.091	ENSPCAG00000009607	YTHDC1	75	88.636	Procavia_capensis
ENSCGRG00001000816	Ythdc1	93	89.574	ENSPCOG00000019105	YTHDC1	92	91.043	Propithecus_coquereli
ENSCGRG00001000816	Ythdc1	93	90.511	ENSPVAG00000015551	YTHDC1	93	90.365	Pteropus_vampyrus
ENSCGRG00001000816	Ythdc1	93	51.825	ENSPNYG00000011687	ythdc1	59	66.029	Pundamilia_nyererei
ENSCGRG00001000816	Ythdc1	93	69.010	ENSPNAG00000028365	ythdc1	93	68.383	Pygocentrus_nattereri
ENSCGRG00001000816	Ythdc1	100	97.564	ENSRNOG00000001996	Ythdc1	100	97.564	Rattus_norvegicus
ENSCGRG00001000816	Ythdc1	99	96.149	ENSRBIG00000028279	YTHDC1	99	96.149	Rhinopithecus_bieti
ENSCGRG00001000816	Ythdc1	100	97.324	ENSRROG00000035028	YTHDC1	100	97.324	Rhinopithecus_roxellana
ENSCGRG00001000816	Ythdc1	100	97.418	ENSSBOG00000022353	YTHDC1	100	97.418	Saimiri_boliviensis_boliviensis
ENSCGRG00001000816	Ythdc1	93	86.637	ENSSHAG00000002538	YTHDC1	91	86.905	Sarcophilus_harrisii
ENSCGRG00001000816	Ythdc1	93	67.626	ENSSFOG00015003298	ythdc1	60	84.186	Scleropages_formosus
ENSCGRG00001000816	Ythdc1	56	60.235	ENSSMAG00000009086	ythdc1	94	53.801	Scophthalmus_maximus
ENSCGRG00001000816	Ythdc1	56	60.775	ENSSDUG00000022008	ythdc1	94	56.742	Seriola_dumerili
ENSCGRG00001000816	Ythdc1	56	60.775	ENSSLDG00000007926	ythdc1	59	66.986	Seriola_lalandi_dorsalis
ENSCGRG00001000816	Ythdc1	79	95.563	ENSSARG00000010960	YTHDC1	100	95.563	Sorex_araneus
ENSCGRG00001000816	Ythdc1	93	81.942	ENSSPUG00000009357	YTHDC1	94	81.599	Sphenodon_punctatus
ENSCGRG00001000816	Ythdc1	57	61.036	ENSSPAG00000011449	ythdc1	94	55.378	Stegastes_partitus
ENSCGRG00001000816	Ythdc1	100	95.412	ENSSSCG00000035505	YTHDC1	100	95.412	Sus_scrofa
ENSCGRG00001000816	Ythdc1	93	85.191	ENSTGUG00000004452	-	92	84.604	Taeniopygia_guttata
ENSCGRG00001000816	Ythdc1	64	61.224	ENSTRUG00000010142	ythdc1	69	71.795	Takifugu_rubripes
ENSCGRG00001000816	Ythdc1	86	58.849	ENSTNIG00000013243	ythdc1	89	64.384	Tetraodon_nigroviridis
ENSCGRG00001000816	Ythdc1	93	86.197	ENSTBEG00000011546	YTHDC1	92	86.050	Tupaia_belangeri
ENSCGRG00001000816	Ythdc1	93	91.667	ENSTTRG00000005083	YTHDC1	93	92.105	Tursiops_truncatus
ENSCGRG00001000816	Ythdc1	93	95.764	ENSUAMG00000010388	YTHDC1	100	95.764	Ursus_americanus
ENSCGRG00001000816	Ythdc1	99	82.231	ENSUMAG00000013668	YTHDC1	98	82.231	Ursus_maritimus
ENSCGRG00001000816	Ythdc1	100	96.333	ENSVPAG00000009040	YTHDC1	100	96.333	Vicugna_pacos
ENSCGRG00001000816	Ythdc1	99	95.890	ENSVVUG00000005387	YTHDC1	98	95.890	Vulpes_vulpes
ENSCGRG00001000816	Ythdc1	92	73.088	ENSXETG00000017960	ythdc1	91	73.235	Xenopus_tropicalis
ENSCGRG00001000816	Ythdc1	56	58.933	ENSXMAG00000005196	ythdc1	61	64.663	Xiphophorus_maculatus