EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001001076 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 19720 bases
Position: chrscaffold_6:51893412-51913131
Accession: 100766215
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001001354	zf-U11-48K	PF05253.12	1.8e-08	1	1
ENSCGRP00001001352	zf-U11-48K	PF05253.12	2.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001001420	-	837	-	ENSCGRP00001001354	278 (aa)	-	-
ENSCGRT00001001415	-	1014	-	ENSCGRP00001001352	337 (aa)	XP_003502052	UPI00022F490B

Gene Model

Click here to download ENSCGRG00001001076's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001001076's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001001076	-	99	77.778	ENSCGRG00001008805	-	95	76.577

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001001076	-	100	87.611	ENSG00000168566	SNRNP48	100	88.496	Homo_sapiens
ENSCGRG00001001076	-	82	47.183	ENSAPOG00000021430	snrnp48	96	43.149	Acanthochromis_polyacanthus
ENSCGRG00001001076	-	99	84.726	ENSAMEG00000017349	SNRNP48	100	85.014	Ailuropoda_melanoleuca
ENSCGRG00001001076	-	89	44.444	ENSACIG00000002032	snrnp48	96	41.964	Amphilophus_citrinellus
ENSCGRG00001001076	-	82	47.183	ENSAOCG00000010562	snrnp48	96	43.516	Amphiprion_ocellaris
ENSCGRG00001001076	-	82	47.163	ENSAPEG00000003231	snrnp48	96	43.478	Amphiprion_percula
ENSCGRG00001001076	-	77	48.529	ENSATEG00000020210	snrnp48	81	48.214	Anabas_testudineus
ENSCGRG00001001076	-	82	64.931	ENSACAG00000002811	SNRNP48	89	64.931	Anolis_carolinensis
ENSCGRG00001001076	-	100	87.021	ENSANAG00000033538	SNRNP48	100	87.906	Aotus_nancymaae
ENSCGRG00001001076	-	93	45.652	ENSAMXG00000015309	snrnp48	97	44.118	Astyanax_mexicanus
ENSCGRG00001001076	-	100	82.353	ENSBTAG00000001123	SNRNP48	100	83.529	Bos_taurus
ENSCGRG00001001076	-	100	87.611	ENSCJAG00000021330	SNRNP48	100	88.496	Callithrix_jacchus
ENSCGRG00001001076	-	99	87.798	ENSCAFG00000009574	SNRNP48	83	87.834	Canis_familiaris
ENSCGRG00001001076	-	99	87.834	ENSCAFG00020013203	SNRNP48	99	88.131	Canis_lupus_dingo
ENSCGRG00001001076	-	100	83.824	ENSCHIG00000015216	SNRNP48	100	85.000	Capra_hircus
ENSCGRG00001001076	-	100	87.021	ENSTSYG00000000698	SNRNP48	100	87.906	Carlito_syrichta
ENSCGRG00001001076	-	91	82.085	ENSCAPG00000006768	SNRNP48	100	82.085	Cavia_aperea
ENSCGRG00001001076	-	100	85.546	ENSCPOG00000007910	SNRNP48	100	85.546	Cavia_porcellus
ENSCGRG00001001076	-	100	86.136	ENSCCAG00000035652	SNRNP48	100	87.021	Cebus_capucinus
ENSCGRG00001001076	-	100	87.021	ENSCATG00000033947	SNRNP48	100	87.906	Cercocebus_atys
ENSCGRG00001001076	-	100	86.136	ENSCLAG00000003765	SNRNP48	100	87.021	Chinchilla_lanigera
ENSCGRG00001001076	-	100	87.611	ENSCSAG00000007409	SNRNP48	100	88.496	Chlorocebus_sabaeus
ENSCGRG00001001076	-	84	64.452	ENSCPBG00000019146	SNRNP48	91	64.452	Chrysemys_picta_bellii
ENSCGRG00001001076	-	100	87.611	ENSCANG00000030017	SNRNP48	100	88.496	Colobus_angolensis_palliatus
ENSCGRG00001001076	-	100	100.000	ENSCGRG00000007781	Snrnp48	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001001076	-	77	47.529	ENSCSEG00000000722	snrnp48	72	47.529	Cynoglossus_semilaevis
ENSCGRG00001001076	-	95	43.976	ENSCVAG00000019829	snrnp48	67	48.302	Cyprinodon_variegatus
ENSCGRG00001001076	-	82	45.035	ENSDARG00000039989	snrnp48	96	42.643	Danio_rerio
ENSCGRG00001001076	-	99	86.269	ENSDNOG00000014978	SNRNP48	99	86.866	Dasypus_novemcinctus
ENSCGRG00001001076	-	99	85.841	ENSDORG00000015140	Snrnp48	100	85.000	Dipodomys_ordii
ENSCGRG00001001076	-	68	34.010	ENSEBUG00000016376	-	89	33.182	Eptatretus_burgeri
ENSCGRG00001001076	-	99	87.870	ENSEASG00005012021	SNRNP48	99	88.166	Equus_asinus_asinus
ENSCGRG00001001076	-	100	88.496	ENSECAG00000026937	SNRNP48	100	88.791	Equus_caballus
ENSCGRG00001001076	-	100	66.962	ENSEEUG00000015437	SNRNP48	99	66.962	Erinaceus_europaeus
ENSCGRG00001001076	-	88	47.231	ENSELUG00000009766	snrnp48	78	48.421	Esox_lucius
ENSCGRG00001001076	-	100	87.611	ENSFCAG00000018853	SNRNP48	100	87.906	Felis_catus
ENSCGRG00001001076	-	83	63.699	ENSFALG00000007797	SNRNP48	93	64.384	Ficedula_albicollis
ENSCGRG00001001076	-	99	84.320	ENSFDAG00000009231	SNRNP48	100	85.841	Fukomys_damarensis
ENSCGRG00001001076	-	59	55.665	ENSFHEG00000014647	snrnp48	97	46.465	Fundulus_heteroclitus
ENSCGRG00001001076	-	73	46.774	ENSGMOG00000018599	-	81	46.816	Gadus_morhua
ENSCGRG00001001076	-	78	65.568	ENSGALG00000013005	SNRNP48	92	65.568	Gallus_gallus
ENSCGRG00001001076	-	95	42.319	ENSGAFG00000021639	snrnp48	94	43.787	Gambusia_affinis
ENSCGRG00001001076	-	74	49.004	ENSGACG00000017756	-	96	45.289	Gasterosteus_aculeatus
ENSCGRG00001001076	-	84	63.667	ENSGAGG00000000865	SNRNP48	97	63.667	Gopherus_agassizii
ENSCGRG00001001076	-	100	87.611	ENSGGOG00000013220	SNRNP48	100	88.496	Gorilla_gorilla
ENSCGRG00001001076	-	75	47.266	ENSHBUG00000017066	snrnp48	95	41.813	Haplochromis_burtoni
ENSCGRG00001001076	-	99	85.799	ENSHGLG00000015241	SNRNP48	100	86.431	Heterocephalus_glaber_female
ENSCGRG00001001076	-	99	85.799	ENSHGLG00100010027	SNRNP48	100	86.431	Heterocephalus_glaber_male
ENSCGRG00001001076	-	72	47.561	ENSHCOG00000014066	snrnp48	92	41.983	Hippocampus_comes
ENSCGRG00001001076	-	100	90.855	ENSSTOG00000014635	SNRNP48	100	92.000	Ictidomys_tridecemlineatus
ENSCGRG00001001076	-	100	85.841	ENSJJAG00000011495	Snrnp48	100	86.136	Jaculus_jaculus
ENSCGRG00001001076	-	91	44.156	ENSKMAG00000016514	snrnp48	94	42.353	Kryptolebias_marmoratus
ENSCGRG00001001076	-	77	46.743	ENSLBEG00000026249	snrnp48	95	42.857	Labrus_bergylta
ENSCGRG00001001076	-	98	53.134	ENSLACG00000003958	SNRNP48	99	52.035	Latimeria_chalumnae
ENSCGRG00001001076	-	84	51.903	ENSLOCG00000004187	snrnp48	95	49.258	Lepisosteus_oculatus
ENSCGRG00001001076	-	100	83.481	ENSLAFG00000011152	SNRNP48	100	84.366	Loxodonta_africana
ENSCGRG00001001076	-	100	87.906	ENSMFAG00000045216	SNRNP48	100	88.791	Macaca_fascicularis
ENSCGRG00001001076	-	100	87.906	ENSMMUG00000014785	SNRNP48	100	88.791	Macaca_mulatta
ENSCGRG00001001076	-	100	87.611	ENSMNEG00000042269	SNRNP48	100	88.496	Macaca_nemestrina
ENSCGRG00001001076	-	100	87.906	ENSMLEG00000034004	SNRNP48	100	88.791	Mandrillus_leucophaeus
ENSCGRG00001001076	-	77	48.289	ENSMAMG00000018673	snrnp48	83	43.642	Mastacembelus_armatus
ENSCGRG00001001076	-	82	64.286	ENSMGAG00000006037	SNRNP48	99	65.068	Meleagris_gallopavo
ENSCGRG00001001076	-	100	97.033	ENSMAUG00000011944	Snrnp48	100	97.033	Mesocricetus_auratus
ENSCGRG00001001076	-	100	87.021	ENSMICG00000012497	SNRNP48	100	87.906	Microcebus_murinus
ENSCGRG00001001076	-	100	95.846	ENSMOCG00000015555	Snrnp48	100	95.846	Microtus_ochrogaster
ENSCGRG00001001076	-	54	52.973	ENSMMOG00000003072	-	58	52.973	Mola_mola
ENSCGRG00001001076	-	99	69.565	ENSMODG00000009996	SNRNP48	93	69.855	Monodelphis_domestica
ENSCGRG00001001076	-	75	49.606	ENSMALG00000005725	snrnp48	95	42.308	Monopterus_albus
ENSCGRG00001001076	-	100	94.065	MGP_CAROLIEiJ_G0018441	Snrnp48	100	94.065	Mus_caroli
ENSCGRG00001001076	-	100	93.769	ENSMUSG00000021431	Snrnp48	100	93.769	Mus_musculus
ENSCGRG00001001076	-	100	94.659	MGP_PahariEiJ_G0019509	Snrnp48	100	94.659	Mus_pahari
ENSCGRG00001001076	-	100	93.472	MGP_SPRETEiJ_G0019321	Snrnp48	100	93.472	Mus_spretus
ENSCGRG00001001076	-	99	91.124	ENSNGAG00000004849	Snrnp48	99	91.124	Nannospalax_galili
ENSCGRG00001001076	-	75	46.875	ENSNBRG00000012127	snrnp48	95	41.520	Neolamprologus_brichardi
ENSCGRG00001001076	-	100	87.906	ENSNLEG00000011667	SNRNP48	100	88.791	Nomascus_leucogenys
ENSCGRG00001001076	-	95	78.328	ENSOPRG00000015471	SNRNP48	100	78.019	Ochotona_princeps
ENSCGRG00001001076	-	96	43.769	ENSONIG00000001520	snrnp48	95	41.026	Oreochromis_niloticus
ENSCGRG00001001076	-	63	59.162	ENSOANG00000019888	-	100	62.981	Ornithorhynchus_anatinus
ENSCGRG00001001076	-	85	87.762	ENSOCUG00000005168	SNRNP48	100	87.500	Oryctolagus_cuniculus
ENSCGRG00001001076	-	97	44.543	ENSORLG00000015654	snrnp48	96	44.575	Oryzias_latipes
ENSCGRG00001001076	-	89	46.429	ENSORLG00020015976	snrnp48	82	44.282	Oryzias_latipes_hni
ENSCGRG00001001076	-	97	44.838	ENSORLG00015022379	snrnp48	82	45.161	Oryzias_latipes_hsok
ENSCGRG00001001076	-	96	44.109	ENSOMEG00000022007	snrnp48	95	44.058	Oryzias_melastigma
ENSCGRG00001001076	-	91	87.255	ENSOGAG00000005275	SNRNP48	96	87.066	Otolemur_garnettii
ENSCGRG00001001076	-	85	85.017	ENSOARG00000017319	SNRNP48	100	85.017	Ovis_aries
ENSCGRG00001001076	-	100	87.906	ENSPPAG00000032873	SNRNP48	100	88.791	Pan_paniscus
ENSCGRG00001001076	-	100	87.906	ENSPPRG00000004283	SNRNP48	100	88.201	Panthera_pardus
ENSCGRG00001001076	-	85	88.502	ENSPTIG00000013502	SNRNP48	100	88.850	Panthera_tigris_altaica
ENSCGRG00001001076	-	100	87.906	ENSPTRG00000017703	SNRNP48	100	88.791	Pan_troglodytes
ENSCGRG00001001076	-	100	87.906	ENSPANG00000000771	SNRNP48	100	88.791	Papio_anubis
ENSCGRG00001001076	-	94	45.481	ENSPKIG00000013703	snrnp48	59	49.474	Paramormyrops_kingsleyae
ENSCGRG00001001076	-	84	63.455	ENSPSIG00000002213	SNRNP48	94	63.545	Pelodiscus_sinensis
ENSCGRG00001001076	-	75	48.649	ENSPMGG00000008120	snrnp48	90	48.649	Periophthalmus_magnuspinnatus
ENSCGRG00001001076	-	100	97.329	ENSPEMG00000008872	Snrnp48	100	98.947	Peromyscus_maniculatus_bairdii
ENSCGRG00001001076	-	75	50.000	ENSPFOG00000003578	snrnp48	93	44.543	Poecilia_formosa
ENSCGRG00001001076	-	95	32.509	ENSPLAG00000002290	snrnp48	79	49.573	Poecilia_latipinna
ENSCGRG00001001076	-	75	49.609	ENSPMEG00000018033	snrnp48	93	44.248	Poecilia_mexicana
ENSCGRG00001001076	-	74	50.199	ENSPREG00000018541	snrnp48	93	45.266	Poecilia_reticulata
ENSCGRG00001001076	-	100	86.726	ENSPPYG00000016209	SNRNP48	100	87.611	Pongo_abelii
ENSCGRG00001001076	-	79	68.539	ENSPCAG00000011991	SNRNP48	99	68.539	Procavia_capensis
ENSCGRG00001001076	-	100	86.136	ENSPVAG00000002854	SNRNP48	100	86.431	Pteropus_vampyrus
ENSCGRG00001001076	-	75	47.266	ENSPNYG00000015399	snrnp48	90	45.329	Pundamilia_nyererei
ENSCGRG00001001076	-	100	94.065	ENSRNOG00000013756	Snrnp48	100	94.065	Rattus_norvegicus
ENSCGRG00001001076	-	92	88.065	ENSRBIG00000043856	SNRNP48	98	88.065	Rhinopithecus_bieti
ENSCGRG00001001076	-	100	87.611	ENSRROG00000043229	SNRNP48	100	88.496	Rhinopithecus_roxellana
ENSCGRG00001001076	-	100	87.611	ENSSBOG00000019486	SNRNP48	100	88.496	Saimiri_boliviensis_boliviensis
ENSCGRG00001001076	-	99	71.060	ENSSHAG00000014483	SNRNP48	100	71.060	Sarcophilus_harrisii
ENSCGRG00001001076	-	74	50.781	ENSSFOG00015006610	snrnp48	70	48.161	Scleropages_formosus
ENSCGRG00001001076	-	85	46.341	ENSSDUG00000014953	snrnp48	92	43.072	Seriola_dumerili
ENSCGRG00001001076	-	85	46.416	ENSSLDG00000005989	snrnp48	92	43.675	Seriola_lalandi_dorsalis
ENSCGRG00001001076	-	86	63.487	ENSSPUG00000006257	SNRNP48	86	65.132	Sphenodon_punctatus
ENSCGRG00001001076	-	96	42.342	ENSSPAG00000006454	snrnp48	93	43.491	Stegastes_partitus
ENSCGRG00001001076	-	83	63.230	ENSTGUG00000007575	SNRNP48	93	63.230	Taeniopygia_guttata
ENSCGRG00001001076	-	74	49.402	ENSTRUG00000007031	snrnp48	92	45.482	Takifugu_rubripes
ENSCGRG00001001076	-	75	45.490	ENSTNIG00000012977	-	76	45.312	Tetraodon_nigroviridis
ENSCGRG00001001076	-	100	72.485	ENSTBEG00000015620	SNRNP48	100	72.485	Tupaia_belangeri
ENSCGRG00001001076	-	100	86.136	ENSTTRG00000016715	SNRNP48	100	86.136	Tursiops_truncatus
ENSCGRG00001001076	-	100	87.611	ENSUAMG00000003690	SNRNP48	100	87.611	Ursus_americanus
ENSCGRG00001001076	-	85	84.321	ENSVPAG00000003557	SNRNP48	100	84.321	Vicugna_pacos
ENSCGRG00001001076	-	99	87.834	ENSVVUG00000004996	SNRNP48	99	88.131	Vulpes_vulpes
ENSCGRG00001001076	-	86	52.349	ENSXETG00000020447	snrnp48	97	50.595	Xenopus_tropicalis
ENSCGRG00001001076	-	69	49.787	ENSXCOG00000004478	snrnp48	71	49.787	Xiphophorus_couchianus
ENSCGRG00001001076	-	84	48.592	ENSXMAG00000013595	snrnp48	93	45.428	Xiphophorus_maculatus