EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00001001739 (Gene tree)
Gene ID: -
Gene Symbol: Trmu
Alias: 1110005N20Rik|1600025P05Rik|Trmt1
Full Name: tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 14679 bases
Position: chrscaffold_0:145905722-145920400
Accession: 100759274
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001001826	tRNA_Me_trans	PF03054.16	7.7e-141	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001002181	-	3556	-	ENSCGRP00001001826	419 (aa)	XP_007619206	UPI0004543E64

Gene Model

Click here to download ENSCGRG00001001739's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001001739's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001001739	Trmu	99	89.737	ENSG00000100416	TRMU	100	92.000	Homo_sapiens
ENSCGRG00001001739	Trmu	99	68.510	ENSAPOG00000014458	trmu	99	68.510	Acanthochromis_polyacanthus
ENSCGRG00001001739	Trmu	99	89.928	ENSAMEG00000003319	TRMU	100	89.928	Ailuropoda_melanoleuca
ENSCGRG00001001739	Trmu	96	68.238	ENSACIG00000002101	trmu	97	68.238	Amphilophus_citrinellus
ENSCGRG00001001739	Trmu	99	68.990	ENSAOCG00000013155	trmu	99	68.990	Amphiprion_ocellaris
ENSCGRG00001001739	Trmu	99	68.510	ENSAPEG00000013350	trmu	99	68.510	Amphiprion_percula
ENSCGRG00001001739	Trmu	97	68.127	ENSATEG00000007814	trmu	100	68.127	Anabas_testudineus
ENSCGRG00001001739	Trmu	91	78.329	ENSAPLG00000016380	TRMU	98	78.329	Anas_platyrhynchos
ENSCGRG00001001739	Trmu	99	77.349	ENSACAG00000007720	TRMU	99	77.349	Anolis_carolinensis
ENSCGRG00001001739	Trmu	98	88.564	ENSANAG00000038053	TRMU	97	88.564	Aotus_nancymaae
ENSCGRG00001001739	Trmu	96	69.727	ENSACLG00000005395	trmu	98	69.648	Astatotilapia_calliptera
ENSCGRG00001001739	Trmu	97	70.833	ENSAMXG00000005282	trmu	99	70.833	Astyanax_mexicanus
ENSCGRG00001001739	Trmu	99	88.729	ENSBTAG00000005595	TRMU	100	88.729	Bos_taurus
ENSCGRG00001001739	Trmu	91	39.691	WBGene00007114	mttu-1	98	39.691	Caenorhabditis_elegans
ENSCGRG00001001739	Trmu	99	86.747	ENSCJAG00000000198	TRMU	99	86.747	Callithrix_jacchus
ENSCGRG00001001739	Trmu	98	91.484	ENSCAFG00000000779	TRMU	98	90.843	Canis_familiaris
ENSCGRG00001001739	Trmu	98	91.484	ENSCAFG00020009184	TRMU	98	90.843	Canis_lupus_dingo
ENSCGRG00001001739	Trmu	99	89.831	ENSCHIG00000017074	TRMU	99	89.423	Capra_hircus
ENSCGRG00001001739	Trmu	99	88.702	ENSTSYG00000003853	TRMU	99	88.702	Carlito_syrichta
ENSCGRG00001001739	Trmu	96	83.059	ENSCAPG00000013034	TRMU	99	83.059	Cavia_aperea
ENSCGRG00001001739	Trmu	99	88.124	ENSCPOG00000020780	TRMU	100	88.124	Cavia_porcellus
ENSCGRG00001001739	Trmu	99	87.381	ENSCCAG00000021641	TRMU	99	87.381	Cebus_capucinus
ENSCGRG00001001739	Trmu	99	87.648	ENSCATG00000032800	TRMU	100	87.648	Cercocebus_atys
ENSCGRG00001001739	Trmu	99	90.261	ENSCLAG00000017269	TRMU	100	90.261	Chinchilla_lanigera
ENSCGRG00001001739	Trmu	99	88.361	ENSCSAG00000005279	TRMU	100	88.361	Chlorocebus_sabaeus
ENSCGRG00001001739	Trmu	89	80.481	ENSCPBG00000011621	TRMU	94	80.481	Chrysemys_picta_bellii
ENSCGRG00001001739	Trmu	93	46.939	ENSCING00000019371	-	96	46.939	Ciona_intestinalis
ENSCGRG00001001739	Trmu	99	87.886	ENSCANG00000041645	TRMU	100	87.886	Colobus_angolensis_palliatus
ENSCGRG00001001739	Trmu	99	91.847	ENSCGRG00000002781	Trmu	100	91.847	Cricetulus_griseus_crigri
ENSCGRG00001001739	Trmu	99	65.865	ENSCSEG00000012382	trmu	99	65.865	Cynoglossus_semilaevis
ENSCGRG00001001739	Trmu	99	68.916	ENSCVAG00000001366	trmu	99	68.916	Cyprinodon_variegatus
ENSCGRG00001001739	Trmu	99	66.667	ENSDARG00000043734	trmu	99	66.667	Danio_rerio
ENSCGRG00001001739	Trmu	54	82.819	ENSDNOG00000047245	-	83	80.083	Dasypus_novemcinctus
ENSCGRG00001001739	Trmu	98	88.564	ENSDORG00000007455	Trmu	100	88.564	Dipodomys_ordii
ENSCGRG00001001739	Trmu	89	42.359	FBgn0040337	CG3021	95	42.857	Drosophila_melanogaster
ENSCGRG00001001739	Trmu	95	52.736	ENSEBUG00000007454	trmu	99	52.736	Eptatretus_burgeri
ENSCGRG00001001739	Trmu	98	91.443	ENSEASG00005021725	TRMU	99	90.843	Equus_asinus_asinus
ENSCGRG00001001739	Trmu	98	91.220	ENSECAG00000000467	TRMU	99	90.625	Equus_caballus
ENSCGRG00001001739	Trmu	71	68.350	ENSEEUG00000000074	-	77	88.889	Erinaceus_europaeus
ENSCGRG00001001739	Trmu	98	65.777	ENSELUG00000009464	trmu	99	67.120	Esox_lucius
ENSCGRG00001001739	Trmu	98	90.220	ENSFCAG00000006533	TRMU	99	89.639	Felis_catus
ENSCGRG00001001739	Trmu	89	78.158	ENSFALG00000010035	TRMU	96	78.158	Ficedula_albicollis
ENSCGRG00001001739	Trmu	93	88.550	ENSFDAG00000017472	TRMU	100	88.550	Fukomys_damarensis
ENSCGRG00001001739	Trmu	99	68.916	ENSFHEG00000003162	trmu	98	70.300	Fundulus_heteroclitus
ENSCGRG00001001739	Trmu	96	62.162	ENSGMOG00000001323	trmu	100	62.162	Gadus_morhua
ENSCGRG00001001739	Trmu	95	77.887	ENSGALG00000031922	TRMU	96	77.887	Gallus_gallus
ENSCGRG00001001739	Trmu	95	71.429	ENSGAFG00000013331	trmu	96	71.429	Gambusia_affinis
ENSCGRG00001001739	Trmu	98	65.632	ENSGACG00000019024	trmu	99	65.632	Gasterosteus_aculeatus
ENSCGRG00001001739	Trmu	99	89.260	ENSGGOG00000000203	TRMU	99	89.260	Gorilla_gorilla
ENSCGRG00001001739	Trmu	96	69.231	ENSHBUG00000023421	trmu	98	69.106	Haplochromis_burtoni
ENSCGRG00001001739	Trmu	99	88.361	ENSHGLG00000009278	TRMU	100	88.361	Heterocephalus_glaber_female
ENSCGRG00001001739	Trmu	99	88.361	ENSHGLG00100018863	TRMU	100	88.361	Heterocephalus_glaber_male
ENSCGRG00001001739	Trmu	95	71.285	ENSHCOG00000013459	trmu	96	71.285	Hippocampus_comes
ENSCGRG00001001739	Trmu	97	68.627	ENSIPUG00000009785	trmu	100	68.627	Ictalurus_punctatus
ENSCGRG00001001739	Trmu	99	91.367	ENSSTOG00000010993	TRMU	99	91.367	Ictidomys_tridecemlineatus
ENSCGRG00001001739	Trmu	99	92.566	ENSJJAG00000000667	Trmu	100	92.566	Jaculus_jaculus
ENSCGRG00001001739	Trmu	99	67.866	ENSKMAG00000008516	trmu	99	67.866	Kryptolebias_marmoratus
ENSCGRG00001001739	Trmu	97	68.395	ENSLBEG00000018831	trmu	97	68.395	Labrus_bergylta
ENSCGRG00001001739	Trmu	97	74.138	ENSLACG00000013713	TRMU	97	74.138	Latimeria_chalumnae
ENSCGRG00001001739	Trmu	95	73.183	ENSLOCG00000016066	trmu	95	73.183	Lepisosteus_oculatus
ENSCGRG00001001739	Trmu	99	75.000	ENSLAFG00000005129	TRMU	100	75.000	Loxodonta_africana
ENSCGRG00001001739	Trmu	99	88.361	ENSMFAG00000039767	TRMU	100	88.361	Macaca_fascicularis
ENSCGRG00001001739	Trmu	99	88.361	ENSMMUG00000000807	TRMU	100	88.361	Macaca_mulatta
ENSCGRG00001001739	Trmu	99	88.361	ENSMNEG00000028164	TRMU	100	88.361	Macaca_nemestrina
ENSCGRG00001001739	Trmu	99	87.886	ENSMLEG00000033884	TRMU	100	87.886	Mandrillus_leucophaeus
ENSCGRG00001001739	Trmu	98	68.204	ENSMAMG00000004717	trmu	99	68.204	Mastacembelus_armatus
ENSCGRG00001001739	Trmu	96	69.727	ENSMZEG00005015797	trmu	97	69.727	Maylandia_zebra
ENSCGRG00001001739	Trmu	76	76.687	ENSMGAG00000007550	TRMU	95	76.687	Meleagris_gallopavo
ENSCGRG00001001739	Trmu	99	98.321	ENSMAUG00000022282	Trmu	100	98.321	Mesocricetus_auratus
ENSCGRG00001001739	Trmu	99	90.799	ENSMICG00000029046	TRMU	100	90.799	Microcebus_murinus
ENSCGRG00001001739	Trmu	99	96.403	ENSMOCG00000014641	Trmu	100	96.403	Microtus_ochrogaster
ENSCGRG00001001739	Trmu	96	68.734	ENSMMOG00000007229	trmu	97	68.734	Mola_mola
ENSCGRG00001001739	Trmu	98	78.019	ENSMODG00000007433	TRMU	96	78.019	Monodelphis_domestica
ENSCGRG00001001739	Trmu	97	66.106	ENSMALG00000007721	trmu	100	66.106	Monopterus_albus
ENSCGRG00001001739	Trmu	99	94.952	MGP_CAROLIEiJ_G0020134	Trmu	99	94.952	Mus_caroli
ENSCGRG00001001739	Trmu	99	95.913	ENSMUSG00000022386	Trmu	99	95.913	Mus_musculus
ENSCGRG00001001739	Trmu	99	95.673	MGP_PahariEiJ_G0020139	Trmu	99	95.673	Mus_pahari
ENSCGRG00001001739	Trmu	99	95.913	MGP_SPRETEiJ_G0021031	Trmu	99	95.913	Mus_spretus
ENSCGRG00001001739	Trmu	99	89.157	ENSMPUG00000002523	TRMU	99	89.157	Mustela_putorius_furo
ENSCGRG00001001739	Trmu	99	93.494	ENSNGAG00000005132	Trmu	99	93.494	Nannospalax_galili
ENSCGRG00001001739	Trmu	97	69.383	ENSNBRG00000022690	trmu	99	69.383	Neolamprologus_brichardi
ENSCGRG00001001739	Trmu	99	87.828	ENSNLEG00000015773	TRMU	99	87.828	Nomascus_leucogenys
ENSCGRG00001001739	Trmu	78	70.427	ENSMEUG00000000216	TRMU	99	70.427	Notamacropus_eugenii
ENSCGRG00001001739	Trmu	99	89.737	ENSODEG00000014745	TRMU	100	89.737	Octodon_degus
ENSCGRG00001001739	Trmu	96	69.479	ENSONIG00000009821	trmu	97	69.479	Oreochromis_niloticus
ENSCGRG00001001739	Trmu	91	77.662	ENSOANG00000001891	TRMU	97	77.662	Ornithorhynchus_anatinus
ENSCGRG00001001739	Trmu	93	90.256	ENSOCUG00000003664	TRMU	98	88.480	Oryctolagus_cuniculus
ENSCGRG00001001739	Trmu	97	66.586	ENSORLG00000019015	trmu	99	66.586	Oryzias_latipes
ENSCGRG00001001739	Trmu	97	66.344	ENSORLG00020006830	trmu	99	66.344	Oryzias_latipes_hni
ENSCGRG00001001739	Trmu	97	66.344	ENSORLG00015003907	trmu	99	66.344	Oryzias_latipes_hsok
ENSCGRG00001001739	Trmu	57	64.583	ENSOMEG00000015541	trmu	86	64.583	Oryzias_melastigma
ENSCGRG00001001739	Trmu	99	88.729	ENSOGAG00000008096	TRMU	100	88.729	Otolemur_garnettii
ENSCGRG00001001739	Trmu	99	80.288	ENSOARG00000019475	TRMU	99	80.288	Ovis_aries
ENSCGRG00001001739	Trmu	99	89.260	ENSPPAG00000033944	TRMU	99	89.260	Pan_paniscus
ENSCGRG00001001739	Trmu	97	90.617	ENSPPRG00000004197	TRMU	99	89.639	Panthera_pardus
ENSCGRG00001001739	Trmu	64	90.706	ENSPTIG00000014122	TRMU	98	90.602	Panthera_tigris_altaica
ENSCGRG00001001739	Trmu	99	89.260	ENSPTRG00000014510	TRMU	99	89.260	Pan_troglodytes
ENSCGRG00001001739	Trmu	94	90.886	ENSPANG00000023074	TRMU	96	88.089	Papio_anubis
ENSCGRG00001001739	Trmu	97	67.874	ENSPKIG00000002849	trmu	100	67.874	Paramormyrops_kingsleyae
ENSCGRG00001001739	Trmu	89	79.679	ENSPSIG00000013020	TRMU	98	79.679	Pelodiscus_sinensis
ENSCGRG00001001739	Trmu	98	69.756	ENSPMGG00000004083	trmu	99	69.756	Periophthalmus_magnuspinnatus
ENSCGRG00001001739	Trmu	99	97.122	ENSPEMG00000014007	Trmu	100	97.122	Peromyscus_maniculatus_bairdii
ENSCGRG00001001739	Trmu	95	78.697	ENSPCIG00000009923	TRMU	97	76.867	Phascolarctos_cinereus
ENSCGRG00001001739	Trmu	94	68.342	ENSPFOG00000008197	trmu	89	68.342	Poecilia_formosa
ENSCGRG00001001739	Trmu	98	70.316	ENSPLAG00000008414	trmu	99	70.316	Poecilia_latipinna
ENSCGRG00001001739	Trmu	98	70.560	ENSPMEG00000004326	trmu	99	70.560	Poecilia_mexicana
ENSCGRG00001001739	Trmu	98	70.316	ENSPREG00000007980	trmu	99	70.316	Poecilia_reticulata
ENSCGRG00001001739	Trmu	99	89.499	ENSPPYG00000011949	TRMU	99	89.499	Pongo_abelii
ENSCGRG00001001739	Trmu	93	79.177	ENSPCAG00000013462	TRMU	100	79.177	Procavia_capensis
ENSCGRG00001001739	Trmu	99	90.385	ENSPCOG00000016539	TRMU	99	90.385	Propithecus_coquereli
ENSCGRG00001001739	Trmu	97	81.481	ENSPVAG00000013202	TRMU	99	80.529	Pteropus_vampyrus
ENSCGRG00001001739	Trmu	96	69.231	ENSPNYG00000005629	trmu	97	69.231	Pundamilia_nyererei
ENSCGRG00001001739	Trmu	98	69.268	ENSPNAG00000006339	trmu	96	69.268	Pygocentrus_nattereri
ENSCGRG00001001739	Trmu	99	96.394	ENSRNOG00000016465	Trmu	99	96.394	Rattus_norvegicus
ENSCGRG00001001739	Trmu	99	87.648	ENSRBIG00000038973	TRMU	100	87.648	Rhinopithecus_bieti
ENSCGRG00001001739	Trmu	99	87.886	ENSRROG00000004267	TRMU	100	87.886	Rhinopithecus_roxellana
ENSCGRG00001001739	Trmu	90	30.923	YDL033C	SLM3	91	30.923	Saccharomyces_cerevisiae
ENSCGRG00001001739	Trmu	99	88.675	ENSSBOG00000030184	TRMU	99	88.675	Saimiri_boliviensis_boliviensis
ENSCGRG00001001739	Trmu	89	68.182	ENSSFOG00015020664	trmu	98	68.182	Scleropages_formosus
ENSCGRG00001001739	Trmu	96	68.486	ENSSMAG00000019450	trmu	97	68.486	Scophthalmus_maximus
ENSCGRG00001001739	Trmu	97	69.383	ENSSDUG00000011913	trmu	97	69.383	Seriola_dumerili
ENSCGRG00001001739	Trmu	97	69.630	ENSSLDG00000011684	trmu	97	69.630	Seriola_lalandi_dorsalis
ENSCGRG00001001739	Trmu	98	67.397	ENSSPUG00000017123	TRMU	98	67.397	Sphenodon_punctatus
ENSCGRG00001001739	Trmu	99	68.510	ENSSPAG00000021875	trmu	99	68.510	Stegastes_partitus
ENSCGRG00001001739	Trmu	97	89.216	ENSSSCG00000000007	TRMU	99	88.010	Sus_scrofa
ENSCGRG00001001739	Trmu	89	78.820	ENSTGUG00000003663	-	100	78.820	Taeniopygia_guttata
ENSCGRG00001001739	Trmu	96	70.720	ENSTRUG00000001231	trmu	98	70.720	Takifugu_rubripes
ENSCGRG00001001739	Trmu	96	70.864	ENSTNIG00000010484	trmu	96	70.864	Tetraodon_nigroviridis
ENSCGRG00001001739	Trmu	92	54.780	ENSTBEG00000011276	-	99	54.780	Tupaia_belangeri
ENSCGRG00001001739	Trmu	99	89.286	ENSTTRG00000004160	TRMU	99	89.286	Tursiops_truncatus
ENSCGRG00001001739	Trmu	69	91.753	ENSUAMG00000024825	TRMU	97	91.753	Ursus_americanus
ENSCGRG00001001739	Trmu	98	74.939	ENSUMAG00000019079	TRMU	97	91.440	Ursus_maritimus
ENSCGRG00001001739	Trmu	52	78.539	ENSVPAG00000000685	-	100	78.539	Vicugna_pacos
ENSCGRG00001001739	Trmu	99	90.361	ENSVVUG00000024963	TRMU	99	90.361	Vulpes_vulpes
ENSCGRG00001001739	Trmu	98	73.236	ENSXETG00000023304	trmu	96	73.236	Xenopus_tropicalis
ENSCGRG00001001739	Trmu	95	69.307	ENSXCOG00000015105	trmu	96	69.307	Xiphophorus_couchianus
ENSCGRG00001001739	Trmu	95	71.429	ENSXMAG00000006697	trmu	96	71.429	Xiphophorus_maculatus