EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00001002254 (Gene tree)
Gene ID: -
Gene Symbol: Safb
Alias: 3110021E02Rik|5330423C17Rik|SAFB1
Full Name: scaffold attachment factor B
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 26679 bases
Position: chrscaffold_1:96369292-96395970
Accession: 2146974
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001002190	RRM_5	PF13893.6	3.2e-06	1	1
ENSCGRP00001002195	RRM_5	PF13893.6	3.2e-06	1	1
ENSCGRP00001002177	RRM_5	PF13893.6	3.3e-06	1	1
ENSCGRP00001002195	RRM_1	PF00076.22	1.5e-12	1	1
ENSCGRP00001002177	RRM_1	PF00076.22	1.5e-12	1	1
ENSCGRP00001002190	RRM_1	PF00076.22	1.5e-12	1	1
ENSCGRP00001002177	SAP	PF02037.27	8.3e-11	1	1
ENSCGRP00001002195	SAP	PF02037.27	9.6e-11	1	1
ENSCGRP00001002190	SAP	PF02037.27	8.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001002814	-	2787	-	ENSCGRP00001002195	928 (aa)	-	-
ENSCGRT00001002806	-	2796	-	ENSCGRP00001002190	931 (aa)	-	-
ENSCGRT00001002784	-	6750	-	ENSCGRP00001002177	936 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001002254's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001002254's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001002254	Safb	100	83.582	ENSG00000160633	SAFB	100	83.493	Homo_sapiens
ENSCGRG00001002254	Safb	90	44.255	ENSAPOG00000022508	safb	64	43.408	Acanthochromis_polyacanthus
ENSCGRG00001002254	Safb	100	82.997	ENSAMEG00000012254	SAFB	98	82.770	Ailuropoda_melanoleuca
ENSCGRG00001002254	Safb	94	39.068	ENSACIG00000006247	safb	52	53.333	Amphilophus_citrinellus
ENSCGRG00001002254	Safb	93	43.440	ENSAOCG00000006308	safb	67	42.215	Amphiprion_ocellaris
ENSCGRG00001002254	Safb	95	40.642	ENSATEG00000004998	safb	64	40.605	Anabas_testudineus
ENSCGRG00001002254	Safb	91	58.068	ENSAPLG00000006355	-	65	53.299	Anas_platyrhynchos
ENSCGRG00001002254	Safb	94	61.305	ENSAPLG00000005780	-	100	59.685	Anas_platyrhynchos
ENSCGRG00001002254	Safb	100	83.600	ENSANAG00000028821	SAFB	100	83.600	Aotus_nancymaae
ENSCGRG00001002254	Safb	100	80.298	ENSBTAG00000007875	SAFB	100	80.298	Bos_taurus
ENSCGRG00001002254	Safb	81	87.114	ENSCJAG00000017081	SAFB	100	90.520	Callithrix_jacchus
ENSCGRG00001002254	Safb	100	84.632	ENSCAFG00000018803	SAFB	87	84.632	Canis_familiaris
ENSCGRG00001002254	Safb	100	84.632	ENSCAFG00020018943	SAFB	100	84.632	Canis_lupus_dingo
ENSCGRG00001002254	Safb	100	79.766	ENSCHIG00000007262	SAFB	100	79.766	Capra_hircus
ENSCGRG00001002254	Safb	58	75.655	ENSTSYG00000001851	-	100	72.661	Carlito_syrichta
ENSCGRG00001002254	Safb	93	80.402	ENSCAPG00000012121	SAFB	100	80.200	Cavia_aperea
ENSCGRG00001002254	Safb	100	84.778	ENSCPOG00000026322	SAFB	100	84.567	Cavia_porcellus
ENSCGRG00001002254	Safb	100	83.511	ENSCCAG00000020193	SAFB	100	83.404	Cebus_capucinus
ENSCGRG00001002254	Safb	100	83.387	ENSCATG00000029994	SAFB	100	83.387	Cercocebus_atys
ENSCGRG00001002254	Safb	100	84.110	ENSCLAG00000007734	SAFB	100	85.381	Chinchilla_lanigera
ENSCGRG00001002254	Safb	100	83.280	ENSCSAG00000009949	SAFB	100	83.280	Chlorocebus_sabaeus
ENSCGRG00001002254	Safb	87	97.619	ENSCHOG00000003208	SAFB	93	97.619	Choloepus_hoffmanni
ENSCGRG00001002254	Safb	93	55.471	ENSCPBG00000010936	-	63	54.422	Chrysemys_picta_bellii
ENSCGRG00001002254	Safb	93	58.977	ENSCPBG00000010928	-	63	55.755	Chrysemys_picta_bellii
ENSCGRG00001002254	Safb	100	92.040	ENSCANG00000004774	-	99	92.040	Colobus_angolensis_palliatus
ENSCGRG00001002254	Safb	100	78.549	ENSCANG00000019754	-	100	78.549	Colobus_angolensis_palliatus
ENSCGRG00001002254	Safb	97	97.121	ENSCGRG00000011529	Safb	99	97.121	Cricetulus_griseus_crigri
ENSCGRG00001002254	Safb	94	40.385	ENSCSEG00000019870	safb	65	38.245	Cynoglossus_semilaevis
ENSCGRG00001002254	Safb	89	42.209	ENSDARG00000020467	safb	59	62.393	Danio_rerio
ENSCGRG00001002254	Safb	100	82.428	ENSDNOG00000015746	SAFB	95	81.065	Dasypus_novemcinctus
ENSCGRG00001002254	Safb	100	79.852	ENSDORG00000016200	Safb	100	79.579	Dipodomys_ordii
ENSCGRG00001002254	Safb	76	86.232	ENSETEG00000018679	SAFB	77	86.232	Echinops_telfairi
ENSCGRG00001002254	Safb	100	82.309	ENSEASG00005023019	SAFB	100	81.780	Equus_asinus_asinus
ENSCGRG00001002254	Safb	100	84.435	ENSECAG00000018659	SAFB	89	84.435	Equus_caballus
ENSCGRG00001002254	Safb	96	40.899	ENSELUG00000022327	safb	57	58.065	Esox_lucius
ENSCGRG00001002254	Safb	100	84.435	ENSFCAG00000011835	SAFB	100	84.435	Felis_catus
ENSCGRG00001002254	Safb	93	53.645	ENSFALG00000013881	-	64	54.530	Ficedula_albicollis
ENSCGRG00001002254	Safb	100	61.870	ENSFALG00000013882	-	89	61.189	Ficedula_albicollis
ENSCGRG00001002254	Safb	100	77.000	ENSFDAG00000020306	SAFB	99	81.847	Fukomys_damarensis
ENSCGRG00001002254	Safb	100	61.789	ENSGALG00000013365	-	97	60.997	Gallus_gallus
ENSCGRG00001002254	Safb	95	42.842	ENSGACG00000011385	safb	64	38.769	Gasterosteus_aculeatus
ENSCGRG00001002254	Safb	96	59.263	ENSGAGG00000008424	-	67	56.347	Gopherus_agassizii
ENSCGRG00001002254	Safb	100	83.280	ENSGGOG00000015109	SAFB	100	83.280	Gorilla_gorilla
ENSCGRG00001002254	Safb	95	38.343	ENSHBUG00000009218	safb	67	41.128	Haplochromis_burtoni
ENSCGRG00001002254	Safb	100	86.581	ENSHGLG00000015883	SAFB	100	86.581	Heterocephalus_glaber_female
ENSCGRG00001002254	Safb	56	53.160	ENSIPUG00000024869	safb2	63	45.663	Ictalurus_punctatus
ENSCGRG00001002254	Safb	93	87.314	ENSSTOG00000002783	SAFB	100	87.314	Ictidomys_tridecemlineatus
ENSCGRG00001002254	Safb	100	87.500	ENSJJAG00000009021	Safb	98	88.587	Jaculus_jaculus
ENSCGRG00001002254	Safb	95	39.958	ENSLBEG00000006015	safb	63	42.165	Labrus_bergylta
ENSCGRG00001002254	Safb	65	48.148	ENSLACG00000018090	SAFB	66	49.454	Latimeria_chalumnae
ENSCGRG00001002254	Safb	97	45.360	ENSLOCG00000003613	safb	73	45.205	Lepisosteus_oculatus
ENSCGRG00001002254	Safb	99	81.731	ENSLAFG00000003840	SAFB	100	80.662	Loxodonta_africana
ENSCGRG00001002254	Safb	100	83.298	ENSMFAG00000003885	SAFB	100	83.191	Macaca_fascicularis
ENSCGRG00001002254	Safb	100	83.387	ENSMMUG00000017970	SAFB	100	83.387	Macaca_mulatta
ENSCGRG00001002254	Safb	100	79.894	ENSMNEG00000035637	SAFB	100	79.318	Macaca_nemestrina
ENSCGRG00001002254	Safb	100	78.155	ENSMLEG00000038637	SAFB	100	76.810	Mandrillus_leucophaeus
ENSCGRG00001002254	Safb	95	40.149	ENSMAMG00000003357	safb	59	40.385	Mastacembelus_armatus
ENSCGRG00001002254	Safb	82	59.350	ENSMZEG00005009120	safb	52	58.871	Maylandia_zebra
ENSCGRG00001002254	Safb	97	59.739	ENSMGAG00000001101	-	100	58.388	Meleagris_gallopavo
ENSCGRG00001002254	Safb	89	56.975	ENSMGAG00000001051	-	97	58.745	Meleagris_gallopavo
ENSCGRG00001002254	Safb	52	99.383	ENSMAUG00000005013	Safb	100	99.383	Mesocricetus_auratus
ENSCGRG00001002254	Safb	100	80.532	ENSMICG00000008739	-	100	79.787	Microcebus_murinus
ENSCGRG00001002254	Safb	85	70.574	ENSMICG00000046795	-	98	85.106	Microcebus_murinus
ENSCGRG00001002254	Safb	100	96.170	ENSMOCG00000014040	Safb	100	96.170	Microtus_ochrogaster
ENSCGRG00001002254	Safb	100	69.199	ENSMODG00000001236	SAFB	98	69.797	Monodelphis_domestica
ENSCGRG00001002254	Safb	93	40.794	ENSMALG00000020330	safb	68	40.345	Monopterus_albus
ENSCGRG00001002254	Safb	100	95.527	MGP_CAROLIEiJ_G0021780	Safb	100	95.527	Mus_caroli
ENSCGRG00001002254	Safb	100	94.888	ENSMUSG00000071054	Safb	100	95.421	Mus_musculus
ENSCGRG00001002254	Safb	100	95.638	MGP_PahariEiJ_G0020769	Safb	100	95.532	Mus_pahari
ENSCGRG00001002254	Safb	100	84.026	ENSMPUG00000006123	SAFB	94	84.026	Mustela_putorius_furo
ENSCGRG00001002254	Safb	100	83.280	ENSMLUG00000001081	SAFB	100	83.280	Myotis_lucifugus
ENSCGRG00001002254	Safb	100	87.818	ENSNGAG00000019882	Safb	100	87.818	Nannospalax_galili
ENSCGRG00001002254	Safb	99	80.423	ENSNLEG00000013551	SAFB	99	88.043	Nomascus_leucogenys
ENSCGRG00001002254	Safb	89	79.087	ENSOPRG00000011561	-	100	79.808	Ochotona_princeps
ENSCGRG00001002254	Safb	100	86.547	ENSODEG00000014838	SAFB	100	86.547	Octodon_degus
ENSCGRG00001002254	Safb	95	40.745	ENSONIG00000002318	safb	65	41.827	Oreochromis_niloticus
ENSCGRG00001002254	Safb	93	73.684	ENSOCUG00000014628	SAFB	63	76.697	Oryctolagus_cuniculus
ENSCGRG00001002254	Safb	78	48.767	ENSORLG00020000404	safb	52	54.472	Oryzias_latipes_hni
ENSCGRG00001002254	Safb	100	79.193	ENSOGAG00000027769	SAFB	100	78.919	Otolemur_garnettii
ENSCGRG00001002254	Safb	100	76.890	ENSOARG00000007662	-	100	74.973	Ovis_aries
ENSCGRG00001002254	Safb	79	73.370	ENSOARG00000007856	-	100	73.098	Ovis_aries
ENSCGRG00001002254	Safb	100	83.298	ENSPPAG00000035129	SAFB	100	83.191	Pan_paniscus
ENSCGRG00001002254	Safb	100	84.435	ENSPPRG00000017197	SAFB	100	84.435	Panthera_pardus
ENSCGRG00001002254	Safb	100	83.298	ENSPTRG00000010335	SAFB	100	83.191	Pan_troglodytes
ENSCGRG00001002254	Safb	100	83.191	ENSPANG00000007770	SAFB	100	83.085	Papio_anubis
ENSCGRG00001002254	Safb	99	57.610	ENSPSIG00000009367	-	64	56.000	Pelodiscus_sinensis
ENSCGRG00001002254	Safb	100	57.814	ENSPSIG00000011679	-	64	56.537	Pelodiscus_sinensis
ENSCGRG00001002254	Safb	100	96.802	ENSPEMG00000020428	Safb	100	96.802	Peromyscus_maniculatus_bairdii
ENSCGRG00001002254	Safb	58	78.967	ENSPCIG00000009504	-	100	78.782	Phascolarctos_cinereus
ENSCGRG00001002254	Safb	71	48.408	ENSPFOG00000007745	safb	72	39.423	Poecilia_formosa
ENSCGRG00001002254	Safb	96	36.950	ENSPLAG00000001614	safb	66	39.060	Poecilia_latipinna
ENSCGRG00001002254	Safb	91	42.857	ENSPREG00000012496	safb	65	44.526	Poecilia_reticulata
ENSCGRG00001002254	Safb	100	83.885	ENSPPYG00000009428	SAFB	100	83.885	Pongo_abelii
ENSCGRG00001002254	Safb	100	78.228	ENSPCAG00000006475	SAFB	100	78.549	Procavia_capensis
ENSCGRG00001002254	Safb	100	76.776	ENSPCOG00000014090	SAFB	100	75.227	Propithecus_coquereli
ENSCGRG00001002254	Safb	100	77.399	ENSPVAG00000004913	SAFB	100	77.719	Pteropus_vampyrus
ENSCGRG00001002254	Safb	100	93.737	ENSRNOG00000050543	Safb	100	93.949	Rattus_norvegicus
ENSCGRG00001002254	Safb	100	78.358	ENSRBIG00000042509	SAFB	100	75.540	Rhinopithecus_bieti
ENSCGRG00001002254	Safb	100	83.298	ENSRROG00000029278	SAFB	100	83.191	Rhinopithecus_roxellana
ENSCGRG00001002254	Safb	100	83.600	ENSSBOG00000026291	SAFB	100	83.600	Saimiri_boliviensis_boliviensis
ENSCGRG00001002254	Safb	95	43.189	ENSSFOG00015008156	safb	65	44.849	Scleropages_formosus
ENSCGRG00001002254	Safb	95	40.595	ENSSMAG00000009316	safb	64	42.994	Scophthalmus_maximus
ENSCGRG00001002254	Safb	93	78.311	ENSSARG00000010475	SAFB	100	78.653	Sorex_araneus
ENSCGRG00001002254	Safb	54	49.534	ENSSPUG00000009820	-	64	51.481	Sphenodon_punctatus
ENSCGRG00001002254	Safb	58	50.091	ENSSPUG00000009747	-	67	49.726	Sphenodon_punctatus
ENSCGRG00001002254	Safb	100	83.122	ENSSSCG00000013522	SAFB	99	82.728	Sus_scrofa
ENSCGRG00001002254	Safb	96	60.656	ENSTGUG00000000502	-	98	60.762	Taeniopygia_guttata
ENSCGRG00001002254	Safb	88	42.588	ENSTNIG00000015470	safb	73	38.535	Tetraodon_nigroviridis
ENSCGRG00001002254	Safb	75	86.364	ENSTBEG00000013124	-	66	89.394	Tupaia_belangeri
ENSCGRG00001002254	Safb	93	92.063	ENSTTRG00000013588	SAFB	92	92.063	Tursiops_truncatus
ENSCGRG00001002254	Safb	79	83.924	ENSUAMG00000024543	SAFB	99	84.038	Ursus_americanus
ENSCGRG00001002254	Safb	83	90.780	ENSUMAG00000009734	SAFB	88	90.780	Ursus_maritimus
ENSCGRG00001002254	Safb	73	92.188	ENSVPAG00000012043	SAFB	78	92.188	Vicugna_pacos
ENSCGRG00001002254	Safb	100	84.239	ENSVVUG00000013720	SAFB	87	84.239	Vulpes_vulpes
ENSCGRG00001002254	Safb	67	47.377	ENSXETG00000008755	safb	67	67.391	Xenopus_tropicalis