EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001002297 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 9050 bases
Position: chrscaffold_66:1988870-1997919
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001002184	zf-C2H2	PF00096.26	2.8e-59	1	11
ENSCGRP00001002184	zf-C2H2	PF00096.26	2.8e-59	2	11
ENSCGRP00001002184	zf-C2H2	PF00096.26	2.8e-59	3	11
ENSCGRP00001002184	zf-C2H2	PF00096.26	2.8e-59	4	11
ENSCGRP00001002184	zf-C2H2	PF00096.26	2.8e-59	5	11
ENSCGRP00001002184	zf-C2H2	PF00096.26	2.8e-59	6	11
ENSCGRP00001002184	zf-C2H2	PF00096.26	2.8e-59	7	11
ENSCGRP00001002184	zf-C2H2	PF00096.26	2.8e-59	8	11
ENSCGRP00001002184	zf-C2H2	PF00096.26	2.8e-59	9	11
ENSCGRP00001002184	zf-C2H2	PF00096.26	2.8e-59	10	11
ENSCGRP00001002184	zf-C2H2	PF00096.26	2.8e-59	11	11
ENSCGRP00001002184	zf-met	PF12874.7	4.9e-21	1	3
ENSCGRP00001002184	zf-met	PF12874.7	4.9e-21	2	3
ENSCGRP00001002184	zf-met	PF12874.7	4.9e-21	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001002797	-	1817	-	ENSCGRP00001002184	557 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001002297's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001002297's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001002297	-	98	55.517	ENSCGRG00001012523	-	99	56.906
ENSCGRG00001002297	-	97	40.333	ENSCGRG00001004047	-	64	40.333
ENSCGRG00001002297	-	85	37.153	ENSCGRG00001010581	Prdm5	78	37.153
ENSCGRG00001002297	-	86	36.449	ENSCGRG00001023063	Zfp423	96	36.449
ENSCGRG00001002297	-	100	48.446	ENSCGRG00001007163	-	99	46.457
ENSCGRG00001002297	-	97	38.806	ENSCGRG00001000576	Zfp26	71	38.806
ENSCGRG00001002297	-	99	42.701	ENSCGRG00001013561	Zfp768	61	42.756
ENSCGRG00001002297	-	75	37.662	ENSCGRG00001012398	Zfp236	67	37.662
ENSCGRG00001002297	-	98	42.609	ENSCGRG00001013939	Zfp454	68	42.609
ENSCGRG00001002297	-	88	46.000	ENSCGRG00001019143	-	87	46.000
ENSCGRG00001002297	-	96	38.462	ENSCGRG00001019408	Zbtb17	55	38.462
ENSCGRG00001002297	-	100	42.007	ENSCGRG00001010967	Zfp1	91	42.007
ENSCGRG00001002297	-	94	40.702	ENSCGRG00001010752	2610008E11Rik	76	43.280
ENSCGRG00001002297	-	100	43.207	ENSCGRG00001024303	-	99	42.933
ENSCGRG00001002297	-	97	44.072	ENSCGRG00001017579	Zfp112	61	44.072
ENSCGRG00001002297	-	85	43.590	ENSCGRG00001019468	Zfp628	61	44.156
ENSCGRG00001002297	-	68	34.641	ENSCGRG00001011389	Snai3	62	34.641
ENSCGRG00001002297	-	94	35.967	ENSCGRG00001009557	Zfp319	92	32.780
ENSCGRG00001002297	-	100	45.312	ENSCGRG00001012803	-	86	45.312
ENSCGRG00001002297	-	88	39.418	ENSCGRG00001001639	Zfp882	84	39.418
ENSCGRG00001002297	-	99	42.061	ENSCGRG00001021088	Zfp354a	93	42.061
ENSCGRG00001002297	-	100	46.023	ENSCGRG00001024630	-	90	46.023
ENSCGRG00001002297	-	85	33.865	ENSCGRG00001013598	Zfp865	81	33.730
ENSCGRG00001002297	-	97	45.016	ENSCGRG00001012640	Zfp94	80	45.016
ENSCGRG00001002297	-	97	42.891	ENSCGRG00001023858	Zfp560	67	42.891
ENSCGRG00001002297	-	98	55.532	ENSCGRG00001013602	-	97	55.532
ENSCGRG00001002297	-	97	41.397	ENSCGRG00001015424	-	80	41.397
ENSCGRG00001002297	-	76	34.906	ENSCGRG00001013674	Snai2	54	34.906
ENSCGRG00001002297	-	87	31.579	ENSCGRG00001001429	Zfp574	73	31.579
ENSCGRG00001002297	-	96	46.411	ENSCGRG00001013367	Zfp61	65	46.411
ENSCGRG00001002297	-	98	46.715	ENSCGRG00001020646	Gm3854	69	46.715
ENSCGRG00001002297	-	99	42.071	ENSCGRG00001007115	-	93	42.071
ENSCGRG00001002297	-	85	32.530	ENSCGRG00001013279	Zfp784	75	30.660
ENSCGRG00001002297	-	96	40.044	ENSCGRG00001002406	Zfp39	63	42.015
ENSCGRG00001002297	-	97	32.441	ENSCGRG00001017330	Repin1	94	32.609
ENSCGRG00001002297	-	97	40.201	ENSCGRG00001011966	Zfp715	71	41.627

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001002297	-	86	51.852	ENSCING00000003470	-	94	51.852	Ciona_intestinalis
ENSCGRG00001002297	-	95	48.969	ENSCING00000018801	zf(c2h2)-138	98	48.969	Ciona_intestinalis
ENSCGRG00001002297	-	87	44.891	ENSCSAVG00000010156	-	92	44.891	Ciona_savignyi
ENSCGRG00001002297	-	99	57.477	ENSCGRG00000018332	Zfp53	87	57.477	Cricetulus_griseus_crigri
ENSCGRG00001002297	-	100	50.000	ENSCGRG00000000778	-	93	50.000	Cricetulus_griseus_crigri
ENSCGRG00001002297	-	89	38.228	ENSEBUG00000012454	-	89	38.228	Eptatretus_burgeri
ENSCGRG00001002297	-	96	42.433	ENSEBUG00000005655	-	88	46.565	Eptatretus_burgeri
ENSCGRG00001002297	-	98	39.450	ENSEBUG00000001525	-	89	39.450	Eptatretus_burgeri
ENSCGRG00001002297	-	96	41.935	ENSEBUG00000016878	-	93	41.935	Eptatretus_burgeri
ENSCGRG00001002297	-	87	41.349	ENSEBUG00000008792	-	94	39.623	Eptatretus_burgeri
ENSCGRG00001002297	-	97	43.797	ENSEBUG00000012823	-	77	44.101	Eptatretus_burgeri
ENSCGRG00001002297	-	95	60.614	ENSMAUG00000004844	-	91	60.614	Mesocricetus_auratus
ENSCGRG00001002297	-	99	49.871	ENSMAUG00000000939	-	89	49.871	Mesocricetus_auratus
ENSCGRG00001002297	-	99	57.836	ENSMAUG00000005974	-	92	57.836	Mesocricetus_auratus
ENSCGRG00001002297	-	99	57.014	ENSMOCG00000006946	Zfp53	91	56.742	Microtus_ochrogaster
ENSCGRG00001002297	-	99	51.026	ENSMOCG00000007851	-	94	51.026	Microtus_ochrogaster
ENSCGRG00001002297	-	99	51.203	MGP_CAROLIEiJ_G0021132	Zfp948	92	51.203	Mus_caroli
ENSCGRG00001002297	-	99	54.775	ENSMUSG00000062743	Zfp677	88	54.775	Mus_musculus
ENSCGRG00001002297	-	85	36.752	ENSPSIG00000009270	-	75	36.752	Pelodiscus_sinensis
ENSCGRG00001002297	-	99	46.881	ENSPEMG00000007241	-	94	46.881	Peromyscus_maniculatus_bairdii
ENSCGRG00001002297	-	99	44.444	ENSPEMG00000023883	-	93	44.444	Peromyscus_maniculatus_bairdii
ENSCGRG00001002297	-	99	55.576	ENSRNOG00000052406	LOC102552527	94	55.576	Rattus_norvegicus