EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001002406 (Gene tree)
Gene ID: -
Gene Symbol: Zfp39
Alias: CTfin33|Zfp-39
Full Name: zinc finger protein 39
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 16344 bases
Position: chrscaffold_4:72359649-72375992
Accession: 99183
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001002269	zf-C2H2	PF00096.26	7.9e-52	1	11
ENSCGRP00001002269	zf-C2H2	PF00096.26	7.9e-52	2	11
ENSCGRP00001002269	zf-C2H2	PF00096.26	7.9e-52	3	11
ENSCGRP00001002269	zf-C2H2	PF00096.26	7.9e-52	4	11
ENSCGRP00001002269	zf-C2H2	PF00096.26	7.9e-52	5	11
ENSCGRP00001002269	zf-C2H2	PF00096.26	7.9e-52	6	11
ENSCGRP00001002269	zf-C2H2	PF00096.26	7.9e-52	7	11
ENSCGRP00001002269	zf-C2H2	PF00096.26	7.9e-52	8	11
ENSCGRP00001002269	zf-C2H2	PF00096.26	7.9e-52	9	11
ENSCGRP00001002269	zf-C2H2	PF00096.26	7.9e-52	10	11
ENSCGRP00001002269	zf-C2H2	PF00096.26	7.9e-52	11	11
ENSCGRP00001002269	zf-met	PF12874.7	3.1e-11	1	2
ENSCGRP00001002269	zf-met	PF12874.7	3.1e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001002932	-	2151	-	ENSCGRP00001002269	716 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001002406's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001002406's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001002406	Zfp39	64	34.426	ENSCGRG00001017330	Repin1	84	35.698
ENSCGRG00001002406	Zfp39	58	32.877	ENSCGRG00001013279	Zfp784	66	33.803
ENSCGRG00001002406	Zfp39	59	38.519	ENSCGRG00001011389	Snai3	50	38.519
ENSCGRG00001002406	Zfp39	70	53.659	ENSCGRG00001001639	Zfp882	93	53.659
ENSCGRG00001002406	Zfp39	58	37.956	ENSCGRG00001013674	Snai2	51	37.956
ENSCGRG00001002406	Zfp39	74	47.170	ENSCGRG00001011966	Zfp715	85	47.170
ENSCGRG00001002406	Zfp39	92	48.433	ENSCGRG00001013939	Zfp454	98	48.433
ENSCGRG00001002406	Zfp39	62	45.221	ENSCGRG00001006591	Zkscan3	52	45.415
ENSCGRG00001002406	Zfp39	63	40.550	ENSCGRG00001019468	Zfp628	60	46.392
ENSCGRG00001002406	Zfp39	64	47.647	ENSCGRG00001004047	-	66	47.647
ENSCGRG00001002406	Zfp39	66	31.336	ENSCGRG00001001429	Zfp574	81	31.336
ENSCGRG00001002406	Zfp39	60	36.601	ENSCGRG00001008879	Maz	70	32.751
ENSCGRG00001002406	Zfp39	63	43.213	ENSCGRG00001015424	-	78	43.213
ENSCGRG00001002406	Zfp39	60	41.772	ENSCGRG00001013598	Zfp865	76	35.714
ENSCGRG00001002406	Zfp39	59	51.079	ENSCGRG00001013561	Zfp768	57	50.340
ENSCGRG00001002406	Zfp39	92	50.649	ENSCGRG00001012803	-	94	50.649
ENSCGRG00001002406	Zfp39	91	49.524	ENSCGRG00001007115	-	100	49.524
ENSCGRG00001002406	Zfp39	72	40.598	ENSCGRG00001024806	Zbtb16	53	40.598
ENSCGRG00001002406	Zfp39	93	56.075	ENSCGRG00001010752	2610008E11Rik	96	56.075
ENSCGRG00001002406	Zfp39	66	44.361	ENSCGRG00001012523	-	98	44.361
ENSCGRG00001002406	Zfp39	92	56.790	ENSCGRG00001010967	Zfp1	99	56.790
ENSCGRG00001002406	Zfp39	60	41.920	ENSCGRG00001013602	-	95	45.128
ENSCGRG00001002406	Zfp39	63	42.015	ENSCGRG00001002297	-	96	40.044
ENSCGRG00001002406	Zfp39	59	55.200	ENSCGRG00001019143	-	80	55.200
ENSCGRG00001002406	Zfp39	91	44.794	ENSCGRG00001021088	Zfp354a	98	44.794
ENSCGRG00001002406	Zfp39	92	54.229	ENSCGRG00001024303	-	99	54.229
ENSCGRG00001002406	Zfp39	64	51.466	ENSCGRG00001012640	Zfp94	80	51.466
ENSCGRG00001002406	Zfp39	68	58.182	ENSCGRG00001017579	Zfp112	73	58.182
ENSCGRG00001002406	Zfp39	91	41.398	ENSCGRG00001023858	Zfp560	87	41.398
ENSCGRG00001002406	Zfp39	60	33.604	ENSCGRG00001009557	Zfp319	91	34.318
ENSCGRG00001002406	Zfp39	63	30.795	ENSCGRG00001004071	Patz1	50	34.337
ENSCGRG00001002406	Zfp39	91	47.902	ENSCGRG00001024630	-	96	47.902
ENSCGRG00001002406	Zfp39	92	43.496	ENSCGRG00001018100	Zfp202	64	43.496
ENSCGRG00001002406	Zfp39	91	47.518	ENSCGRG00001000576	Zfp26	88	47.518
ENSCGRG00001002406	Zfp39	63	37.971	ENSCGRG00001019408	Zbtb17	56	40.446
ENSCGRG00001002406	Zfp39	59	46.809	ENSCGRG00001010581	Prdm5	72	46.809
ENSCGRG00001002406	Zfp39	92	49.856	ENSCGRG00001007163	-	100	51.379
ENSCGRG00001002406	Zfp39	57	41.406	ENSCGRG00001005125	Wt1	55	40.458
ENSCGRG00001002406	Zfp39	60	47.222	ENSCGRG00001012398	Zfp236	64	46.364
ENSCGRG00001002406	Zfp39	91	53.101	ENSCGRG00001020646	Gm3854	96	53.101
ENSCGRG00001002406	Zfp39	65	50.218	ENSCGRG00001013367	Zfp61	60	50.218

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001002406	Zfp39	92	60.030	ENSCPOG00000036704	-	99	60.030	Cavia_porcellus
ENSCGRG00001002406	Zfp39	100	99.721	ENSCGRG00000002730	Zfp39	100	99.721	Cricetulus_griseus_crigri
ENSCGRG00001002406	Zfp39	99	72.175	ENSJJAG00000018925	Zfp39	99	72.175	Jaculus_jaculus
ENSCGRG00001002406	Zfp39	99	93.220	ENSMAUG00000001536	Zfp39	99	93.220	Mesocricetus_auratus
ENSCGRG00001002406	Zfp39	99	83.217	ENSMOCG00000017961	Zfp39	99	83.217	Microtus_ochrogaster
ENSCGRG00001002406	Zfp39	100	81.006	MGP_PahariEiJ_G0017548	Zfp39	99	81.006	Mus_pahari
ENSCGRG00001002406	Zfp39	100	70.851	ENSNGAG00000019853	Zfp39	99	70.851	Nannospalax_galili
ENSCGRG00001002406	Zfp39	59	79.333	ENSODEG00000000805	-	100	79.333	Octodon_degus
ENSCGRG00001002406	Zfp39	99	89.185	ENSPEMG00000009428	Zfp39	99	89.185	Peromyscus_maniculatus_bairdii
ENSCGRG00001002406	Zfp39	100	79.330	ENSRNOG00000014712	Zfp39	99	79.330	Rattus_norvegicus