EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001002694 (Gene tree)
Gene ID: -
Gene Symbol: Chd6
Alias: 5430439G14Rik|6330406J24Rik
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 174489 bases
Position: chrscaffold_31:5213370-5387858
Accession: 100770276
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001002465	ResIII	PF04851.15	2.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001003262	-	10997	XM_016967421	ENSCGRP00001002465	2714 (aa)	XP_007646464	UPI00022F5A0E

Gene Model

Click here to download ENSCGRG00001002694's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001002694's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001002694	Chd6	58	63.618	ENSCGRG00001014351	Chd8	60	63.552
ENSCGRG00001002694	Chd6	78	62.863	ENSCGRG00001016150	Chd9	72	62.863
ENSCGRG00001002694	Chd6	77	65.538	ENSCGRG00001011949	Chd7	71	65.141

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001002694	Chd6	100	89.563	ENSG00000124177	CHD6	99	97.279	Homo_sapiens
ENSCGRG00001002694	Chd6	74	75.449	ENSAPOG00000013736	chd6	66	75.750	Acanthochromis_polyacanthus
ENSCGRG00001002694	Chd6	100	89.187	ENSAMEG00000009496	CHD6	100	89.150	Ailuropoda_melanoleuca
ENSCGRG00001002694	Chd6	74	75.300	ENSATEG00000005608	chd6	63	75.486	Anabas_testudineus
ENSCGRG00001002694	Chd6	99	71.224	ENSAPLG00000015592	CHD6	99	72.000	Anas_platyrhynchos
ENSCGRG00001002694	Chd6	99	66.837	ENSACAG00000006842	CHD6	99	67.188	Anolis_carolinensis
ENSCGRG00001002694	Chd6	100	89.269	ENSANAG00000037548	CHD6	99	91.376	Aotus_nancymaae
ENSCGRG00001002694	Chd6	77	72.892	ENSAMXG00000009576	chd6	77	69.485	Astyanax_mexicanus
ENSCGRG00001002694	Chd6	100	85.783	ENSBTAG00000005733	CHD6	100	85.893	Bos_taurus
ENSCGRG00001002694	Chd6	100	89.265	ENSCJAG00000017920	CHD6	99	91.193	Callithrix_jacchus
ENSCGRG00001002694	Chd6	100	88.668	ENSCAFG00000009236	CHD6	100	88.595	Canis_familiaris
ENSCGRG00001002694	Chd6	99	88.179	ENSCAFG00020012906	CHD6	99	94.694	Canis_lupus_dingo
ENSCGRG00001002694	Chd6	100	85.819	ENSCHIG00000017606	CHD6	100	85.929	Capra_hircus
ENSCGRG00001002694	Chd6	84	89.089	ENSTSYG00000014635	CHD6	100	89.045	Carlito_syrichta
ENSCGRG00001002694	Chd6	100	89.812	ENSCPOG00000015641	CHD6	100	89.849	Cavia_porcellus
ENSCGRG00001002694	Chd6	100	89.526	ENSCCAG00000036828	CHD6	99	91.376	Cebus_capucinus
ENSCGRG00001002694	Chd6	100	89.269	ENSCATG00000039248	CHD6	99	91.376	Cercocebus_atys
ENSCGRG00001002694	Chd6	100	89.541	ENSCLAG00000013743	CHD6	100	89.541	Chinchilla_lanigera
ENSCGRG00001002694	Chd6	100	89.599	ENSCSAG00000013997	CHD6	100	89.563	Chlorocebus_sabaeus
ENSCGRG00001002694	Chd6	91	88.134	ENSCHOG00000012647	CHD6	95	88.134	Choloepus_hoffmanni
ENSCGRG00001002694	Chd6	99	72.681	ENSCPBG00000019382	CHD6	99	73.126	Chrysemys_picta_bellii
ENSCGRG00001002694	Chd6	100	89.702	ENSCANG00000043435	CHD6	99	91.376	Colobus_angolensis_palliatus
ENSCGRG00001002694	Chd6	82	72.716	ENSDARG00000017244	chd6	79	73.137	Danio_rerio
ENSCGRG00001002694	Chd6	99	87.422	ENSDNOG00000004176	CHD6	99	87.422	Dasypus_novemcinctus
ENSCGRG00001002694	Chd6	99	88.220	ENSEASG00005023433	CHD6	95	95.560	Equus_asinus_asinus
ENSCGRG00001002694	Chd6	99	88.995	ENSECAG00000011761	CHD6	100	88.958	Equus_caballus
ENSCGRG00001002694	Chd6	72	79.511	ENSELUG00000012309	chd6	88	79.511	Esox_lucius
ENSCGRG00001002694	Chd6	100	88.893	ENSFCAG00000003572	CHD6	100	88.893	Felis_catus
ENSCGRG00001002694	Chd6	99	70.701	ENSFALG00000012563	CHD6	98	71.026	Ficedula_albicollis
ENSCGRG00001002694	Chd6	99	89.926	ENSFDAG00000013791	CHD6	99	89.926	Fukomys_damarensis
ENSCGRG00001002694	Chd6	73	69.264	ENSGMOG00000011715	chd6	85	69.407	Gadus_morhua
ENSCGRG00001002694	Chd6	78	69.462	ENSGACG00000000037	chd6	86	69.284	Gasterosteus_aculeatus
ENSCGRG00001002694	Chd6	100	89.489	ENSGGOG00000013123	CHD6	99	91.376	Gorilla_gorilla
ENSCGRG00001002694	Chd6	74	75.067	ENSHBUG00000014701	chd6	63	75.200	Haplochromis_burtoni
ENSCGRG00001002694	Chd6	100	90.074	ENSHGLG00000004548	CHD6	100	90.110	Heterocephalus_glaber_female
ENSCGRG00001002694	Chd6	100	90.074	ENSHGLG00100006401	CHD6	100	90.110	Heterocephalus_glaber_male
ENSCGRG00001002694	Chd6	76	76.834	ENSIPUG00000003692	chd6	77	75.935	Ictalurus_punctatus
ENSCGRG00001002694	Chd6	100	90.695	ENSSTOG00000013382	CHD6	100	90.695	Ictidomys_tridecemlineatus
ENSCGRG00001002694	Chd6	91	72.856	ENSLACG00000010881	CHD6	86	76.729	Latimeria_chalumnae
ENSCGRG00001002694	Chd6	73	80.260	ENSLOCG00000007386	chd6	84	74.864	Lepisosteus_oculatus
ENSCGRG00001002694	Chd6	100	88.562	ENSLAFG00000012144	CHD6	100	88.562	Loxodonta_africana
ENSCGRG00001002694	Chd6	100	89.636	ENSMFAG00000032830	CHD6	99	91.376	Macaca_fascicularis
ENSCGRG00001002694	Chd6	100	89.636	ENSMMUG00000020458	CHD6	99	91.376	Macaca_mulatta
ENSCGRG00001002694	Chd6	100	89.636	ENSMNEG00000040847	CHD6	99	91.376	Macaca_nemestrina
ENSCGRG00001002694	Chd6	99	89.520	ENSMLEG00000031965	CHD6	99	91.376	Mandrillus_leucophaeus
ENSCGRG00001002694	Chd6	77	70.091	ENSMAMG00000013111	chd6	63	75.536	Mastacembelus_armatus
ENSCGRG00001002694	Chd6	99	71.167	ENSMGAG00000001121	CHD6	99	71.643	Meleagris_gallopavo
ENSCGRG00001002694	Chd6	99	89.871	ENSMICG00000016641	CHD6	99	91.927	Microcebus_murinus
ENSCGRG00001002694	Chd6	89	79.017	ENSMODG00000000720	-	99	79.100	Monodelphis_domestica
ENSCGRG00001002694	Chd6	100	93.884	MGP_CAROLIEiJ_G0024604	Chd6	100	97.466	Mus_caroli
ENSCGRG00001002694	Chd6	100	94.178	ENSMUSG00000057133	Chd6	100	97.382	Mus_musculus
ENSCGRG00001002694	Chd6	100	93.847	MGP_PahariEiJ_G0026048	Chd6	100	97.635	Mus_pahari
ENSCGRG00001002694	Chd6	100	94.068	MGP_SPRETEiJ_G0025526	Chd6	100	97.466	Mus_spretus
ENSCGRG00001002694	Chd6	100	87.784	ENSMPUG00000017695	CHD6	100	87.748	Mustela_putorius_furo
ENSCGRG00001002694	Chd6	100	88.157	ENSMLUG00000016247	CHD6	100	88.121	Myotis_lucifugus
ENSCGRG00001002694	Chd6	79	72.745	ENSNBRG00000013839	chd6	80	72.681	Neolamprologus_brichardi
ENSCGRG00001002694	Chd6	100	88.060	ENSNLEG00000006496	CHD6	99	88.224	Nomascus_leucogenys
ENSCGRG00001002694	Chd6	100	84.994	ENSOPRG00000013376	-	100	84.958	Ochotona_princeps
ENSCGRG00001002694	Chd6	83	74.439	ENSONIG00000000393	chd6	84	74.416	Oreochromis_niloticus
ENSCGRG00001002694	Chd6	99	69.387	ENSOANG00000014347	CHD6	99	69.409	Ornithorhynchus_anatinus
ENSCGRG00001002694	Chd6	99	87.339	ENSOCUG00000012394	CHD6	100	87.302	Oryctolagus_cuniculus
ENSCGRG00001002694	Chd6	77	73.770	ENSORLG00020021891	chd6	95	85.571	Oryzias_latipes_hni
ENSCGRG00001002694	Chd6	99	88.268	ENSOGAG00000002427	CHD6	100	88.006	Otolemur_garnettii
ENSCGRG00001002694	Chd6	99	83.713	ENSOARG00000002597	CHD6	100	83.824	Ovis_aries
ENSCGRG00001002694	Chd6	100	89.003	ENSPPRG00000014756	CHD6	100	89.003	Panthera_pardus
ENSCGRG00001002694	Chd6	100	88.893	ENSPTIG00000011094	CHD6	100	88.893	Panthera_tigris_altaica
ENSCGRG00001002694	Chd6	100	89.710	ENSPTRG00000013504	CHD6	99	91.376	Pan_troglodytes
ENSCGRG00001002694	Chd6	100	89.636	ENSPANG00000025554	CHD6	99	91.560	Papio_anubis
ENSCGRG00001002694	Chd6	76	75.979	ENSPKIG00000005578	chd6	79	72.408	Paramormyrops_kingsleyae
ENSCGRG00001002694	Chd6	77	75.818	ENSPMGG00000014877	chd6	84	74.862	Periophthalmus_magnuspinnatus
ENSCGRG00001002694	Chd6	100	78.173	ENSPCIG00000028037	CHD6	100	78.760	Phascolarctos_cinereus
ENSCGRG00001002694	Chd6	72	74.536	ENSPLAG00000003128	chd6	69	73.524	Poecilia_latipinna
ENSCGRG00001002694	Chd6	72	74.652	ENSPREG00000022653	chd6	99	85.714	Poecilia_reticulata
ENSCGRG00001002694	Chd6	100	89.493	ENSPPYG00000011016	CHD6	100	89.456	Pongo_abelii
ENSCGRG00001002694	Chd6	99	89.543	ENSPCOG00000001089	CHD6	99	91.376	Propithecus_coquereli
ENSCGRG00001002694	Chd6	79	74.048	ENSPNYG00000022516	chd6	80	73.966	Pundamilia_nyererei
ENSCGRG00001002694	Chd6	75	75.336	ENSPNAG00000012825	chd6	78	70.978	Pygocentrus_nattereri
ENSCGRG00001002694	Chd6	100	93.552	ENSRNOG00000016744	Chd6	100	93.552	Rattus_norvegicus
ENSCGRG00001002694	Chd6	100	89.342	ENSSBOG00000022089	CHD6	99	91.376	Saimiri_boliviensis_boliviensis
ENSCGRG00001002694	Chd6	100	77.615	ENSSHAG00000017072	CHD6	100	78.320	Sarcophilus_harrisii
ENSCGRG00001002694	Chd6	78	75.439	ENSSFOG00015012920	chd6	81	72.502	Scleropages_formosus
ENSCGRG00001002694	Chd6	59	98.684	ENSSARG00000002615	-	61	98.684	Sorex_araneus
ENSCGRG00001002694	Chd6	100	87.721	ENSSSCG00000007360	CHD6	100	88.735	Sus_scrofa
ENSCGRG00001002694	Chd6	97	72.662	ENSTGUG00000003179	CHD6	99	73.003	Taeniopygia_guttata
ENSCGRG00001002694	Chd6	74	76.945	ENSTNIG00000017487	chd6	84	76.945	Tetraodon_nigroviridis
ENSCGRG00001002694	Chd6	100	85.011	ENSTTRG00000013438	CHD6	100	84.974	Tursiops_truncatus
ENSCGRG00001002694	Chd6	99	87.925	ENSUAMG00000024036	CHD6	95	94.015	Ursus_americanus
ENSCGRG00001002694	Chd6	99	89.361	ENSUMAG00000002017	CHD6	95	94.015	Ursus_maritimus
ENSCGRG00001002694	Chd6	94	87.817	ENSVPAG00000007941	CHD6	95	87.885	Vicugna_pacos
ENSCGRG00001002694	Chd6	100	88.562	ENSVVUG00000029164	CHD6	100	88.525	Vulpes_vulpes
ENSCGRG00001002694	Chd6	100	60.400	ENSXETG00000021445	chd6	100	60.619	Xenopus_tropicalis