EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001002732 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 3096 bases
Position: chrscaffold_116:38697-41792
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001002488	PAP_RNA-bind	PF04926.15	9.2e-22	1	1
ENSCGRP00001002490	PAP_RNA-bind	PF04926.15	5.5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001003305	-	2070	-	ENSCGRP00001002490	689 (aa)	-	-
ENSCGRT00001003303	-	1800	-	ENSCGRP00001002488	599 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001002732's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001002732's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001002732	-	99	81.956	ENSCGRG00001000229	-	99	81.956
ENSCGRG00001002732	-	98	53.774	ENSCGRG00001014951	Papolg	99	53.774
ENSCGRG00001002732	-	99	87.263	ENSCGRG00001022693	-	99	87.263

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001002732	-	99	83.871	ENSG00000090060	PAPOLA	100	86.526	Homo_sapiens
ENSCGRG00001002732	-	99	84.261	ENSAMEG00000014142	PAPOLA	99	84.261	Ailuropoda_melanoleuca
ENSCGRG00001002732	-	99	80.054	ENSAPLG00000006645	PAPOLA	99	80.054	Anas_platyrhynchos
ENSCGRG00001002732	-	97	83.677	ENSACAG00000013474	PAPOLA	99	83.156	Anolis_carolinensis
ENSCGRG00001002732	-	81	79.198	ENSANAG00000027941	-	98	79.198	Aotus_nancymaae
ENSCGRG00001002732	-	99	83.602	ENSANAG00000018274	PAPOLA	99	84.473	Aotus_nancymaae
ENSCGRG00001002732	-	99	60.840	ENSAMXG00000018141	papola	99	72.793	Astyanax_mexicanus
ENSCGRG00001002732	-	99	84.417	ENSBTAG00000004054	PAPOLA	99	84.417	Bos_taurus
ENSCGRG00001002732	-	99	83.602	ENSCJAG00000006512	PAPOLA	99	84.473	Callithrix_jacchus
ENSCGRG00001002732	-	99	83.871	ENSCAFG00000017783	PAPOLA	99	83.871	Canis_familiaris
ENSCGRG00001002732	-	99	84.469	ENSCAFG00020011550	PAPOLA	99	84.282	Canis_lupus_dingo
ENSCGRG00001002732	-	99	84.011	ENSCHIG00000025004	-	99	84.011	Capra_hircus
ENSCGRG00001002732	-	99	84.082	ENSTSYG00000012384	PAPOLA	99	84.082	Carlito_syrichta
ENSCGRG00001002732	-	99	86.415	ENSCPOG00000002648	PAPOLA	99	86.415	Cavia_porcellus
ENSCGRG00001002732	-	99	83.737	ENSCCAG00000025120	PAPOLA	99	83.737	Cebus_capucinus
ENSCGRG00001002732	-	99	83.871	ENSCATG00000018815	PAPOLA	99	84.730	Cercocebus_atys
ENSCGRG00001002732	-	99	84.011	ENSCLAG00000016342	PAPOLA	99	84.011	Chinchilla_lanigera
ENSCGRG00001002732	-	99	83.871	ENSCSAG00000010516	PAPOLA	99	83.871	Chlorocebus_sabaeus
ENSCGRG00001002732	-	70	77.049	ENSCHOG00000001115	PAPOLA	72	77.049	Choloepus_hoffmanni
ENSCGRG00001002732	-	99	81.732	ENSCPBG00000024125	PAPOLA	99	81.732	Chrysemys_picta_bellii
ENSCGRG00001002732	-	99	78.976	ENSCANG00000000159	PAPOLA	99	78.976	Colobus_angolensis_palliatus
ENSCGRG00001002732	-	98	76.138	ENSCGRG00000000257	-	99	73.984	Cricetulus_griseus_crigri
ENSCGRG00001002732	-	99	87.211	ENSCGRG00000003664	-	99	87.211	Cricetulus_griseus_crigri
ENSCGRG00001002732	-	97	73.655	ENSCGRG00000001888	-	96	73.655	Cricetulus_griseus_crigri
ENSCGRG00001002732	-	84	43.303	ENSCSEG00000001841	-	88	40.000	Cynoglossus_semilaevis
ENSCGRG00001002732	-	93	68.033	ENSDARG00000009585	papola	99	61.446	Danio_rerio
ENSCGRG00001002732	-	62	87.696	ENSDORG00000013415	-	99	80.943	Dipodomys_ordii
ENSCGRG00001002732	-	99	74.286	ENSETEG00000004889	PAPOLA	99	74.286	Echinops_telfairi
ENSCGRG00001002732	-	96	65.728	ENSELUG00000018972	papola	99	59.688	Esox_lucius
ENSCGRG00001002732	-	99	84.824	ENSFCAG00000006784	PAPOLA	99	84.824	Felis_catus
ENSCGRG00001002732	-	97	81.388	ENSFALG00000002547	PAPOLA	98	77.602	Ficedula_albicollis
ENSCGRG00001002732	-	99	82.791	ENSFDAG00000010370	PAPOLA	99	82.791	Fukomys_damarensis
ENSCGRG00001002732	-	76	62.799	ENSGMOG00000010209	papola	99	63.168	Gadus_morhua
ENSCGRG00001002732	-	97	82.567	ENSGALG00000033099	PAPOLA	99	79.539	Gallus_gallus
ENSCGRG00001002732	-	73	46.203	ENSGACG00000006142	-	99	45.781	Gasterosteus_aculeatus
ENSCGRG00001002732	-	98	82.261	ENSGAGG00000020500	PAPOLA	99	82.477	Gopherus_agassizii
ENSCGRG00001002732	-	99	83.871	ENSGGOG00000006287	PAPOLA	99	83.871	Gorilla_gorilla
ENSCGRG00001002732	-	99	75.939	ENSHGLG00000017457	-	99	75.939	Heterocephalus_glaber_female
ENSCGRG00001002732	-	99	83.469	ENSHGLG00000007909	-	99	83.469	Heterocephalus_glaber_female
ENSCGRG00001002732	-	99	74.143	ENSHGLG00000007467	-	99	73.324	Heterocephalus_glaber_female
ENSCGRG00001002732	-	99	83.333	ENSHGLG00100017273	PAPOLA	99	83.333	Heterocephalus_glaber_male
ENSCGRG00001002732	-	99	59.898	ENSIPUG00000005919	papola	99	59.898	Ictalurus_punctatus
ENSCGRG00001002732	-	99	84.417	ENSSTOG00000011471	PAPOLA	99	84.417	Ictidomys_tridecemlineatus
ENSCGRG00001002732	-	99	83.129	ENSJJAG00000024340	Papola	99	83.129	Jaculus_jaculus
ENSCGRG00001002732	-	96	71.065	ENSLACG00000018136	PAPOLA	99	67.385	Latimeria_chalumnae
ENSCGRG00001002732	-	99	57.351	ENSLOCG00000008632	papola	99	57.483	Lepisosteus_oculatus
ENSCGRG00001002732	-	99	83.673	ENSLAFG00000000946	PAPOLA	99	83.673	Loxodonta_africana
ENSCGRG00001002732	-	99	83.871	ENSMFAG00000001792	PAPOLA	99	84.375	Macaca_fascicularis
ENSCGRG00001002732	-	99	83.871	ENSMMUG00000018610	PAPOLA	99	83.871	Macaca_mulatta
ENSCGRG00001002732	-	99	83.871	ENSMNEG00000043747	PAPOLA	99	83.871	Macaca_nemestrina
ENSCGRG00001002732	-	99	83.871	ENSMLEG00000032066	PAPOLA	99	83.871	Mandrillus_leucophaeus
ENSCGRG00001002732	-	86	81.774	ENSMGAG00000013228	-	99	81.774	Meleagris_gallopavo
ENSCGRG00001002732	-	99	86.721	ENSMAUG00000017178	Papola	99	86.721	Mesocricetus_auratus
ENSCGRG00001002732	-	99	84.959	ENSMICG00000010347	PAPOLA	99	84.959	Microcebus_murinus
ENSCGRG00001002732	-	99	86.585	ENSMOCG00000021670	Papola	99	86.585	Microtus_ochrogaster
ENSCGRG00001002732	-	97	75.402	ENSMODG00000001969	-	99	72.071	Monodelphis_domestica
ENSCGRG00001002732	-	99	83.604	ENSMODG00000012887	-	99	83.604	Monodelphis_domestica
ENSCGRG00001002732	-	99	85.772	MGP_CAROLIEiJ_G0018093	Papola	100	86.957	Mus_caroli
ENSCGRG00001002732	-	99	85.908	ENSMUSG00000021111	Papola	99	87.267	Mus_musculus
ENSCGRG00001002732	-	99	85.908	MGP_PahariEiJ_G0029850	Papola	100	87.267	Mus_pahari
ENSCGRG00001002732	-	99	86.043	MGP_SPRETEiJ_G0018943	Papola	100	87.578	Mus_spretus
ENSCGRG00001002732	-	99	84.959	ENSMPUG00000003054	PAPOLA	99	84.959	Mustela_putorius_furo
ENSCGRG00001002732	-	99	83.198	ENSMLUG00000010922	PAPOLA	99	83.198	Myotis_lucifugus
ENSCGRG00001002732	-	99	84.417	ENSNGAG00000022172	Papola	99	84.417	Nannospalax_galili
ENSCGRG00001002732	-	99	79.250	ENSNLEG00000000625	PAPOLA	99	79.250	Nomascus_leucogenys
ENSCGRG00001002732	-	69	80.153	ENSMEUG00000007831	-	73	80.153	Notamacropus_eugenii
ENSCGRG00001002732	-	97	80.139	ENSOPRG00000007625	PAPOLA	99	80.139	Ochotona_princeps
ENSCGRG00001002732	-	71	47.639	ENSONIG00000001062	-	95	47.548	Oreochromis_niloticus
ENSCGRG00001002732	-	98	83.465	ENSOANG00000013812	PAPOLA	99	78.940	Ornithorhynchus_anatinus
ENSCGRG00001002732	-	99	81.633	ENSOCUG00000011531	PAPOLA	99	81.633	Oryctolagus_cuniculus
ENSCGRG00001002732	-	99	84.438	ENSOGAG00000004611	PAPOLA	99	84.438	Otolemur_garnettii
ENSCGRG00001002732	-	99	84.553	ENSOARG00000016579	-	99	84.553	Ovis_aries
ENSCGRG00001002732	-	99	83.871	ENSPPAG00000030505	PAPOLA	99	83.871	Pan_paniscus
ENSCGRG00001002732	-	99	84.824	ENSPPRG00000008616	PAPOLA	99	84.824	Panthera_pardus
ENSCGRG00001002732	-	99	84.762	ENSPTIG00000018852	PAPOLA	99	84.762	Panthera_tigris_altaica
ENSCGRG00001002732	-	99	83.871	ENSPTRG00000006704	PAPOLA	99	83.871	Pan_troglodytes
ENSCGRG00001002732	-	99	83.871	ENSPANG00000025582	PAPOLA	99	83.871	Papio_anubis
ENSCGRG00001002732	-	97	66.456	ENSPKIG00000014471	papola	99	61.619	Paramormyrops_kingsleyae
ENSCGRG00001002732	-	99	82.003	ENSPSIG00000014157	PAPOLA	87	82.003	Pelodiscus_sinensis
ENSCGRG00001002732	-	99	86.856	ENSPEMG00000000043	Papola	99	86.856	Peromyscus_maniculatus_bairdii
ENSCGRG00001002732	-	99	83.356	ENSPCIG00000013234	PAPOLA	100	83.115	Phascolarctos_cinereus
ENSCGRG00001002732	-	99	83.699	ENSPPYG00000006128	PAPOLA	99	83.699	Pongo_abelii
ENSCGRG00001002732	-	88	82.278	ENSPCAG00000004199	PAPOLA	96	82.278	Procavia_capensis
ENSCGRG00001002732	-	99	81.250	ENSPCOG00000022117	PAPOLA	99	81.250	Propithecus_coquereli
ENSCGRG00001002732	-	99	83.875	ENSPVAG00000013925	PAPOLA	99	83.875	Pteropus_vampyrus
ENSCGRG00001002732	-	99	61.044	ENSPNAG00000010467	papola	99	62.483	Pygocentrus_nattereri
ENSCGRG00001002732	-	99	85.366	ENSRNOG00000004827	Papola	99	85.366	Rattus_norvegicus
ENSCGRG00001002732	-	97	84.185	ENSRBIG00000038490	PAPOLA	98	83.804	Rhinopithecus_bieti
ENSCGRG00001002732	-	99	83.737	ENSRROG00000025545	PAPOLA	99	83.737	Rhinopithecus_roxellana
ENSCGRG00001002732	-	99	83.536	ENSSBOG00000024061	PAPOLA	99	83.536	Saimiri_boliviensis_boliviensis
ENSCGRG00001002732	-	99	83.537	ENSSHAG00000015211	PAPOLA	99	83.537	Sarcophilus_harrisii
ENSCGRG00001002732	-	99	61.436	ENSSFOG00015004431	papola	98	73.247	Scleropages_formosus
ENSCGRG00001002732	-	72	50.533	ENSSDUG00000018247	-	69	50.533	Seriola_dumerili
ENSCGRG00001002732	-	99	81.461	ENSSPUG00000005835	PAPOLA	99	81.461	Sphenodon_punctatus
ENSCGRG00001002732	-	99	84.417	ENSSSCG00000002505	-	99	84.417	Sus_scrofa
ENSCGRG00001002732	-	99	79.891	ENSTGUG00000012687	PAPOLA	99	79.891	Taeniopygia_guttata
ENSCGRG00001002732	-	69	82.927	ENSTBEG00000000194	PAPOLA	74	77.596	Tupaia_belangeri
ENSCGRG00001002732	-	79	86.842	ENSTTRG00000005717	PAPOLA	80	86.842	Tursiops_truncatus
ENSCGRG00001002732	-	64	85.071	ENSUAMG00000025737	PAPOLA	99	84.471	Ursus_americanus
ENSCGRG00001002732	-	99	83.946	ENSVPAG00000006464	PAPOLA	99	83.946	Vicugna_pacos
ENSCGRG00001002732	-	99	84.553	ENSVVUG00000028340	PAPOLA	99	84.553	Vulpes_vulpes
ENSCGRG00001002732	-	98	75.981	ENSXETG00000013949	papola	99	73.848	Xenopus_tropicalis