EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCGRG00001003185 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
U2 small nuclear RNA auxiliary factor 2
Gene Type
protein_coding
Species
Cricetulus_griseus_chok1gshd
Status
putative
Strand
Minus strand
Length
17949 bases
Position
chrscaffold_52:1863363-1881311
Accession
100769215
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCGRP00001002803RRM_1PF00076.229.3e-3513
ENSCGRP00001002803RRM_1PF00076.229.3e-3523
ENSCGRP00001002803RRM_1PF00076.229.3e-3533
ENSCGRP00001002801RRM_1PF00076.221.1e-3413
ENSCGRP00001002801RRM_1PF00076.221.1e-3423
ENSCGRP00001002801RRM_1PF00076.221.1e-3433
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCGRT00001003860-1371-ENSCGRP00001002803456 (aa)-UPI0000DA1C49
ENSCGRT00001003855-1428XM_007616153ENSCGRP00001002801475 (aa)XP_007614343UPI000000412C
Gene Model
Click here to download ENSCGRG00001003185's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001003185's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCGRG00001003185-6337.255ENSCGRG00001017442Puf605935.294
ENSCGRG00001003185-9987.764ENSCGRG00001007486-9987.342
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCGRG00001003185-10099.789ENSG00000063244U2AF2100100.000Homo_sapiens
ENSCGRG00001003185-6789.783ENSAPOG00000023155u2af2a10089.783Acanthochromis_polyacanthus
ENSCGRG00001003185-9975.527ENSAPOG00000002208-10073.718Acanthochromis_polyacanthus
ENSCGRG00001003185-8897.356ENSAMEG00000003864U2AF210097.356Ailuropoda_melanoleuca
ENSCGRG00001003185-8595.630ENSACIG00000005749u2af2a9492.629Amphilophus_citrinellus
ENSCGRG00001003185-9674.518ENSACIG00000014173-8977.938Amphilophus_citrinellus
ENSCGRG00001003185-9975.949ENSAOCG00000003595-10074.145Amphiprion_ocellaris
ENSCGRG00001003185-9991.685ENSAOCG00000015571u2af2a10091.685Amphiprion_ocellaris
ENSCGRG00001003185-9676.275ENSAPEG00000020062-8382.429Amphiprion_percula
ENSCGRG00001003185-8595.373ENSAPEG00000009376u2af2a9592.629Amphiprion_percula
ENSCGRG00001003185-10089.787ENSATEG00000022332u2af2a10089.362Anabas_testudineus
ENSCGRG00001003185-9676.419ENSATEG00000020577-8880.147Anabas_testudineus
ENSCGRG00001003185-10096.802ENSACAG00000015489U2AF210096.802Anolis_carolinensis
ENSCGRG00001003185-10097.796ENSANAG00000028042U2AF210097.796Aotus_nancymaae
ENSCGRG00001003185-9975.949ENSACLG00000020793-10074.145Astatotilapia_calliptera
ENSCGRG00001003185-10090.213ENSACLG00000022181u2af2a10089.787Astatotilapia_calliptera
ENSCGRG00001003185-10086.170ENSAMXG00000033347u2af2a10086.809Astyanax_mexicanus
ENSCGRG00001003185-9989.035ENSAMXG00000039454u2af2b9988.596Astyanax_mexicanus
ENSCGRG00001003185-10099.781ENSBTAG00000002830U2AF210099.781Bos_taurus
ENSCGRG00001003185-9157.110WBGene00006697uaf-110056.081Caenorhabditis_elegans
ENSCGRG00001003185-10099.789ENSCJAG00000017128U2AF210099.789Callithrix_jacchus
ENSCGRG00001003185-10099.158ENSCAFG00000002551U2AF210099.158Canis_familiaris
ENSCGRG00001003185-9795.680ENSCAFG00020015445U2AF29795.680Canis_lupus_dingo
ENSCGRG00001003185-8783.582ENSCHIG00000023595U2AF28982.767Capra_hircus
ENSCGRG00001003185-10099.789ENSTSYG00000007432U2AF210099.789Carlito_syrichta
ENSCGRG00001003185-9699.563ENSCAPG00000008466U2AF210099.563Cavia_aperea
ENSCGRG00001003185-10099.579ENSCPOG00000001582U2AF210099.579Cavia_porcellus
ENSCGRG00001003185-10099.789ENSCCAG00000023336U2AF210099.789Cebus_capucinus
ENSCGRG00001003185-10099.158ENSCATG00000004637U2AF210099.158Cercocebus_atys
ENSCGRG00001003185-10099.158ENSCLAG00000000596U2AF210099.158Chinchilla_lanigera
ENSCGRG00001003185-10099.158ENSCSAG00000001722U2AF210099.158Chlorocebus_sabaeus
ENSCGRG00001003185-9696.404ENSCPBG00000004485U2AF210099.674Chrysemys_picta_bellii
ENSCGRG00001003185-8570.694ENSCING00000003455-8070.694Ciona_intestinalis
ENSCGRG00001003185-8569.845ENSCSAVG00000006813-8767.494Ciona_savignyi
ENSCGRG00001003185-9198.843ENSCANG00000031002-9698.843Colobus_angolensis_palliatus
ENSCGRG00001003185-10091.004ENSCANG00000043845-10091.423Colobus_angolensis_palliatus
ENSCGRG00001003185-9987.764ENSCGRG00000018587-9987.342Cricetulus_griseus_crigri
ENSCGRG00001003185-5099.130ENSCGRG00000004524-7994.672Cricetulus_griseus_crigri
ENSCGRG00001003185-9974.304ENSCSEG00000020504-8878.109Cynoglossus_semilaevis
ENSCGRG00001003185-7391.083ENSCSEG00000018709u2af2a8191.083Cynoglossus_semilaevis
ENSCGRG00001003185-10091.485ENSCVAG00000001259u2af2a10091.485Cyprinodon_variegatus
ENSCGRG00001003185-9976.160ENSCVAG00000023307-10075.855Cyprinodon_variegatus
ENSCGRG00001003185-10087.527ENSDARG00000012505u2af2a10088.602Danio_rerio
ENSCGRG00001003185-10085.474ENSDARG00000011740u2af2b10085.474Danio_rerio
ENSCGRG00001003185-9198.843ENSDNOG00000047039U2AF29698.843Dasypus_novemcinctus
ENSCGRG00001003185-10099.789ENSDORG00000003250U2af210099.789Dipodomys_ordii
ENSCGRG00001003185-8572.890FBgn0005411U2af5010072.776Drosophila_melanogaster
ENSCGRG00001003185-8951.270FBgn0034834LS28553.904Drosophila_melanogaster
ENSCGRG00001003185-9159.268ENSEBUG00000001732U2AF29061.951Eptatretus_burgeri
ENSCGRG00001003185-9275.118ENSEBUG00000010917U2AF28976.284Eptatretus_burgeri
ENSCGRG00001003185-9796.739ENSEASG00005020708U2AF29096.739Equus_asinus_asinus
ENSCGRG00001003185-100100.000ENSECAG00000010110U2AF2100100.000Equus_caballus
ENSCGRG00001003185-10087.423ENSELUG00000015850u2af2a10087.397Esox_lucius
ENSCGRG00001003185-9975.267ENSELUG00000018459-10072.863Esox_lucius
ENSCGRG00001003185-10085.870ENSELUG00000022291u2af2b10085.652Esox_lucius
ENSCGRG00001003185-10099.789ENSFCAG00000011504U2AF210099.789Felis_catus
ENSCGRG00001003185-9997.868ENSFDAG00000011264U2AF29997.868Fukomys_damarensis
ENSCGRG00001003185-10091.485ENSFHEG00000016025u2af2a10091.485Fundulus_heteroclitus
ENSCGRG00001003185-10089.371ENSGMOG00000004535u2af2a10090.889Gadus_morhua
ENSCGRG00001003185-9896.280ENSGALG00000052748U2AF26596.280Gallus_gallus
ENSCGRG00001003185-10091.485ENSGAFG00000013626u2af2a8891.485Gambusia_affinis
ENSCGRG00001003185-9975.108ENSGAFG00000005628-10073.102Gambusia_affinis
ENSCGRG00001003185-10090.414ENSGACG00000010632U2AF210090.850Gasterosteus_aculeatus
ENSCGRG00001003185-9976.000ENSGACG00000014500-10074.684Gasterosteus_aculeatus
ENSCGRG00001003185-6799.674ENSGAGG00000011849U2AF210099.674Gopherus_agassizii
ENSCGRG00001003185-5689.494ENSGGOG00000036399-9689.494Gorilla_gorilla
ENSCGRG00001003185-9975.949ENSHBUG00000017424-10074.145Haplochromis_burtoni
ENSCGRG00001003185-10090.213ENSHBUG00000013935u2af2a10089.787Haplochromis_burtoni
ENSCGRG00001003185-10099.789ENSHGLG00000005889U2AF210099.789Heterocephalus_glaber_female
ENSCGRG00001003185-9699.782ENSHGLG00100004757U2AF210099.782Heterocephalus_glaber_male
ENSCGRG00001003185-10088.602ENSHCOG00000019367u2af2a10089.032Hippocampus_comes
ENSCGRG00001003185-10084.665ENSIPUG00000007717u2af2a10085.961Ictalurus_punctatus
ENSCGRG00001003185-9976.044ENSIPUG00000009844-10071.648Ictalurus_punctatus
ENSCGRG00001003185-9988.121ENSIPUG00000009077u2af29987.905Ictalurus_punctatus
ENSCGRG00001003185-10099.789ENSSTOG00000019595U2AF210099.789Ictidomys_tridecemlineatus
ENSCGRG00001003185-100100.000ENSJJAG00000017705U2af2100100.000Jaculus_jaculus
ENSCGRG00001003185-10089.574ENSKMAG00000005960u2af2a10089.149Kryptolebias_marmoratus
ENSCGRG00001003185-10091.266ENSLBEG00000016162u2af2a10091.266Labrus_bergylta
ENSCGRG00001003185-9674.026ENSLBEG00000005001-8976.978Labrus_bergylta
ENSCGRG00001003185-8098.638ENSLACG00000001648U2AF210098.638Latimeria_chalumnae
ENSCGRG00001003185-7191.667ENSLOCG00000008050u2af2b7996.350Lepisosteus_oculatus
ENSCGRG00001003185-9974.786ENSLOCG00000010843-10073.718Lepisosteus_oculatus
ENSCGRG00001003185-10099.579ENSLAFG00000018056-10099.579Loxodonta_africana
ENSCGRG00001003185-10085.474ENSLAFG00000028496-10085.474Loxodonta_africana
ENSCGRG00001003185-10099.789ENSMFAG00000038383U2AF210099.789Macaca_fascicularis
ENSCGRG00001003185-10099.579ENSMMUG00000004810U2AF210099.579Macaca_mulatta
ENSCGRG00001003185-10099.158ENSMNEG00000042096U2AF210099.158Macaca_nemestrina
ENSCGRG00001003185-9799.129ENSMLEG00000032219U2AF28999.129Mandrillus_leucophaeus
ENSCGRG00001003185-9973.987ENSMAMG00000020158-10072.863Mastacembelus_armatus
ENSCGRG00001003185-10089.871ENSMAMG00000019817u2af2a10089.871Mastacembelus_armatus
ENSCGRG00001003185-10091.921ENSMZEG00005016563u2af2a10091.921Maylandia_zebra
ENSCGRG00001003185-9975.949ENSMZEG00005023318-10074.145Maylandia_zebra
ENSCGRG00001003185-9899.140ENSMAUG00000008180U2af29999.140Mesocricetus_auratus
ENSCGRG00001003185-10099.158ENSMICG00000027681U2AF210099.158Microcebus_murinus
ENSCGRG00001003185-100100.000ENSMOCG00000013214-100100.000Microtus_ochrogaster
ENSCGRG00001003185-6796.743ENSMOCG00000001018-10096.743Microtus_ochrogaster
ENSCGRG00001003185-10088.842ENSMOCG00000007227-10086.526Microtus_ochrogaster
ENSCGRG00001003185-8595.116ENSMMOG00000016600u2af2a9392.138Mola_mola
ENSCGRG00001003185-9969.723ENSMMOG00000000531-10069.723Mola_mola
ENSCGRG00001003185-10091.921ENSMALG00000009985u2af2a10091.048Monopterus_albus
ENSCGRG00001003185-100100.000MGP_CAROLIEiJ_G0029150U2af2100100.000Mus_caroli
ENSCGRG00001003185-100100.000ENSMUSG00000030435U2af2100100.000Mus_musculus
ENSCGRG00001003185-100100.000MGP_PahariEiJ_G0021017U2af2100100.000Mus_pahari
ENSCGRG00001003185-100100.000MGP_SPRETEiJ_G0030203U2af2100100.000Mus_spretus
ENSCGRG00001003185-10099.158ENSMPUG00000007135U2AF210099.158Mustela_putorius_furo
ENSCGRG00001003185-5196.266ENSMLUG00000011051-10096.266Myotis_lucifugus
ENSCGRG00001003185-10099.789ENSNGAG00000020369U2af210099.789Nannospalax_galili
ENSCGRG00001003185-9674.732ENSNBRG00000011100-8978.177Neolamprologus_brichardi
ENSCGRG00001003185-10090.213ENSNBRG00000002568u2af2a10089.787Neolamprologus_brichardi
ENSCGRG00001003185-10081.761ENSNLEG00000010562U2AF2100100.000Nomascus_leucogenys
ENSCGRG00001003185-8684.184ENSMEUG00000002346U2AF29082.809Notamacropus_eugenii
ENSCGRG00001003185-10094.947ENSODEG00000012729-10094.947Octodon_degus
ENSCGRG00001003185-9969.978ENSODEG00000009254-10069.492Octodon_degus
ENSCGRG00001003185-9975.949ENSONIG00000009682-10074.145Oreochromis_niloticus
ENSCGRG00001003185-10089.641ENSONIG00000012793u2af2a10088.889Oreochromis_niloticus
ENSCGRG00001003185-10087.660ENSORLG00000011545u2af2a10086.809Oryzias_latipes
ENSCGRG00001003185-10087.660ENSORLG00020006941u2af2a10086.809Oryzias_latipes_hni
ENSCGRG00001003185-10087.660ENSORLG00015012843u2af2a10086.809Oryzias_latipes_hsok
ENSCGRG00001003185-10089.339ENSOMEG00000011386u2af2a10089.126Oryzias_melastigma
ENSCGRG00001003185-9856.926ENSOGAG00000034729-8063.978Otolemur_garnettii
ENSCGRG00001003185-10099.789ENSOGAG00000007206-10099.789Otolemur_garnettii
ENSCGRG00001003185-10088.260ENSOARG00000001091U2AF210088.260Ovis_aries
ENSCGRG00001003185-10099.789ENSPPAG00000039782U2AF210099.789Pan_paniscus
ENSCGRG00001003185-10099.789ENSPPRG00000013843U2AF210099.789Panthera_pardus
ENSCGRG00001003185-9986.412ENSPTIG00000005489U2AF29093.478Panthera_tigris_altaica
ENSCGRG00001003185-10099.789ENSPTRG00000011523U2AF2100100.000Pan_troglodytes
ENSCGRG00001003185-10099.158ENSPANG00000008459U2AF210099.158Papio_anubis
ENSCGRG00001003185-9976.891ENSPKIG00000014878-10074.145Paramormyrops_kingsleyae
ENSCGRG00001003185-10088.445ENSPKIG00000024346u2af2b9095.396Paramormyrops_kingsleyae
ENSCGRG00001003185-9775.745ENSPSIG00000008014U2AF210075.745Pelodiscus_sinensis
ENSCGRG00001003185-9684.444ENSPMGG00000022980u2af2a9284.173Periophthalmus_magnuspinnatus
ENSCGRG00001003185-100100.000ENSPEMG00000007378U2af2100100.000Peromyscus_maniculatus_bairdii
ENSCGRG00001003185-8378.125ENSPMAG00000004097u2af2a8778.358Petromyzon_marinus
ENSCGRG00001003185-10098.737ENSPCIG00000018013U2AF210098.737Phascolarctos_cinereus
ENSCGRG00001003185-9989.339ENSPFOG00000010799u2af2a10089.339Poecilia_formosa
ENSCGRG00001003185-9975.758ENSPFOG00000006433-10073.536Poecilia_formosa
ENSCGRG00001003185-9377.494ENSPLAG00000003275-8979.902Poecilia_latipinna
ENSCGRG00001003185-10091.485ENSPLAG00000014365u2af2a10091.485Poecilia_latipinna
ENSCGRG00001003185-10091.485ENSPMEG00000002969u2af2a10091.485Poecilia_mexicana
ENSCGRG00001003185-9377.262ENSPMEG00000003734-8979.657Poecilia_mexicana
ENSCGRG00001003185-9974.473ENSPREG00000013036-10075.676Poecilia_reticulata
ENSCGRG00001003185-10089.362ENSPREG00000008739u2af2a10089.362Poecilia_reticulata
ENSCGRG00001003185-9297.834ENSPPYG00000010429-9596.751Pongo_abelii
ENSCGRG00001003185-10083.403ENSPCAG00000014399-10083.403Procavia_capensis
ENSCGRG00001003185-8683.673ENSPCAG00000003709-9981.463Procavia_capensis
ENSCGRG00001003185-10099.789ENSPCOG00000025870U2AF210099.789Propithecus_coquereli
ENSCGRG00001003185-10099.368ENSPVAG00000004540U2AF210099.368Pteropus_vampyrus
ENSCGRG00001003185-9975.949ENSPNYG00000011605-10074.145Pundamilia_nyererei
ENSCGRG00001003185-10090.213ENSPNYG00000001438u2af2a10089.787Pundamilia_nyererei
ENSCGRG00001003185-9990.132ENSPNAG00000027289u2af2b9989.912Pygocentrus_nattereri
ENSCGRG00001003185-10088.121ENSPNAG00000017620u2af2a10088.769Pygocentrus_nattereri
ENSCGRG00001003185-9976.160ENSPNAG00000007182-10074.359Pygocentrus_nattereri
ENSCGRG00001003185-10099.158ENSRNOG00000015914U2af210099.158Rattus_norvegicus
ENSCGRG00001003185-10099.579ENSRBIG00000041018U2AF210099.579Rhinopithecus_bieti
ENSCGRG00001003185-8799.517ENSRROG00000031103-10099.517Rhinopithecus_roxellana
ENSCGRG00001003185-10093.684ENSRROG00000031238-10093.684Rhinopithecus_roxellana
ENSCGRG00001003185-10099.158ENSSBOG00000023891U2AF210099.158Saimiri_boliviensis_boliviensis
ENSCGRG00001003185-5382.517ENSSHAG00000001167U2AF28577.898Sarcophilus_harrisii
ENSCGRG00001003185-9976.546ENSSFOG00015003884-9382.171Scleropages_formosus
ENSCGRG00001003185-8794.207ENSSFOG00015019182u2af2b8894.629Scleropages_formosus
ENSCGRG00001003185-10090.632ENSSMAG00000012582u2af2a10090.632Scophthalmus_maximus
ENSCGRG00001003185-9976.333ENSSMAG00000013779-10074.145Scophthalmus_maximus
ENSCGRG00001003185-9674.414ENSSDUG00000021434-8477.804Seriola_dumerili
ENSCGRG00001003185-9991.466ENSSDUG00000009457u2af2a10091.466Seriola_dumerili
ENSCGRG00001003185-9674.414ENSSLDG00000016151-8977.804Seriola_lalandi_dorsalis
ENSCGRG00001003185-10091.485ENSSLDG00000022742u2af2a10091.485Seriola_lalandi_dorsalis
ENSCGRG00001003185-10095.359ENSSPUG00000010229U2AF210095.359Sphenodon_punctatus
ENSCGRG00001003185-9975.738ENSSPAG00000005241-10073.932Stegastes_partitus
ENSCGRG00001003185-10090.000ENSSPAG00000022519u2af2a10089.574Stegastes_partitus
ENSCGRG00001003185-100100.000ENSSSCG00000034815U2AF2100100.000Sus_scrofa
ENSCGRG00001003185-9689.569ENSTRUG00000005514u2af2a9089.926Takifugu_rubripes
ENSCGRG00001003185-10089.765ENSTNIG00000008106U2AF210089.765Tetraodon_nigroviridis
ENSCGRG00001003185-9974.837ENSTNIG00000011257-10075.922Tetraodon_nigroviridis
ENSCGRG00001003185-7894.865ENSTBEG00000009104U2AF210094.865Tupaia_belangeri
ENSCGRG00001003185-10099.789ENSTTRG00000000987U2AF210099.789Tursiops_truncatus
ENSCGRG00001003185-9696.718ENSUAMG00000019883U2AF210096.718Ursus_americanus
ENSCGRG00001003185-9696.718ENSUMAG00000024586U2AF2100100.000Ursus_maritimus
ENSCGRG00001003185-9799.129ENSVVUG00000006956U2AF26799.129Vulpes_vulpes
ENSCGRG00001003185-10096.344ENSXETG00000019128u2af210096.344Xenopus_tropicalis
ENSCGRG00001003185-8595.373ENSXCOG00000019406u2af2a9292.383Xiphophorus_couchianus
ENSCGRG00001003185-10091.485ENSXMAG00000011979u2af2a10091.485Xiphophorus_maculatus
ENSCGRG00001003185-9975.738ENSXMAG00000000768-9673.291Xiphophorus_maculatus

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