EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001003473 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: P15|Pc4|Rpo2tc1
Full Name: SUB1 homolog%2C transcriptional regulator
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 10537 bases
Position: chrscaffold_0:108356454-108366990
Accession: 100773803
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001002991	PC4	PF02229.16	2.4e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001004178	-	384	-	ENSCGRP00001002991	127 (aa)	XP_007618305	UPI00022F4BFD

Gene Model

Click here to download ENSCGRG00001003473's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001003473's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001003473	-	100	81.102	ENSCGRG00001016254	-	100	81.102
ENSCGRG00001003473	-	100	82.677	ENSCGRG00001014660	-	100	82.677

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001003473	-	100	94.488	ENSG00000113387	SUB1	100	94.488	Homo_sapiens
ENSCGRG00001003473	-	100	69.291	ENSAPOG00000005917	SUB1	100	65.354	Acanthochromis_polyacanthus
ENSCGRG00001003473	-	100	94.488	ENSAMEG00000006238	SUB1	95	94.488	Ailuropoda_melanoleuca
ENSCGRG00001003473	-	100	70.866	ENSACIG00000015976	sub1b	100	66.929	Amphilophus_citrinellus
ENSCGRG00001003473	-	85	68.519	ENSAOCG00000002323	-	75	71.739	Amphiprion_ocellaris
ENSCGRG00001003473	-	91	66.379	ENSAOCG00000007313	-	82	71.569	Amphiprion_ocellaris
ENSCGRG00001003473	-	100	71.654	ENSAPEG00000024347	sub1b	100	67.717	Amphiprion_percula
ENSCGRG00001003473	-	51	67.692	ENSAPEG00000014618	-	62	67.692	Amphiprion_percula
ENSCGRG00001003473	-	87	64.286	ENSAPEG00000017151	-	71	71.739	Amphiprion_percula
ENSCGRG00001003473	-	100	71.654	ENSATEG00000010340	sub1b	100	67.717	Anabas_testudineus
ENSCGRG00001003473	-	100	77.612	ENSACAG00000007974	SUB1	100	77.612	Anolis_carolinensis
ENSCGRG00001003473	-	100	90.551	ENSANAG00000023392	-	83	89.764	Aotus_nancymaae
ENSCGRG00001003473	-	100	94.488	ENSANAG00000011651	-	100	94.488	Aotus_nancymaae
ENSCGRG00001003473	-	100	72.441	ENSACLG00000016875	sub1b	64	68.504	Astatotilapia_calliptera
ENSCGRG00001003473	-	100	75.591	ENSAMXG00000037104	sub1b	100	71.654	Astyanax_mexicanus
ENSCGRG00001003473	-	100	94.488	ENSBTAG00000021965	SUB1	100	94.488	Bos_taurus
ENSCGRG00001003473	-	80	94.118	ENSCJAG00000018718	SUB1	98	94.118	Callithrix_jacchus
ENSCGRG00001003473	-	100	94.488	ENSCAFG00000018879	-	88	94.488	Canis_familiaris
ENSCGRG00001003473	-	100	94.488	ENSCAFG00000016713	-	96	94.488	Canis_familiaris
ENSCGRG00001003473	-	91	91.304	ENSCAFG00000024488	-	86	90.741	Canis_familiaris
ENSCGRG00001003473	-	100	92.188	ENSCAFG00020011479	-	77	92.188	Canis_lupus_dingo
ENSCGRG00001003473	-	100	94.488	ENSCAFG00020016840	-	100	94.488	Canis_lupus_dingo
ENSCGRG00001003473	-	100	94.488	ENSCHIG00000008460	SUB1	100	94.488	Capra_hircus
ENSCGRG00001003473	-	100	86.923	ENSTSYG00000014069	-	93	86.923	Carlito_syrichta
ENSCGRG00001003473	-	100	82.677	ENSTSYG00000035366	-	83	82.677	Carlito_syrichta
ENSCGRG00001003473	-	100	94.488	ENSTSYG00000029948	-	100	94.488	Carlito_syrichta
ENSCGRG00001003473	-	100	94.488	ENSCPOG00000031334	SUB1	100	94.488	Cavia_porcellus
ENSCGRG00001003473	-	100	87.402	ENSCCAG00000017043	-	93	87.402	Cebus_capucinus
ENSCGRG00001003473	-	100	89.764	ENSCCAG00000020604	-	100	89.764	Cebus_capucinus
ENSCGRG00001003473	-	100	94.488	ENSCCAG00000023605	-	100	94.488	Cebus_capucinus
ENSCGRG00001003473	-	100	90.551	ENSCCAG00000033751	-	95	90.551	Cebus_capucinus
ENSCGRG00001003473	-	100	94.488	ENSCATG00000031199	SUB1	100	94.488	Cercocebus_atys
ENSCGRG00001003473	-	100	93.750	ENSCLAG00000007522	SUB1	100	92.188	Chinchilla_lanigera
ENSCGRG00001003473	-	100	94.488	ENSCSAG00000017172	-	100	94.488	Chlorocebus_sabaeus
ENSCGRG00001003473	-	100	90.551	ENSCSAG00000019449	-	100	90.551	Chlorocebus_sabaeus
ENSCGRG00001003473	-	100	87.402	ENSCPBG00000024218	SUB1	79	85.039	Chrysemys_picta_bellii
ENSCGRG00001003473	-	100	94.488	ENSCANG00000029372	SUB1	100	94.488	Colobus_angolensis_palliatus
ENSCGRG00001003473	-	100	74.016	ENSCANG00000028665	-	90	74.016	Colobus_angolensis_palliatus
ENSCGRG00001003473	-	100	100.000	ENSCGRG00000001133	-	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001003473	-	100	82.677	ENSCGRG00000019368	-	100	82.677	Cricetulus_griseus_crigri
ENSCGRG00001003473	-	100	84.252	ENSCGRG00000001489	-	100	84.252	Cricetulus_griseus_crigri
ENSCGRG00001003473	-	100	70.866	ENSDARG00000007720	sub1b	100	67.717	Danio_rerio
ENSCGRG00001003473	-	99	74.603	ENSDARG00000053446	sub1a	100	73.228	Danio_rerio
ENSCGRG00001003473	-	100	91.339	ENSDNOG00000032396	-	100	91.339	Dasypus_novemcinctus
ENSCGRG00001003473	-	100	92.126	ENSDNOG00000040794	-	100	92.126	Dasypus_novemcinctus
ENSCGRG00001003473	-	100	93.701	ENSDORG00000013916	Sub1	100	93.701	Dipodomys_ordii
ENSCGRG00001003473	-	100	94.488	ENSEASG00005007099	SUB1	100	94.488	Equus_asinus_asinus
ENSCGRG00001003473	-	100	94.488	ENSECAG00000012399	SUB1	100	94.488	Equus_caballus
ENSCGRG00001003473	-	81	93.204	ENSEEUG00000000436	SUB1	100	93.204	Erinaceus_europaeus
ENSCGRG00001003473	-	100	94.488	ENSFCAG00000037288	SUB1	100	94.488	Felis_catus
ENSCGRG00001003473	-	100	86.614	ENSFALG00000002143	SUB1	87	86.614	Ficedula_albicollis
ENSCGRG00001003473	-	100	94.488	ENSFDAG00000017179	SUB1	100	94.488	Fukomys_damarensis
ENSCGRG00001003473	-	100	85.039	ENSGALG00000034905	-	100	85.039	Gallus_gallus
ENSCGRG00001003473	-	100	86.614	ENSGALG00000003248	SUB1	100	86.614	Gallus_gallus
ENSCGRG00001003473	-	100	51.969	ENSGALG00000027147	-	100	52.756	Gallus_gallus
ENSCGRG00001003473	-	100	71.654	ENSGACG00000003912	sub1b	100	66.929	Gasterosteus_aculeatus
ENSCGRG00001003473	-	100	87.402	ENSGAGG00000013535	SUB1	100	87.402	Gopherus_agassizii
ENSCGRG00001003473	-	100	94.488	ENSGGOG00000040900	SUB1	100	94.488	Gorilla_gorilla
ENSCGRG00001003473	-	82	70.192	ENSHBUG00000013953	sub1b	77	70.192	Haplochromis_burtoni
ENSCGRG00001003473	-	100	94.488	ENSHGLG00000006749	SUB1	100	94.488	Heterocephalus_glaber_female
ENSCGRG00001003473	-	100	94.488	ENSHGLG00100014344	SUB1	100	94.488	Heterocephalus_glaber_male
ENSCGRG00001003473	-	100	67.717	ENSHCOG00000001809	sub1b	100	62.205	Hippocampus_comes
ENSCGRG00001003473	-	100	70.079	ENSIPUG00000008166	sub1	100	66.142	Ictalurus_punctatus
ENSCGRG00001003473	-	100	70.543	ENSIPUG00000024367	SUB1	100	66.667	Ictalurus_punctatus
ENSCGRG00001003473	-	100	95.276	ENSSTOG00000019364	SUB1	100	95.276	Ictidomys_tridecemlineatus
ENSCGRG00001003473	-	100	89.764	ENSJJAG00000018885	Sub1	100	89.764	Jaculus_jaculus
ENSCGRG00001003473	-	99	69.048	ENSLBEG00000010728	sub1b	100	66.142	Labrus_bergylta
ENSCGRG00001003473	-	51	87.692	ENSLACG00000001068	SUB1	100	87.692	Latimeria_chalumnae
ENSCGRG00001003473	-	100	76.378	ENSLOCG00000006692	sub1b	100	73.228	Lepisosteus_oculatus
ENSCGRG00001003473	-	100	93.701	ENSLAFG00000011006	-	100	93.701	Loxodonta_africana
ENSCGRG00001003473	-	100	93.701	ENSLAFG00000032088	-	100	93.701	Loxodonta_africana
ENSCGRG00001003473	-	100	86.614	ENSMFAG00000045643	-	61	86.614	Macaca_fascicularis
ENSCGRG00001003473	-	100	94.488	ENSMFAG00000040728	SUB1	100	94.488	Macaca_fascicularis
ENSCGRG00001003473	-	100	94.488	ENSMMUG00000046181	SUB1	100	94.488	Macaca_mulatta
ENSCGRG00001003473	-	100	94.488	ENSMNEG00000037046	SUB1	100	94.488	Macaca_nemestrina
ENSCGRG00001003473	-	100	73.228	ENSMLEG00000043436	-	90	73.228	Mandrillus_leucophaeus
ENSCGRG00001003473	-	100	92.126	ENSMLEG00000030509	-	94	92.126	Mandrillus_leucophaeus
ENSCGRG00001003473	-	100	94.488	ENSMLEG00000037017	-	100	94.488	Mandrillus_leucophaeus
ENSCGRG00001003473	-	100	69.291	ENSMAMG00000018428	sub1b	100	65.354	Mastacembelus_armatus
ENSCGRG00001003473	-	100	70.866	ENSMZEG00005021252	sub1b	100	66.929	Maylandia_zebra
ENSCGRG00001003473	-	100	49.606	ENSMGAG00000001200	-	95	49.606	Meleagris_gallopavo
ENSCGRG00001003473	-	100	86.614	ENSMGAG00000002906	SUB1	100	86.614	Meleagris_gallopavo
ENSCGRG00001003473	-	100	100.000	ENSMAUG00000020232	Sub1	100	100.000	Mesocricetus_auratus
ENSCGRG00001003473	-	100	94.488	ENSMICG00000014535	SUB1	100	94.488	Microcebus_murinus
ENSCGRG00001003473	-	100	85.827	ENSMOCG00000016424	-	100	85.827	Microtus_ochrogaster
ENSCGRG00001003473	-	100	99.213	ENSMOCG00000018930	-	100	99.213	Microtus_ochrogaster
ENSCGRG00001003473	-	100	80.714	ENSMODG00000020410	SUB1	100	80.714	Monodelphis_domestica
ENSCGRG00001003473	-	100	70.866	ENSMALG00000007163	sub1b	81	72.441	Monopterus_albus
ENSCGRG00001003473	-	100	100.000	MGP_CAROLIEiJ_G0019676	Sub1	100	100.000	Mus_caroli
ENSCGRG00001003473	-	100	99.213	ENSMUSG00000022205	Sub1	100	99.213	Mus_musculus
ENSCGRG00001003473	-	100	99.213	MGP_PahariEiJ_G0016056	Sub1	100	99.213	Mus_pahari
ENSCGRG00001003473	-	100	99.213	MGP_SPRETEiJ_G0020573	Sub1	100	99.213	Mus_spretus
ENSCGRG00001003473	-	100	93.701	ENSMPUG00000018418	-	100	93.701	Mustela_putorius_furo
ENSCGRG00001003473	-	100	94.488	ENSMPUG00000015185	-	100	94.488	Mustela_putorius_furo
ENSCGRG00001003473	-	100	93.701	ENSMLUG00000013685	-	95	93.701	Myotis_lucifugus
ENSCGRG00001003473	-	100	89.764	ENSMLUG00000009236	-	95	89.764	Myotis_lucifugus
ENSCGRG00001003473	-	100	87.402	ENSNGAG00000017212	-	100	87.402	Nannospalax_galili
ENSCGRG00001003473	-	100	96.063	ENSNGAG00000010782	-	84	96.063	Nannospalax_galili
ENSCGRG00001003473	-	100	99.213	ENSNGAG00000014072	-	100	99.213	Nannospalax_galili
ENSCGRG00001003473	-	82	69.231	ENSNBRG00000008451	sub1b	84	69.231	Neolamprologus_brichardi
ENSCGRG00001003473	-	100	88.976	ENSNLEG00000035968	-	100	88.976	Nomascus_leucogenys
ENSCGRG00001003473	-	100	93.701	ENSNLEG00000036068	SUB1	100	93.701	Nomascus_leucogenys
ENSCGRG00001003473	-	100	93.701	ENSNLEG00000018383	-	95	93.701	Nomascus_leucogenys
ENSCGRG00001003473	-	100	88.189	ENSMEUG00000007770	SUB1	100	88.189	Notamacropus_eugenii
ENSCGRG00001003473	-	100	92.913	ENSOPRG00000012887	SUB1	100	92.913	Ochotona_princeps
ENSCGRG00001003473	-	100	94.488	ENSODEG00000001937	-	100	94.488	Octodon_degus
ENSCGRG00001003473	-	85	90.741	ENSODEG00000015114	-	98	90.984	Octodon_degus
ENSCGRG00001003473	-	100	89.764	ENSODEG00000014558	-	84	89.764	Octodon_degus
ENSCGRG00001003473	-	100	88.976	ENSOANG00000002328	SUB1	95	88.976	Ornithorhynchus_anatinus
ENSCGRG00001003473	-	100	92.126	ENSOCUG00000006262	SUB1	60	92.126	Oryctolagus_cuniculus
ENSCGRG00001003473	-	98	93.548	ENSOGAG00000000337	-	100	93.548	Otolemur_garnettii
ENSCGRG00001003473	-	100	94.488	ENSOGAG00000009012	-	100	94.488	Otolemur_garnettii
ENSCGRG00001003473	-	100	94.488	ENSOARG00000012154	SUB1	100	94.488	Ovis_aries
ENSCGRG00001003473	-	100	94.488	ENSPPAG00000011212	SUB1	100	94.488	Pan_paniscus
ENSCGRG00001003473	-	100	94.488	ENSPPRG00000008557	SUB1	100	94.488	Panthera_pardus
ENSCGRG00001003473	-	100	94.488	ENSPTIG00000009466	SUB1	100	94.488	Panthera_tigris_altaica
ENSCGRG00001003473	-	100	94.488	ENSPTRG00000048895	SUB1	100	94.488	Pan_troglodytes
ENSCGRG00001003473	-	100	88.189	ENSPTRG00000041644	-	100	88.189	Pan_troglodytes
ENSCGRG00001003473	-	100	94.488	ENSPANG00000000339	-	97	94.488	Papio_anubis
ENSCGRG00001003473	-	100	73.228	ENSPANG00000033272	-	90	73.228	Papio_anubis
ENSCGRG00001003473	-	100	92.126	ENSPANG00000000672	-	91	92.126	Papio_anubis
ENSCGRG00001003473	-	100	94.488	ENSPANG00000002644	-	95	94.488	Papio_anubis
ENSCGRG00001003473	-	100	88.189	ENSPANG00000035601	-	100	88.189	Papio_anubis
ENSCGRG00001003473	-	100	74.016	ENSPKIG00000016923	sub1b	100	68.504	Paramormyrops_kingsleyae
ENSCGRG00001003473	-	100	88.189	ENSPSIG00000005731	SUB1	95	88.189	Pelodiscus_sinensis
ENSCGRG00001003473	-	100	77.953	ENSPCIG00000020827	-	100	77.953	Phascolarctos_cinereus
ENSCGRG00001003473	-	100	88.189	ENSPCIG00000020907	-	100	88.189	Phascolarctos_cinereus
ENSCGRG00001003473	-	100	94.488	ENSPPYG00000015379	SUB1	100	94.488	Pongo_abelii
ENSCGRG00001003473	-	100	88.976	ENSPPYG00000018347	-	100	88.976	Pongo_abelii
ENSCGRG00001003473	-	100	94.488	ENSPCOG00000014391	SUB1	100	94.488	Propithecus_coquereli
ENSCGRG00001003473	-	100	94.488	ENSPVAG00000004785	SUB1	100	94.488	Pteropus_vampyrus
ENSCGRG00001003473	-	100	70.866	ENSPNYG00000010975	sub1b	100	66.929	Pundamilia_nyererei
ENSCGRG00001003473	-	100	72.441	ENSPNAG00000008693	sub1a	100	68.504	Pygocentrus_nattereri
ENSCGRG00001003473	-	99	75.397	ENSPNAG00000005998	sub1b	99	71.429	Pygocentrus_nattereri
ENSCGRG00001003473	-	100	99.213	ENSRNOG00000050563	Sub1	100	99.213	Rattus_norvegicus
ENSCGRG00001003473	-	100	88.189	ENSRBIG00000031233	SUB1	100	88.189	Rhinopithecus_bieti
ENSCGRG00001003473	-	100	94.488	ENSRROG00000040438	SUB1	100	94.488	Rhinopithecus_roxellana
ENSCGRG00001003473	-	100	81.890	ENSRROG00000042718	-	90	81.890	Rhinopithecus_roxellana
ENSCGRG00001003473	-	100	94.488	ENSSBOG00000026994	SUB1	100	94.488	Saimiri_boliviensis_boliviensis
ENSCGRG00001003473	-	100	88.189	ENSSHAG00000014986	SUB1	100	88.189	Sarcophilus_harrisii
ENSCGRG00001003473	-	100	73.228	ENSSFOG00015017283	sub1b	100	68.504	Scleropages_formosus
ENSCGRG00001003473	-	100	74.803	ENSSFOG00015018386	sub1b	100	74.803	Scleropages_formosus
ENSCGRG00001003473	-	100	72.441	ENSSMAG00000000313	sub1b	100	66.929	Scophthalmus_maximus
ENSCGRG00001003473	-	100	71.654	ENSSDUG00000013854	sub1b	76	71.654	Seriola_dumerili
ENSCGRG00001003473	-	100	71.654	ENSSLDG00000000852	sub1b	100	66.142	Seriola_lalandi_dorsalis
ENSCGRG00001003473	-	100	86.614	ENSSPUG00000016817	SUB1	100	86.614	Sphenodon_punctatus
ENSCGRG00001003473	-	100	71.654	ENSSPAG00000019363	sub1b	100	66.142	Stegastes_partitus
ENSCGRG00001003473	-	100	94.488	ENSSSCG00000032650	-	100	94.488	Sus_scrofa
ENSCGRG00001003473	-	100	94.488	ENSSSCG00000040294	-	87	94.488	Sus_scrofa
ENSCGRG00001003473	-	100	85.039	ENSTGUG00000001918	SUB1	100	85.039	Taeniopygia_guttata
ENSCGRG00001003473	-	100	68.504	ENSTRUG00000024420	sub1b	100	64.567	Takifugu_rubripes
ENSCGRG00001003473	-	100	64.567	ENSTNIG00000002700	sub1b	100	63.780	Tetraodon_nigroviridis
ENSCGRG00001003473	-	100	88.976	ENSTBEG00000001790	-	100	88.976	Tupaia_belangeri
ENSCGRG00001003473	-	99	85.714	ENSTBEG00000015821	-	100	85.714	Tupaia_belangeri
ENSCGRG00001003473	-	100	93.701	ENSTBEG00000006504	-	100	93.701	Tupaia_belangeri
ENSCGRG00001003473	-	100	88.189	ENSTBEG00000011247	-	99	88.189	Tupaia_belangeri
ENSCGRG00001003473	-	100	92.913	ENSTBEG00000004053	-	100	92.913	Tupaia_belangeri
ENSCGRG00001003473	-	100	88.976	ENSTBEG00000012861	-	100	88.976	Tupaia_belangeri
ENSCGRG00001003473	-	81	94.175	ENSTTRG00000017324	SUB1	100	94.175	Tursiops_truncatus
ENSCGRG00001003473	-	100	94.488	ENSUAMG00000000182	SUB1	100	94.488	Ursus_americanus
ENSCGRG00001003473	-	100	94.488	ENSUMAG00000013792	SUB1	100	94.488	Ursus_maritimus
ENSCGRG00001003473	-	100	86.614	ENSVPAG00000011012	SUB1	100	86.614	Vicugna_pacos
ENSCGRG00001003473	-	100	94.488	ENSVVUG00000022166	-	100	94.488	Vulpes_vulpes
ENSCGRG00001003473	-	89	86.726	ENSVVUG00000025193	-	92	89.091	Vulpes_vulpes
ENSCGRG00001003473	-	100	78.295	ENSXETG00000027218	sub1	100	78.295	Xenopus_tropicalis