EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00001003507 (Gene tree)
Gene ID: -
Gene Symbol: Mbd4
Alias: Med1
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 12342 bases
Position: chrscaffold_24:24963970-24976311
Accession: 100772468
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001003011	MBD	PF01429.19	1.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001004208	-	3814	XM_003507354	ENSCGRP00001003011	560 (aa)	XP_003507402	G3HVL7

Gene Model

Click here to download ENSCGRG00001003507's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001003507's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001003507	Mbd4	100	67.304	ENSG00000129071	MBD4	98	94.086	Homo_sapiens
ENSCGRG00001003507	Mbd4	86	43.737	ENSAPOG00000021668	mbd4	94	43.326	Acanthochromis_polyacanthus
ENSCGRG00001003507	Mbd4	100	66.373	ENSAMEG00000004562	MBD4	99	65.845	Ailuropoda_melanoleuca
ENSCGRG00001003507	Mbd4	100	64.261	ENSBTAG00000021645	MBD4	100	63.732	Bos_taurus
ENSCGRG00001003507	Mbd4	100	66.608	ENSCJAG00000017293	MBD4	99	66.608	Callithrix_jacchus
ENSCGRG00001003507	Mbd4	100	66.842	ENSCAFG00000004867	MBD4	99	65.965	Canis_familiaris
ENSCGRG00001003507	Mbd4	100	66.842	ENSCAFG00020007082	MBD4	99	65.965	Canis_lupus_dingo
ENSCGRG00001003507	Mbd4	100	63.908	ENSCHIG00000009760	MBD4	100	63.380	Capra_hircus
ENSCGRG00001003507	Mbd4	100	66.202	ENSCCAG00000029796	MBD4	99	65.854	Cebus_capucinus
ENSCGRG00001003507	Mbd4	100	67.483	ENSCATG00000035211	MBD4	99	67.483	Cercocebus_atys
ENSCGRG00001003507	Mbd4	100	64.035	ENSCLAG00000008974	MBD4	100	63.860	Chinchilla_lanigera
ENSCGRG00001003507	Mbd4	100	68.182	ENSCSAG00000009037	MBD4	99	68.182	Chlorocebus_sabaeus
ENSCGRG00001003507	Mbd4	94	48.410	ENSCPBG00000014704	MBD4	98	48.410	Chrysemys_picta_bellii
ENSCGRG00001003507	Mbd4	100	67.657	ENSCANG00000007120	MBD4	99	67.657	Colobus_angolensis_palliatus
ENSCGRG00001003507	Mbd4	100	100.000	ENSCGRG00000010974	Mbd4	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001003507	Mbd4	100	64.737	ENSDNOG00000049619	MBD4	100	64.386	Dasypus_novemcinctus
ENSCGRG00001003507	Mbd4	81	56.710	ENSDORG00000000902	-	95	56.710	Dipodomys_ordii
ENSCGRG00001003507	Mbd4	100	68.301	ENSEASG00005014800	MBD4	100	68.301	Equus_asinus_asinus
ENSCGRG00001003507	Mbd4	100	68.126	ENSECAG00000022106	MBD4	100	68.126	Equus_caballus
ENSCGRG00001003507	Mbd4	88	60.594	ENSEEUG00000011459	MBD4	94	60.000	Erinaceus_europaeus
ENSCGRG00001003507	Mbd4	100	66.257	ENSFCAG00000000083	MBD4	99	65.905	Felis_catus
ENSCGRG00001003507	Mbd4	83	46.721	ENSFALG00000013663	MBD4	99	46.627	Ficedula_albicollis
ENSCGRG00001003507	Mbd4	50	51.786	ENSGACG00000001970	-	65	51.786	Gasterosteus_aculeatus
ENSCGRG00001003507	Mbd4	94	49.296	ENSGAGG00000018644	MBD4	98	49.037	Gopherus_agassizii
ENSCGRG00001003507	Mbd4	100	66.609	ENSGGOG00000010698	MBD4	99	66.609	Gorilla_gorilla
ENSCGRG00001003507	Mbd4	100	65.499	ENSHGLG00000009034	MBD4	100	65.324	Heterocephalus_glaber_female
ENSCGRG00001003507	Mbd4	100	65.499	ENSHGLG00100000135	MBD4	100	65.324	Heterocephalus_glaber_male
ENSCGRG00001003507	Mbd4	100	65.035	ENSSTOG00000020663	MBD4	100	65.035	Ictidomys_tridecemlineatus
ENSCGRG00001003507	Mbd4	99	66.146	ENSLAFG00000010609	MBD4	99	65.972	Loxodonta_africana
ENSCGRG00001003507	Mbd4	99	67.426	ENSMFAG00000002266	MBD4	99	67.426	Macaca_fascicularis
ENSCGRG00001003507	Mbd4	99	66.899	ENSMMUG00000012723	MBD4	99	66.899	Macaca_mulatta
ENSCGRG00001003507	Mbd4	96	65.814	ENSMNEG00000029752	MBD4	99	65.814	Macaca_nemestrina
ENSCGRG00001003507	Mbd4	100	67.483	ENSMLEG00000024859	MBD4	99	67.483	Mandrillus_leucophaeus
ENSCGRG00001003507	Mbd4	100	67.478	ENSMICG00000008022	MBD4	99	67.304	Microcebus_murinus
ENSCGRG00001003507	Mbd4	68	70.312	ENSMOCG00000002466	-	98	70.312	Microtus_ochrogaster
ENSCGRG00001003507	Mbd4	86	56.400	ENSMODG00000006399	-	98	56.400	Monodelphis_domestica
ENSCGRG00001003507	Mbd4	100	77.032	MGP_CAROLIEiJ_G0028760	Mbd4	100	76.148	Mus_caroli
ENSCGRG00001003507	Mbd4	100	76.148	ENSMUSG00000030322	Mbd4	100	75.265	Mus_musculus
ENSCGRG00001003507	Mbd4	100	76.408	MGP_PahariEiJ_G0022511	-	100	76.056	Mus_pahari
ENSCGRG00001003507	Mbd4	100	75.442	MGP_SPRETEiJ_G0029788	Mbd4	100	74.735	Mus_spretus
ENSCGRG00001003507	Mbd4	100	67.487	ENSMPUG00000017195	MBD4	99	67.487	Mustela_putorius_furo
ENSCGRG00001003507	Mbd4	94	69.030	ENSMLUG00000014766	MBD4	99	68.470	Myotis_lucifugus
ENSCGRG00001003507	Mbd4	100	66.667	ENSNLEG00000005337	MBD4	99	66.667	Nomascus_leucogenys
ENSCGRG00001003507	Mbd4	100	59.408	ENSOPRG00000000473	MBD4	99	59.233	Ochotona_princeps
ENSCGRG00001003507	Mbd4	86	44.794	ENSONIG00000017212	mbd4	99	43.774	Oreochromis_niloticus
ENSCGRG00001003507	Mbd4	68	43.142	ENSOANG00000004589	-	89	43.250	Ornithorhynchus_anatinus
ENSCGRG00001003507	Mbd4	100	58.925	ENSOCUG00000013006	MBD4	99	58.925	Oryctolagus_cuniculus
ENSCGRG00001003507	Mbd4	100	63.573	ENSOGAG00000010236	MBD4	100	63.573	Otolemur_garnettii
ENSCGRG00001003507	Mbd4	100	64.437	ENSOARG00000014699	MBD4	100	63.908	Ovis_aries
ENSCGRG00001003507	Mbd4	100	66.725	ENSPPAG00000036528	MBD4	99	66.725	Pan_paniscus
ENSCGRG00001003507	Mbd4	100	66.197	ENSPPRG00000016480	MBD4	99	65.845	Panthera_pardus
ENSCGRG00001003507	Mbd4	100	66.783	ENSPTRG00000015377	MBD4	99	66.957	Pan_troglodytes
ENSCGRG00001003507	Mbd4	100	67.888	ENSPANG00000015047	MBD4	99	67.539	Papio_anubis
ENSCGRG00001003507	Mbd4	94	47.979	ENSPSIG00000007892	MBD4	96	47.979	Pelodiscus_sinensis
ENSCGRG00001003507	Mbd4	94	75.468	ENSPEMG00000006226	Mbd4	99	74.906	Peromyscus_maniculatus_bairdii
ENSCGRG00001003507	Mbd4	90	53.232	ENSPCIG00000002276	-	98	52.952	Phascolarctos_cinereus
ENSCGRG00001003507	Mbd4	100	67.714	ENSPPYG00000013417	MBD4	99	67.365	Pongo_abelii
ENSCGRG00001003507	Mbd4	96	61.496	ENSPCAG00000012915	MBD4	99	60.949	Procavia_capensis
ENSCGRG00001003507	Mbd4	100	69.177	ENSPVAG00000005238	MBD4	99	69.352	Pteropus_vampyrus
ENSCGRG00001003507	Mbd4	100	77.193	ENSRNOG00000010919	Mbd4	100	76.842	Rattus_norvegicus
ENSCGRG00001003507	Mbd4	100	67.483	ENSRBIG00000027722	MBD4	99	67.483	Rhinopithecus_bieti
ENSCGRG00001003507	Mbd4	100	67.308	ENSRROG00000029136	MBD4	99	67.308	Rhinopithecus_roxellana
ENSCGRG00001003507	Mbd4	100	66.084	ENSSBOG00000016810	MBD4	99	65.734	Saimiri_boliviensis_boliviensis
ENSCGRG00001003507	Mbd4	94	52.381	ENSSHAG00000012953	MBD4	94	50.998	Sarcophilus_harrisii
ENSCGRG00001003507	Mbd4	82	56.681	ENSSARG00000004496	-	80	56.466	Sorex_araneus
ENSCGRG00001003507	Mbd4	87	48.330	ENSSPUG00000017344	MBD4	91	47.195	Sphenodon_punctatus
ENSCGRG00001003507	Mbd4	100	68.007	ENSSSCG00000033303	MBD4	100	67.657	Sus_scrofa
ENSCGRG00001003507	Mbd4	86	44.075	ENSTRUG00000010124	mbd4	51	77.059	Takifugu_rubripes
ENSCGRG00001003507	Mbd4	86	62.385	ENSTBEG00000003041	-	85	62.385	Tupaia_belangeri
ENSCGRG00001003507	Mbd4	95	68.132	ENSTTRG00000011265	MBD4	98	67.766	Tursiops_truncatus
ENSCGRG00001003507	Mbd4	88	68.485	ENSUAMG00000000814	MBD4	100	68.485	Ursus_americanus
ENSCGRG00001003507	Mbd4	100	66.549	ENSUMAG00000017542	MBD4	100	66.549	Ursus_maritimus
ENSCGRG00001003507	Mbd4	65	64.744	ENSVPAG00000004040	-	63	64.744	Vicugna_pacos
ENSCGRG00001003507	Mbd4	100	67.193	ENSVVUG00000014222	MBD4	99	66.491	Vulpes_vulpes
ENSCGRG00001003507	Mbd4	86	46.074	ENSXETG00000026622	mbd4	89	45.661	Xenopus_tropicalis