EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00001003677 (Gene tree)
Gene ID: -
Gene Symbol: Sf1
Alias: CW17R|MZFM|WBP4|Zfp162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 13122 bases
Position: chrscaffold_9:42125825-42138946
Accession: 100760817
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001003130	KH_1	PF00013.29	2.3e-07	1	1
ENSCGRP00001003136	KH_1	PF00013.29	2.6e-07	1	1
ENSCGRP00001003138	KH_1	PF00013.29	2.8e-07	1	1
ENSCGRP00001003130	zf-CCHC	PF00098.23	0.00014	1	1
ENSCGRP00001003136	zf-CCHC	PF00098.23	0.00018	1	1
ENSCGRP00001003138	zf-CCHC	PF00098.23	0.00018	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001004425	-	1716	-	ENSCGRP00001003130	571 (aa)	XP_016835297	UPI0007DA63BD
ENSCGRT00001004433	-	1920	-	ENSCGRP00001003136	639 (aa)	-	UPI000359F8DE
ENSCGRT00001004439	-	1959	-	ENSCGRP00001003138	652 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001003677's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001003677's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001003677	Sf1	66	80.928	ENSAPOG00000012341	sf1	60	76.047	Acanthochromis_polyacanthus
ENSCGRG00001003677	Sf1	99	93.634	ENSAMEG00000017828	SF1	99	93.634	Ailuropoda_melanoleuca
ENSCGRG00001003677	Sf1	65	83.245	ENSACIG00000016514	sf1	62	78.282	Amphilophus_citrinellus
ENSCGRG00001003677	Sf1	66	80.412	ENSAOCG00000010934	sf1	61	76.047	Amphiprion_ocellaris
ENSCGRG00001003677	Sf1	66	80.412	ENSAPEG00000009498	sf1	61	76.047	Amphiprion_percula
ENSCGRG00001003677	Sf1	65	82.105	ENSATEG00000001894	sf1	60	77.488	Anabas_testudineus
ENSCGRG00001003677	Sf1	100	99.374	ENSANAG00000026664	-	100	99.374	Aotus_nancymaae
ENSCGRG00001003677	Sf1	96	86.765	ENSANAG00000022607	-	99	87.065	Aotus_nancymaae
ENSCGRG00001003677	Sf1	64	84.824	ENSACLG00000007633	sf1	61	78.177	Astatotilapia_calliptera
ENSCGRG00001003677	Sf1	64	86.096	ENSAMXG00000003630	sf1	50	79.462	Astyanax_mexicanus
ENSCGRG00001003677	Sf1	100	99.531	ENSBTAG00000001035	SF1	100	99.531	Bos_taurus
ENSCGRG00001003677	Sf1	100	99.531	ENSCJAG00000002780	SF1	100	99.531	Callithrix_jacchus
ENSCGRG00001003677	Sf1	100	94.640	ENSCAFG00000014239	SF1	100	94.640	Canis_familiaris
ENSCGRG00001003677	Sf1	100	99.531	ENSCAFG00020014381	SF1	100	99.531	Canis_lupus_dingo
ENSCGRG00001003677	Sf1	100	99.531	ENSCHIG00000025867	SF1	100	99.531	Capra_hircus
ENSCGRG00001003677	Sf1	53	98.566	ENSTSYG00000033618	SF1	88	100.000	Carlito_syrichta
ENSCGRG00001003677	Sf1	98	97.321	ENSCAPG00000010762	SF1	100	97.321	Cavia_aperea
ENSCGRG00001003677	Sf1	98	95.171	ENSCPOG00000012290	SF1	98	97.524	Cavia_porcellus
ENSCGRG00001003677	Sf1	100	79.969	ENSCCAG00000023781	-	90	87.229	Cebus_capucinus
ENSCGRG00001003677	Sf1	100	94.640	ENSCCAG00000037881	SF1	96	99.263	Cebus_capucinus
ENSCGRG00001003677	Sf1	100	99.531	ENSCATG00000011564	SF1	100	99.531	Cercocebus_atys
ENSCGRG00001003677	Sf1	83	99.055	ENSCSAG00000007258	SF1	97	99.055	Chlorocebus_sabaeus
ENSCGRG00001003677	Sf1	72	92.961	ENSCHOG00000006008	SF1	79	93.062	Choloepus_hoffmanni
ENSCGRG00001003677	Sf1	81	86.293	ENSCPBG00000023763	SF1	66	84.942	Chrysemys_picta_bellii
ENSCGRG00001003677	Sf1	54	67.093	ENSCING00000005564	-	72	61.667	Ciona_intestinalis
ENSCGRG00001003677	Sf1	78	54.622	ENSCSAVG00000009055	-	87	56.438	Ciona_savignyi
ENSCGRG00001003677	Sf1	100	99.531	ENSCANG00000042201	SF1	100	99.531	Colobus_angolensis_palliatus
ENSCGRG00001003677	Sf1	98	100.000	ENSCGRG00000001708	Sf1	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001003677	Sf1	69	78.818	ENSCSEG00000014375	sf1	57	76.077	Cynoglossus_semilaevis
ENSCGRG00001003677	Sf1	65	84.865	ENSCVAG00000001670	sf1	64	78.537	Cyprinodon_variegatus
ENSCGRG00001003677	Sf1	79	81.638	ENSDARG00000008188	sf1	72	79.021	Danio_rerio
ENSCGRG00001003677	Sf1	83	98.488	ENSDNOG00000001282	SF1	97	98.488	Dasypus_novemcinctus
ENSCGRG00001003677	Sf1	100	99.531	ENSDORG00000016334	Sf1	100	99.531	Dipodomys_ordii
ENSCGRG00001003677	Sf1	92	91.966	ENSETEG00000012830	SF1	82	90.940	Echinops_telfairi
ENSCGRG00001003677	Sf1	83	98.677	ENSEASG00005018272	SF1	97	98.677	Equus_asinus_asinus
ENSCGRG00001003677	Sf1	83	98.866	ENSECAG00000024544	SF1	97	98.866	Equus_caballus
ENSCGRG00001003677	Sf1	69	98.473	ENSEEUG00000001058	SF1	100	98.473	Erinaceus_europaeus
ENSCGRG00001003677	Sf1	65	81.963	ENSELUG00000013225	sf1	54	79.426	Esox_lucius
ENSCGRG00001003677	Sf1	100	94.640	ENSFCAG00000012231	SF1	100	94.640	Felis_catus
ENSCGRG00001003677	Sf1	98	97.500	ENSFDAG00000009833	SF1	100	97.500	Fukomys_damarensis
ENSCGRG00001003677	Sf1	66	80.670	ENSFHEG00000022656	sf1	61	76.334	Fundulus_heteroclitus
ENSCGRG00001003677	Sf1	66	84.416	ENSGAFG00000019284	sf1	78	80.476	Gambusia_affinis
ENSCGRG00001003677	Sf1	67	80.759	ENSGACG00000000826	sf1	68	77.014	Gasterosteus_aculeatus
ENSCGRG00001003677	Sf1	74	89.387	ENSGAGG00000021691	SF1	72	84.942	Gopherus_agassizii
ENSCGRG00001003677	Sf1	65	83.421	ENSHBUG00000011598	sf1	61	77.494	Haplochromis_burtoni
ENSCGRG00001003677	Sf1	100	97.548	ENSHGLG00000009541	SF1	100	97.548	Heterocephalus_glaber_female
ENSCGRG00001003677	Sf1	98	97.500	ENSHGLG00100013879	-	100	97.500	Heterocephalus_glaber_male
ENSCGRG00001003677	Sf1	68	88.736	ENSHGLG00100008076	-	87	86.806	Heterocephalus_glaber_male
ENSCGRG00001003677	Sf1	76	86.222	ENSHGLG00100008255	-	94	85.924	Heterocephalus_glaber_male
ENSCGRG00001003677	Sf1	66	81.606	ENSHCOG00000011388	sf1	58	76.998	Hippocampus_comes
ENSCGRG00001003677	Sf1	98	99.522	ENSSTOG00000009790	-	100	99.522	Ictidomys_tridecemlineatus
ENSCGRG00001003677	Sf1	98	82.028	ENSSTOG00000024353	-	98	82.562	Ictidomys_tridecemlineatus
ENSCGRG00001003677	Sf1	100	99.687	ENSJJAG00000011788	Sf1	100	99.687	Jaculus_jaculus
ENSCGRG00001003677	Sf1	67	82.908	ENSKMAG00000005854	sf1	63	77.518	Kryptolebias_marmoratus
ENSCGRG00001003677	Sf1	75	82.984	ENSLBEG00000019836	sf1	64	78.469	Labrus_bergylta
ENSCGRG00001003677	Sf1	73	78.333	ENSLACG00000018493	SF1	87	68.819	Latimeria_chalumnae
ENSCGRG00001003677	Sf1	65	85.146	ENSLOCG00000002130	sf1	59	80.296	Lepisosteus_oculatus
ENSCGRG00001003677	Sf1	99	98.137	ENSLAFG00000007201	SF1	99	98.137	Loxodonta_africana
ENSCGRG00001003677	Sf1	100	99.531	ENSMFAG00000033122	SF1	100	99.531	Macaca_fascicularis
ENSCGRG00001003677	Sf1	99	99.524	ENSMMUG00000022606	SF1	100	99.524	Macaca_mulatta
ENSCGRG00001003677	Sf1	100	99.531	ENSMNEG00000037901	SF1	100	99.531	Macaca_nemestrina
ENSCGRG00001003677	Sf1	98	99.523	ENSMLEG00000040706	SF1	99	97.218	Mandrillus_leucophaeus
ENSCGRG00001003677	Sf1	66	81.347	ENSMAMG00000001780	sf1	58	78.208	Mastacembelus_armatus
ENSCGRG00001003677	Sf1	65	83.158	ENSMZEG00005009196	sf1	61	77.262	Maylandia_zebra
ENSCGRG00001003677	Sf1	100	99.650	ENSMAUG00000014064	Sf1	100	99.650	Mesocricetus_auratus
ENSCGRG00001003677	Sf1	100	99.374	ENSMICG00000001202	SF1	100	99.374	Microcebus_murinus
ENSCGRG00001003677	Sf1	100	99.650	ENSMOCG00000022038	Sf1	100	99.650	Microtus_ochrogaster
ENSCGRG00001003677	Sf1	65	81.720	ENSMMOG00000020474	sf1	60	77.053	Mola_mola
ENSCGRG00001003677	Sf1	75	97.658	ENSMODG00000029407	SF1	97	94.183	Monodelphis_domestica
ENSCGRG00001003677	Sf1	65	83.422	ENSMALG00000020521	sf1	68	76.596	Monopterus_albus
ENSCGRG00001003677	Sf1	100	99.844	MGP_CAROLIEiJ_G0022607	Sf1	100	100.000	Mus_caroli
ENSCGRG00001003677	Sf1	100	99.844	ENSMUSG00000024949	Sf1	100	100.000	Mus_musculus
ENSCGRG00001003677	Sf1	100	99.844	MGP_PahariEiJ_G0014101	Sf1	100	100.000	Mus_pahari
ENSCGRG00001003677	Sf1	100	99.844	MGP_SPRETEiJ_G0023518	Sf1	100	100.000	Mus_spretus
ENSCGRG00001003677	Sf1	99	99.366	ENSMPUG00000012684	SF1	99	99.366	Mustela_putorius_furo
ENSCGRG00001003677	Sf1	79	93.348	ENSMLUG00000029800	-	78	94.273	Myotis_lucifugus
ENSCGRG00001003677	Sf1	99	99.208	ENSMLUG00000015217	-	99	99.208	Myotis_lucifugus
ENSCGRG00001003677	Sf1	100	97.723	ENSNGAG00000005550	Sf1	100	97.723	Nannospalax_galili
ENSCGRG00001003677	Sf1	65	84.225	ENSNBRG00000017606	sf1	60	79.805	Neolamprologus_brichardi
ENSCGRG00001003677	Sf1	100	99.374	ENSNLEG00000005236	-	100	99.374	Nomascus_leucogenys
ENSCGRG00001003677	Sf1	80	98.051	ENSMEUG00000013424	SF1	97	98.051	Notamacropus_eugenii
ENSCGRG00001003677	Sf1	74	98.526	ENSOPRG00000005008	SF1	96	98.526	Ochotona_princeps
ENSCGRG00001003677	Sf1	100	87.596	ENSODEG00000006102	-	100	88.055	Octodon_degus
ENSCGRG00001003677	Sf1	65	82.895	ENSONIG00000015728	sf1	61	77.030	Oreochromis_niloticus
ENSCGRG00001003677	Sf1	62	87.151	ENSOANG00000002909	SF1	96	87.212	Ornithorhynchus_anatinus
ENSCGRG00001003677	Sf1	99	95.342	ENSOCUG00000026486	SF1	99	95.342	Oryctolagus_cuniculus
ENSCGRG00001003677	Sf1	67	81.074	ENSORLG00000011853	sf1	58	77.724	Oryzias_latipes
ENSCGRG00001003677	Sf1	68	79.750	ENSORLG00020011834	sf1	60	76.291	Oryzias_latipes_hni
ENSCGRG00001003677	Sf1	65	80.890	ENSORLG00015012855	sf1	59	76.978	Oryzias_latipes_hsok
ENSCGRG00001003677	Sf1	67	80.051	ENSOMEG00000005210	sf1	60	77.458	Oryzias_melastigma
ENSCGRG00001003677	Sf1	100	94.793	ENSOGAG00000016196	SF1	100	94.793	Otolemur_garnettii
ENSCGRG00001003677	Sf1	79	98.448	ENSOARG00000009166	SF1	82	99.358	Ovis_aries
ENSCGRG00001003677	Sf1	96	99.511	ENSPPAG00000002799	-	100	99.511	Pan_paniscus
ENSCGRG00001003677	Sf1	96	99.511	ENSPPRG00000013566	SF1	100	99.511	Panthera_pardus
ENSCGRG00001003677	Sf1	99	89.735	ENSPTIG00000016141	SF1	92	97.333	Panthera_tigris_altaica
ENSCGRG00001003677	Sf1	100	94.640	ENSPTRG00000003846	SF1	99	99.296	Pan_troglodytes
ENSCGRG00001003677	Sf1	100	96.201	ENSPANG00000020754	SF1	100	96.201	Papio_anubis
ENSCGRG00001003677	Sf1	58	78.529	ENSPKIG00000012116	sf1	88	74.499	Paramormyrops_kingsleyae
ENSCGRG00001003677	Sf1	56	87.812	ENSPSIG00000003610	SF1	97	75.490	Pelodiscus_sinensis
ENSCGRG00001003677	Sf1	100	99.299	ENSPEMG00000010463	Sf1	100	99.299	Peromyscus_maniculatus_bairdii
ENSCGRG00001003677	Sf1	59	72.321	ENSPMAG00000008272	sf1	53	67.027	Petromyzon_marinus
ENSCGRG00001003677	Sf1	100	98.748	ENSPCIG00000018173	SF1	100	98.748	Phascolarctos_cinereus
ENSCGRG00001003677	Sf1	66	86.280	ENSPFOG00000013683	sf1	68	81.384	Poecilia_formosa
ENSCGRG00001003677	Sf1	65	84.392	ENSPLAG00000018076	sf1	61	79.426	Poecilia_latipinna
ENSCGRG00001003677	Sf1	65	84.392	ENSPMEG00000005726	sf1	62	79.665	Poecilia_mexicana
ENSCGRG00001003677	Sf1	65	83.465	ENSPREG00000004155	sf1	59	78.947	Poecilia_reticulata
ENSCGRG00001003677	Sf1	100	94.487	ENSPPYG00000003098	-	99	99.242	Pongo_abelii
ENSCGRG00001003677	Sf1	82	97.338	ENSPCAG00000013631	SF1	78	97.338	Procavia_capensis
ENSCGRG00001003677	Sf1	100	99.374	ENSPCOG00000027546	SF1	100	99.374	Propithecus_coquereli
ENSCGRG00001003677	Sf1	82	97.338	ENSPVAG00000016938	SF1	79	97.338	Pteropus_vampyrus
ENSCGRG00001003677	Sf1	65	83.158	ENSPNYG00000004673	sf1	59	78.436	Pundamilia_nyererei
ENSCGRG00001003677	Sf1	65	85.450	ENSPNAG00000013072	sf1	59	78.846	Pygocentrus_nattereri
ENSCGRG00001003677	Sf1	100	99.844	ENSRNOG00000021085	Sf1	100	99.844	Rattus_norvegicus
ENSCGRG00001003677	Sf1	100	95.462	ENSRBIG00000042818	SF1	100	95.462	Rhinopithecus_bieti
ENSCGRG00001003677	Sf1	100	95.797	ENSRROG00000045655	SF1	98	97.843	Rhinopithecus_roxellana
ENSCGRG00001003677	Sf1	51	43.421	YLR116W	MSL5	61	43.182	Saccharomyces_cerevisiae
ENSCGRG00001003677	Sf1	97	79.936	ENSSBOG00000022267	-	99	81.010	Saimiri_boliviensis_boliviensis
ENSCGRG00001003677	Sf1	71	91.707	ENSSHAG00000006841	SF1	75	92.927	Sarcophilus_harrisii
ENSCGRG00001003677	Sf1	69	80.702	ENSSFOG00015021978	sf1	55	77.482	Scleropages_formosus
ENSCGRG00001003677	Sf1	72	76.815	ENSSMAG00000007549	sf1	63	76.761	Scophthalmus_maximus
ENSCGRG00001003677	Sf1	66	80.720	ENSSDUG00000003903	sf1	63	76.636	Seriola_dumerili
ENSCGRG00001003677	Sf1	66	80.720	ENSSLDG00000013075	sf1	61	76.636	Seriola_lalandi_dorsalis
ENSCGRG00001003677	Sf1	81	95.164	ENSSARG00000008180	SF1	100	95.164	Sorex_araneus
ENSCGRG00001003677	Sf1	79	82.567	ENSSPUG00000012907	SF1	86	81.034	Sphenodon_punctatus
ENSCGRG00001003677	Sf1	66	80.412	ENSSPAG00000019060	sf1	61	74.828	Stegastes_partitus
ENSCGRG00001003677	Sf1	100	99.374	ENSSSCG00000013021	SF1	100	99.427	Sus_scrofa
ENSCGRG00001003677	Sf1	84	62.799	ENSTNIG00000004820	sf1	80	70.258	Tetraodon_nigroviridis
ENSCGRG00001003677	Sf1	96	84.641	ENSTBEG00000013133	SF1	79	100.000	Tupaia_belangeri
ENSCGRG00001003677	Sf1	81	95.174	ENSTTRG00000008857	SF1	96	95.543	Tursiops_truncatus
ENSCGRG00001003677	Sf1	82	96.947	ENSUAMG00000011977	SF1	100	96.947	Ursus_americanus
ENSCGRG00001003677	Sf1	99	88.421	ENSUMAG00000007268	SF1	94	98.409	Ursus_maritimus
ENSCGRG00001003677	Sf1	60	99.598	ENSVPAG00000011912	SF1	66	99.598	Vicugna_pacos
ENSCGRG00001003677	Sf1	83	99.055	ENSVVUG00000028585	SF1	97	99.055	Vulpes_vulpes
ENSCGRG00001003677	Sf1	97	69.388	ENSXETG00000008434	sf1	68	81.311	Xenopus_tropicalis
ENSCGRG00001003677	Sf1	64	85.753	ENSXCOG00000003704	sf1	75	81.188	Xiphophorus_couchianus
ENSCGRG00001003677	Sf1	65	83.905	ENSXMAG00000007822	sf1	61	79.665	Xiphophorus_maculatus