EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001003813 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 416 bases
Position: chrscaffold_8:36891661-36892076
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001003197	MRP-S32	PF10210.9	9.4e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001004544	-	348	-	ENSCGRP00001003197	115 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001003813's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001003813's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001003813	-	100	75.177	ENSCGRG00001012694	-	98	75.177

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001003813	-	99	68.613	ENSG00000198015	MRPL42	99	68.613	Homo_sapiens
ENSCGRG00001003813	-	66	79.762	ENSAMEG00000009832	MRPL42	66	79.762	Ailuropoda_melanoleuca
ENSCGRG00001003813	-	68	53.608	ENSACIG00000017826	mrpl42	70	53.608	Amphilophus_citrinellus
ENSCGRG00001003813	-	100	46.479	ENSAPLG00000015057	MRPL42	99	46.479	Anas_platyrhynchos
ENSCGRG00001003813	-	99	66.116	ENSANAG00000036083	-	98	66.116	Aotus_nancymaae
ENSCGRG00001003813	-	90	67.797	ENSANAG00000000692	-	84	67.797	Aotus_nancymaae
ENSCGRG00001003813	-	99	64.964	ENSANAG00000036935	-	99	64.964	Aotus_nancymaae
ENSCGRG00001003813	-	91	64.167	ENSANAG00000033101	-	79	64.167	Aotus_nancymaae
ENSCGRG00001003813	-	98	64.029	ENSBTAG00000002708	MRPL42	98	64.029	Bos_taurus
ENSCGRG00001003813	-	78	59.633	ENSBTAG00000052971	-	100	59.633	Bos_taurus
ENSCGRG00001003813	-	99	65.714	ENSCJAG00000046971	MRPL42	99	65.714	Callithrix_jacchus
ENSCGRG00001003813	-	55	66.234	ENSCAFG00000030257	-	86	66.234	Canis_familiaris
ENSCGRG00001003813	-	70	67.327	ENSCAFG00020022967	-	89	67.327	Canis_lupus_dingo
ENSCGRG00001003813	-	55	74.286	ENSCAFG00020016271	-	93	74.286	Canis_lupus_dingo
ENSCGRG00001003813	-	88	71.552	ENSCHIG00000014921	MRPL42	91	71.552	Capra_hircus
ENSCGRG00001003813	-	89	69.231	ENSTSYG00000036466	-	80	69.231	Carlito_syrichta
ENSCGRG00001003813	-	65	71.277	ENSTSYG00000032810	-	86	71.277	Carlito_syrichta
ENSCGRG00001003813	-	99	65.248	ENSTSYG00000006370	-	99	65.248	Carlito_syrichta
ENSCGRG00001003813	-	81	67.797	ENSCAPG00000016985	-	89	67.797	Cavia_aperea
ENSCGRG00001003813	-	98	52.174	ENSCAPG00000015105	-	98	52.174	Cavia_aperea
ENSCGRG00001003813	-	98	52.174	ENSCPOG00000008943	-	98	52.174	Cavia_porcellus
ENSCGRG00001003813	-	96	65.441	ENSCPOG00000030015	-	97	65.714	Cavia_porcellus
ENSCGRG00001003813	-	99	65.000	ENSCCAG00000031179	-	99	65.000	Cebus_capucinus
ENSCGRG00001003813	-	90	67.797	ENSCCAG00000032203	-	72	67.797	Cebus_capucinus
ENSCGRG00001003813	-	90	54.622	ENSCCAG00000029290	-	76	54.622	Cebus_capucinus
ENSCGRG00001003813	-	99	65.714	ENSCATG00000037616	MRPL42	99	65.714	Cercocebus_atys
ENSCGRG00001003813	-	99	66.429	ENSCLAG00000005421	MRPL42	99	66.429	Chinchilla_lanigera
ENSCGRG00001003813	-	99	65.000	ENSCSAG00000003706	MRPL42	99	65.000	Chlorocebus_sabaeus
ENSCGRG00001003813	-	100	51.020	ENSCPBG00000001581	MRPL42	100	51.020	Chrysemys_picta_bellii
ENSCGRG00001003813	-	99	67.143	ENSCANG00000033457	MRPL42	99	67.143	Colobus_angolensis_palliatus
ENSCGRG00001003813	-	100	75.177	ENSCGRG00000003801	Mrpl42	100	75.177	Cricetulus_griseus_crigri
ENSCGRG00001003813	-	99	60.714	ENSDNOG00000032710	-	99	60.714	Dasypus_novemcinctus
ENSCGRG00001003813	-	90	68.644	ENSDNOG00000049701	-	84	68.644	Dasypus_novemcinctus
ENSCGRG00001003813	-	100	67.376	ENSDORG00000015571	Mrpl42	100	67.376	Dipodomys_ordii
ENSCGRG00001003813	-	98	66.906	ENSEASG00005019361	MRPL42	98	66.906	Equus_asinus_asinus
ENSCGRG00001003813	-	98	66.187	ENSECAG00000026888	MRPL42	98	66.187	Equus_caballus
ENSCGRG00001003813	-	85	62.097	ENSFCAG00000040567	-	100	62.097	Felis_catus
ENSCGRG00001003813	-	88	64.220	ENSFCAG00000036356	-	72	64.220	Felis_catus
ENSCGRG00001003813	-	100	65.957	ENSFCAG00000037907	-	99	65.957	Felis_catus
ENSCGRG00001003813	-	94	49.655	ENSFALG00000010717	MRPL42	99	49.655	Ficedula_albicollis
ENSCGRG00001003813	-	100	66.901	ENSFDAG00000018129	MRPL42	100	66.901	Fukomys_damarensis
ENSCGRG00001003813	-	94	46.897	ENSGALG00000011293	MRPL42	99	46.897	Gallus_gallus
ENSCGRG00001003813	-	100	51.020	ENSGAGG00000010125	MRPL42	100	51.020	Gopherus_agassizii
ENSCGRG00001003813	-	99	67.143	ENSGGOG00000022760	MRPL42	99	67.143	Gorilla_gorilla
ENSCGRG00001003813	-	89	71.795	ENSHGLG00000008248	-	95	71.795	Heterocephalus_glaber_female
ENSCGRG00001003813	-	87	73.043	ENSHGLG00000007399	-	87	72.881	Heterocephalus_glaber_female
ENSCGRG00001003813	-	91	70.000	ENSHGLG00100013257	-	98	70.000	Heterocephalus_glaber_male
ENSCGRG00001003813	-	90	72.881	ENSHGLG00100018317	-	83	72.881	Heterocephalus_glaber_male
ENSCGRG00001003813	-	99	63.571	ENSSTOG00000026544	MRPL42	99	63.571	Ictidomys_tridecemlineatus
ENSCGRG00001003813	-	84	52.542	ENSLACG00000006919	MRPL42	84	52.542	Latimeria_chalumnae
ENSCGRG00001003813	-	76	69.159	ENSLAFG00000013779	MRPL42	76	69.159	Loxodonta_africana
ENSCGRG00001003813	-	99	65.714	ENSMFAG00000032330	MRPL42	99	65.714	Macaca_fascicularis
ENSCGRG00001003813	-	99	66.667	ENSMMUG00000016805	MRPL42	99	66.667	Macaca_mulatta
ENSCGRG00001003813	-	99	65.714	ENSMNEG00000028853	MRPL42	99	65.714	Macaca_nemestrina
ENSCGRG00001003813	-	99	66.429	ENSMLEG00000038104	MRPL42	99	66.429	Mandrillus_leucophaeus
ENSCGRG00001003813	-	94	46.207	ENSMGAG00000011346	MRPL42	99	46.207	Meleagris_gallopavo
ENSCGRG00001003813	-	100	68.794	ENSMAUG00000010057	-	100	68.794	Mesocricetus_auratus
ENSCGRG00001003813	-	100	63.433	ENSMAUG00000018130	-	100	63.433	Mesocricetus_auratus
ENSCGRG00001003813	-	69	64.286	ENSMICG00000045594	-	99	64.286	Microcebus_murinus
ENSCGRG00001003813	-	90	72.500	ENSMICG00000036541	-	99	66.038	Microcebus_murinus
ENSCGRG00001003813	-	61	79.221	ENSMICG00000028094	-	81	79.221	Microcebus_murinus
ENSCGRG00001003813	-	100	68.310	ENSMICG00000032596	-	100	68.310	Microcebus_murinus
ENSCGRG00001003813	-	91	73.333	ENSMICG00000035189	-	83	73.333	Microcebus_murinus
ENSCGRG00001003813	-	100	70.213	ENSMOCG00000013541	-	100	70.213	Microtus_ochrogaster
ENSCGRG00001003813	-	100	71.111	ENSMOCG00000004616	-	100	71.111	Microtus_ochrogaster
ENSCGRG00001003813	-	100	69.718	MGP_CAROLIEiJ_G0015750	Mrpl42	100	69.718	Mus_caroli
ENSCGRG00001003813	-	100	69.014	ENSMUSG00000062981	Mrpl42	94	77.778	Mus_musculus
ENSCGRG00001003813	-	99	61.429	ENSMLUG00000023702	-	99	61.429	Myotis_lucifugus
ENSCGRG00001003813	-	97	63.504	ENSMLUG00000025058	-	96	63.504	Myotis_lucifugus
ENSCGRG00001003813	-	98	63.309	ENSMLUG00000029623	-	98	63.309	Myotis_lucifugus
ENSCGRG00001003813	-	90	72.269	ENSNGAG00000000717	Mrpl42	93	72.269	Nannospalax_galili
ENSCGRG00001003813	-	99	67.143	ENSNLEG00000005699	MRPL42	99	67.143	Nomascus_leucogenys
ENSCGRG00001003813	-	99	59.712	ENSOPRG00000010967	MRPL42	99	59.712	Ochotona_princeps
ENSCGRG00001003813	-	99	58.865	ENSODEG00000016452	-	98	59.574	Octodon_degus
ENSCGRG00001003813	-	80	66.387	ENSODEG00000008681	-	100	66.387	Octodon_degus
ENSCGRG00001003813	-	99	62.411	ENSODEG00000012689	-	99	63.121	Octodon_degus
ENSCGRG00001003813	-	90	70.833	ENSOCUG00000010928	MRPL42	85	70.833	Oryctolagus_cuniculus
ENSCGRG00001003813	-	99	60.714	ENSOGAG00000026395	-	99	60.714	Otolemur_garnettii
ENSCGRG00001003813	-	99	67.143	ENSOGAG00000025686	-	99	67.143	Otolemur_garnettii
ENSCGRG00001003813	-	99	64.286	ENSOGAG00000024156	-	99	64.286	Otolemur_garnettii
ENSCGRG00001003813	-	99	63.121	ENSOGAG00000027617	-	99	63.121	Otolemur_garnettii
ENSCGRG00001003813	-	95	65.926	ENSOGAG00000030438	-	96	65.926	Otolemur_garnettii
ENSCGRG00001003813	-	99	67.857	ENSOGAG00000025600	-	99	67.857	Otolemur_garnettii
ENSCGRG00001003813	-	99	65.714	ENSOGAG00000034004	-	99	65.714	Otolemur_garnettii
ENSCGRG00001003813	-	89	71.795	ENSOARG00000015849	MRPL42	91	71.795	Ovis_aries
ENSCGRG00001003813	-	99	67.857	ENSPPAG00000038254	MRPL42	99	67.857	Pan_paniscus
ENSCGRG00001003813	-	85	62.903	ENSPPRG00000017935	-	100	62.903	Panthera_pardus
ENSCGRG00001003813	-	100	66.667	ENSPPRG00000015755	-	99	66.667	Panthera_pardus
ENSCGRG00001003813	-	90	54.622	ENSPPRG00000006533	-	74	54.622	Panthera_pardus
ENSCGRG00001003813	-	100	65.957	ENSPPRG00000013218	-	99	65.957	Panthera_pardus
ENSCGRG00001003813	-	100	65.957	ENSPTIG00000009394	-	99	65.957	Panthera_tigris_altaica
ENSCGRG00001003813	-	74	65.385	ENSPTIG00000009717	-	84	65.385	Panthera_tigris_altaica
ENSCGRG00001003813	-	100	65.957	ENSPTIG00000019099	-	99	65.957	Panthera_tigris_altaica
ENSCGRG00001003813	-	99	67.857	ENSPTRG00000022791	MRPL42	99	67.857	Pan_troglodytes
ENSCGRG00001003813	-	99	60.000	ENSPANG00000030179	MRPL42	99	60.000	Papio_anubis
ENSCGRG00001003813	-	100	48.299	ENSPSIG00000010745	MRPL42	100	48.299	Pelodiscus_sinensis
ENSCGRG00001003813	-	100	70.922	ENSPEMG00000020562	-	94	78.151	Peromyscus_maniculatus_bairdii
ENSCGRG00001003813	-	100	51.020	ENSPCIG00000001472	-	77	51.020	Phascolarctos_cinereus
ENSCGRG00001003813	-	99	65.714	ENSPPYG00000004833	MRPL42	99	65.714	Pongo_abelii
ENSCGRG00001003813	-	76	67.925	ENSPCAG00000003791	MRPL42	90	67.925	Procavia_capensis
ENSCGRG00001003813	-	90	71.186	ENSPCOG00000014986	-	85	71.186	Propithecus_coquereli
ENSCGRG00001003813	-	99	56.061	ENSPCOG00000018896	-	98	56.061	Propithecus_coquereli
ENSCGRG00001003813	-	99	63.636	ENSPCOG00000025008	-	99	63.636	Propithecus_coquereli
ENSCGRG00001003813	-	58	57.333	ENSPVAG00000013736	-	64	57.333	Pteropus_vampyrus
ENSCGRG00001003813	-	100	62.676	ENSRNOG00000021867	AABR07009508.1	99	62.676	Rattus_norvegicus
ENSCGRG00001003813	-	100	67.376	ENSRNOG00000042740	Mrpl42	100	67.376	Rattus_norvegicus
ENSCGRG00001003813	-	90	47.458	ENSRBIG00000044361	-	71	47.458	Rhinopithecus_bieti
ENSCGRG00001003813	-	99	67.857	ENSRBIG00000011046	-	99	67.857	Rhinopithecus_bieti
ENSCGRG00001003813	-	99	65.714	ENSRROG00000033949	MRPL42	99	65.714	Rhinopithecus_roxellana
ENSCGRG00001003813	-	65	67.021	ENSSBOG00000027483	-	82	67.021	Saimiri_boliviensis_boliviensis
ENSCGRG00001003813	-	99	62.857	ENSSBOG00000009656	-	99	62.857	Saimiri_boliviensis_boliviensis
ENSCGRG00001003813	-	75	53.774	ENSSFOG00015006975	mrpl42	73	53.774	Scleropages_formosus
ENSCGRG00001003813	-	84	49.593	ENSSPUG00000015009	-	83	49.593	Sphenodon_punctatus
ENSCGRG00001003813	-	59	46.914	ENSSPUG00000001998	-	100	46.914	Sphenodon_punctatus
ENSCGRG00001003813	-	81	55.340	ENSSPAG00000013637	mrpl42	77	55.340	Stegastes_partitus
ENSCGRG00001003813	-	98	64.748	ENSSSCG00000030478	-	98	64.748	Sus_scrofa
ENSCGRG00001003813	-	58	58.140	ENSSSCG00000035613	-	88	52.525	Sus_scrofa
ENSCGRG00001003813	-	70	62.195	ENSSSCG00000034693	-	84	62.195	Sus_scrofa
ENSCGRG00001003813	-	97	58.537	ENSSSCG00000036897	-	97	58.537	Sus_scrofa
ENSCGRG00001003813	-	76	57.547	ENSTGUG00000008272	MRPL42	90	57.547	Taeniopygia_guttata
ENSCGRG00001003813	-	90	43.750	ENSTNIG00000018478	mrpl42	85	43.750	Tetraodon_nigroviridis
ENSCGRG00001003813	-	77	68.519	ENSTTRG00000003312	MRPL42	81	68.519	Tursiops_truncatus
ENSCGRG00001003813	-	63	68.750	ENSUAMG00000019831	-	84	68.750	Ursus_americanus
ENSCGRG00001003813	-	98	67.626	ENSUAMG00000025405	-	98	67.626	Ursus_americanus
ENSCGRG00001003813	-	80	62.963	ENSUMAG00000014643	-	68	62.963	Ursus_maritimus
ENSCGRG00001003813	-	98	67.626	ENSUMAG00000003107	-	98	67.626	Ursus_maritimus
ENSCGRG00001003813	-	77	67.593	ENSVPAG00000007658	MRPL42	92	67.593	Vicugna_pacos
ENSCGRG00001003813	-	62	70.513	ENSVVUG00000002834	-	96	70.513	Vulpes_vulpes
ENSCGRG00001003813	-	98	65.468	ENSVVUG00000011842	-	98	65.468	Vulpes_vulpes
ENSCGRG00001003813	-	58	75.676	ENSVVUG00000007253	-	95	75.676	Vulpes_vulpes
ENSCGRG00001003813	-	85	48.673	ENSXMAG00000004057	mrpl42	85	48.673	Xiphophorus_maculatus