EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001004047 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 2109 bases
Position: chrscaffold_52:1007090-1009198
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001003362	zf-C2H2	PF00096.26	1.3e-49	1	8
ENSCGRP00001003362	zf-C2H2	PF00096.26	1.3e-49	2	8
ENSCGRP00001003362	zf-C2H2	PF00096.26	1.3e-49	3	8
ENSCGRP00001003362	zf-C2H2	PF00096.26	1.3e-49	4	8
ENSCGRP00001003362	zf-C2H2	PF00096.26	1.3e-49	5	8
ENSCGRP00001003362	zf-C2H2	PF00096.26	1.3e-49	6	8
ENSCGRP00001003362	zf-C2H2	PF00096.26	1.3e-49	7	8
ENSCGRP00001003362	zf-C2H2	PF00096.26	1.3e-49	8	8
ENSCGRP00001003362	zf-met	PF12874.7	4.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001004826	-	1473	-	ENSCGRP00001003362	490 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001004047's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001004047's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001004047	-	74	52.344	ENSCGRG00001019143	-	76	52.344
ENSCGRG00001004047	-	67	46.906	ENSCGRG00001013939	Zfp454	68	46.906
ENSCGRG00001004047	-	81	34.682	ENSCGRG00001010581	Prdm5	81	44.186
ENSCGRG00001004047	-	64	42.609	ENSCGRG00001005125	Wt1	50	43.396
ENSCGRG00001004047	-	63	48.691	ENSCGRG00001019468	Zfp628	60	46.919
ENSCGRG00001004047	-	84	46.205	ENSCGRG00001001639	Zfp882	88	46.205
ENSCGRG00001004047	-	64	42.433	ENSCGRG00001021088	Zfp354a	63	42.433
ENSCGRG00001004047	-	64	44.304	ENSCGRG00001015424	-	57	44.304
ENSCGRG00001004047	-	58	37.778	ENSCGRG00001004071	Patz1	54	31.092
ENSCGRG00001004047	-	66	43.505	ENSCGRG00001012523	-	98	44.551
ENSCGRG00001004047	-	69	41.564	ENSCGRG00001010967	Zfp1	86	45.935
ENSCGRG00001004047	-	66	47.647	ENSCGRG00001002406	Zfp39	64	47.647
ENSCGRG00001004047	-	74	44.795	ENSCGRG00001007115	-	87	44.402
ENSCGRG00001004047	-	63	46.360	ENSCGRG00001020646	Gm3854	55	46.360
ENSCGRG00001004047	-	72	42.012	ENSCGRG00001006591	Zkscan3	50	42.012
ENSCGRG00001004047	-	64	48.014	ENSCGRG00001013561	Zfp768	57	44.737
ENSCGRG00001004047	-	65	54.386	ENSCGRG00001007163	-	92	54.386
ENSCGRG00001004047	-	82	46.129	ENSCGRG00001000576	Zfp26	76	46.207
ENSCGRG00001004047	-	82	47.619	ENSCGRG00001012398	Zfp236	66	38.318
ENSCGRG00001004047	-	80	46.512	ENSCGRG00001023858	Zfp560	70	46.512
ENSCGRG00001004047	-	66	34.278	ENSCGRG00001001429	Zfp574	82	39.785
ENSCGRG00001004047	-	76	45.517	ENSCGRG00001010752	2610008E11Rik	74	44.712
ENSCGRG00001004047	-	64	40.333	ENSCGRG00001002297	-	97	40.333
ENSCGRG00001004047	-	65	33.673	ENSCGRG00001023063	Zfp423	96	34.000
ENSCGRG00001004047	-	64	47.231	ENSCGRG00001017579	Zfp112	67	47.231
ENSCGRG00001004047	-	66	45.223	ENSCGRG00001024630	-	84	45.223
ENSCGRG00001004047	-	67	46.599	ENSCGRG00001012803	-	76	46.599
ENSCGRG00001004047	-	66	46.784	ENSCGRG00001024303	-	98	46.980
ENSCGRG00001004047	-	64	36.424	ENSCGRG00001008879	Maz	60	34.112
ENSCGRG00001004047	-	64	36.909	ENSCGRG00001009557	Zfp319	87	38.000
ENSCGRG00001004047	-	76	37.891	ENSCGRG00001017330	Repin1	83	41.791
ENSCGRG00001004047	-	84	42.173	ENSCGRG00001011966	Zfp715	64	42.857
ENSCGRG00001004047	-	63	36.296	ENSCGRG00001013674	Snai2	52	36.296
ENSCGRG00001004047	-	78	50.000	ENSCGRG00001013598	Zfp865	79	41.700
ENSCGRG00001004047	-	64	34.091	ENSCGRG00001013279	Zfp784	73	47.573
ENSCGRG00001004047	-	67	43.885	ENSCGRG00001013602	-	84	42.628
ENSCGRG00001004047	-	71	45.115	ENSCGRG00001012640	Zfp94	77	45.115
ENSCGRG00001004047	-	64	46.667	ENSCGRG00001013367	Zfp61	52	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001004047	-	90	45.092	ENSACIG00000017647	-	91	45.092	Amphilophus_citrinellus
ENSCGRG00001004047	-	78	45.181	ENSAOCG00000003277	-	93	56.364	Amphiprion_ocellaris
ENSCGRG00001004047	-	68	42.675	ENSAPEG00000016601	-	87	42.405	Amphiprion_percula
ENSCGRG00001004047	-	76	45.570	ENSACLG00000015989	-	87	45.570	Astatotilapia_calliptera
ENSCGRG00001004047	-	67	49.123	ENSACLG00000005615	-	52	49.123	Astatotilapia_calliptera
ENSCGRG00001004047	-	66	45.918	ENSCSAVG00000002179	-	99	42.771	Ciona_savignyi
ENSCGRG00001004047	-	69	48.869	ENSCSEG00000001771	-	60	49.296	Cynoglossus_semilaevis
ENSCGRG00001004047	-	64	42.812	ENSEBUG00000011244	-	67	42.812	Eptatretus_burgeri
ENSCGRG00001004047	-	64	43.894	ENSEBUG00000002537	-	87	43.894	Eptatretus_burgeri
ENSCGRG00001004047	-	64	46.259	ENSEBUG00000002589	-	78	46.259	Eptatretus_burgeri
ENSCGRG00001004047	-	71	45.128	ENSHBUG00000012758	-	88	45.128	Haplochromis_burtoni
ENSCGRG00001004047	-	76	39.228	ENSHBUG00000016546	-	75	39.228	Haplochromis_burtoni
ENSCGRG00001004047	-	67	49.123	ENSHBUG00000020071	-	52	49.123	Haplochromis_burtoni
ENSCGRG00001004047	-	76	39.550	ENSMZEG00005027844	-	75	39.550	Maylandia_zebra
ENSCGRG00001004047	-	77	41.463	ENSMZEG00005020731	-	83	41.463	Maylandia_zebra
ENSCGRG00001004047	-	64	49.237	MGP_SPRETEiJ_G0030709	-	80	45.329	Mus_spretus
ENSCGRG00001004047	-	71	50.292	ENSNBRG00000023229	-	84	50.292	Neolamprologus_brichardi
ENSCGRG00001004047	-	66	39.739	ENSONIG00000014100	-	90	39.739	Oreochromis_niloticus
ENSCGRG00001004047	-	71	41.339	ENSONIG00000018188	-	100	41.339	Oreochromis_niloticus
ENSCGRG00001004047	-	64	37.643	ENSONIG00000006238	-	99	37.175	Oreochromis_niloticus
ENSCGRG00001004047	-	71	41.232	ENSPFOG00000007708	-	99	37.785	Poecilia_formosa
ENSCGRG00001004047	-	64	42.132	ENSPLAG00000010448	-	52	39.535	Poecilia_latipinna
ENSCGRG00001004047	-	74	48.309	ENSPCAG00000001613	-	74	50.526	Procavia_capensis
ENSCGRG00001004047	-	73	46.497	ENSPNYG00000005671	-	86	46.497	Pundamilia_nyererei
ENSCGRG00001004047	-	63	49.321	ENSPNAG00000015131	-	91	46.444	Pygocentrus_nattereri
ENSCGRG00001004047	-	82	48.058	ENSSFOG00015000652	ZNF775	94	48.058	Scleropages_formosus
ENSCGRG00001004047	-	77	43.455	ENSSDUG00000004089	-	98	39.344	Seriola_dumerili
ENSCGRG00001004047	-	65	46.154	ENSSDUG00000020595	-	87	43.077	Seriola_dumerili
ENSCGRG00001004047	-	65	48.936	ENSSDUG00000005401	-	86	49.390	Seriola_dumerili
ENSCGRG00001004047	-	73	50.000	ENSSPUG00000007064	-	97	52.047	Sphenodon_punctatus
ENSCGRG00001004047	-	72	37.190	ENSSPAG00000009587	-	99	37.190	Stegastes_partitus
ENSCGRG00001004047	-	67	50.568	ENSTTRG00000004891	-	70	50.568	Tursiops_truncatus
ENSCGRG00001004047	-	64	50.000	ENSXETG00000030967	-	94	50.000	Xenopus_tropicalis
ENSCGRG00001004047	-	67	33.832	ENSXETG00000015125	-	97	40.240	Xenopus_tropicalis