EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001004071 (Gene tree)
Gene ID: -
Gene Symbol: Patz1
Alias: 8430401L15Rik|MAZR|POZ-AT hook-zinc finger protein|Zfp278
Full Name: POZ (BTB) and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 17483 bases
Position: chrscaffold_13:2238119-2255601
Accession: 1891832
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001003383	zf-C2H2	PF00096.26	5e-25	1	4
ENSCGRP00001003383	zf-C2H2	PF00096.26	5e-25	2	4
ENSCGRP00001003383	zf-C2H2	PF00096.26	5e-25	3	4
ENSCGRP00001003383	zf-C2H2	PF00096.26	5e-25	4	4
ENSCGRP00001003385	zf-C2H2	PF00096.26	3.7e-19	1	3
ENSCGRP00001003385	zf-C2H2	PF00096.26	3.7e-19	2	3
ENSCGRP00001003385	zf-C2H2	PF00096.26	3.7e-19	3	3
ENSCGRP00001003393	zf-C2H2	PF00096.26	3.4e-14	1	2
ENSCGRP00001003393	zf-C2H2	PF00096.26	3.4e-14	2	2
ENSCGRP00001003383	zf-met	PF12874.7	5.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001004877	-	1584	-	ENSCGRP00001003393	527 (aa)	-	-
ENSCGRT00001004866	-	1896	-	ENSCGRP00001003385	631 (aa)	-	-
ENSCGRT00001004873	-	309	-	ENSCGRP00001003390	102 (aa)	-	UPI00001B63B0
ENSCGRT00001004862	-	2034	-	ENSCGRP00001003383	677 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001004071's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001004071's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001004071	Patz1	50	34.337	ENSCGRG00001002406	Zfp39	63	30.795
ENSCGRG00001004071	Patz1	52	33.058	ENSCGRG00001012640	Zfp94	72	33.058
ENSCGRG00001004071	Patz1	59	31.000	ENSCGRG00001013602	-	82	31.000
ENSCGRG00001004071	Patz1	53	30.909	ENSCGRG00001001429	Zfp574	63	30.220
ENSCGRG00001004071	Patz1	54	34.234	ENSCGRG00001017330	Repin1	79	35.514
ENSCGRG00001004071	Patz1	52	36.364	ENSCGRG00001013367	Zfp61	50	36.364
ENSCGRG00001004071	Patz1	55	33.730	ENSCGRG00001024303	-	95	42.222
ENSCGRG00001004071	Patz1	53	33.824	ENSCGRG00001010581	Prdm5	81	38.372
ENSCGRG00001004071	Patz1	54	31.092	ENSCGRG00001004047	-	58	37.778
ENSCGRG00001004071	Patz1	55	36.066	ENSCGRG00001020646	Gm3854	68	39.785
ENSCGRG00001004071	Patz1	61	33.140	ENSCGRG00001000576	Zfp26	87	32.738
ENSCGRG00001004071	Patz1	80	36.559	ENSCGRG00001011456	Zbtb14	90	38.889
ENSCGRG00001004071	Patz1	60	31.095	ENSCGRG00001012523	-	79	30.824
ENSCGRG00001004071	Patz1	54	31.373	ENSCGRG00001007163	-	81	30.159
ENSCGRG00001004071	Patz1	52	41.304	ENSCGRG00001012803	-	67	42.391
ENSCGRG00001004071	Patz1	71	33.333	ENSCGRG00001022459	Zfp651	56	38.235
ENSCGRG00001004071	Patz1	54	32.000	ENSCGRG00001019499	Zbtb24	52	32.000
ENSCGRG00001004071	Patz1	54	30.286	ENSCGRG00001010752	2610008E11Rik	67	35.652
ENSCGRG00001004071	Patz1	60	31.206	ENSCGRG00001023858	Zfp560	60	31.004
ENSCGRG00001004071	Patz1	51	37.037	ENSCGRG00001019468	Zfp628	54	36.257
ENSCGRG00001004071	Patz1	59	31.128	ENSCGRG00001024630	-	74	37.000
ENSCGRG00001004071	Patz1	70	32.576	ENSCGRG00001019408	Zbtb17	57	32.948
ENSCGRG00001004071	Patz1	52	31.298	ENSCGRG00001007115	-	79	35.965
ENSCGRG00001004071	Patz1	67	31.579	ENSCGRG00001001639	Zfp882	84	32.161

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001004071	Patz1	100	97.234	ENSG00000100105	PATZ1	100	97.234	Homo_sapiens
ENSCGRG00001004071	Patz1	99	58.317	ENSAPOG00000018447	patz1	100	57.290	Acanthochromis_polyacanthus
ENSCGRG00001004071	Patz1	100	96.943	ENSAMEG00000007074	PATZ1	100	96.943	Ailuropoda_melanoleuca
ENSCGRG00001004071	Patz1	100	56.919	ENSACIG00000016779	patz1	100	56.633	Amphilophus_citrinellus
ENSCGRG00001004071	Patz1	100	56.303	ENSAPEG00000013354	patz1	100	56.303	Amphiprion_percula
ENSCGRG00001004071	Patz1	99	60.784	ENSATEG00000011260	patz1	100	56.259	Anabas_testudineus
ENSCGRG00001004071	Patz1	85	89.212	ENSAPLG00000003934	PATZ1	99	89.041	Anas_platyrhynchos
ENSCGRG00001004071	Patz1	100	97.234	ENSANAG00000029603	PATZ1	100	97.234	Aotus_nancymaae
ENSCGRG00001004071	Patz1	97	60.202	ENSAMXG00000002273	patz1	98	58.887	Astyanax_mexicanus
ENSCGRG00001004071	Patz1	100	96.943	ENSBTAG00000005478	PATZ1	100	96.943	Bos_taurus
ENSCGRG00001004071	Patz1	100	97.234	ENSCJAG00000010978	PATZ1	100	97.234	Callithrix_jacchus
ENSCGRG00001004071	Patz1	100	97.089	ENSCAFG00000013087	PATZ1	100	97.089	Canis_familiaris
ENSCGRG00001004071	Patz1	100	96.507	ENSCHIG00000020203	PATZ1	100	96.507	Capra_hircus
ENSCGRG00001004071	Patz1	100	96.943	ENSTSYG00000033183	PATZ1	100	96.943	Carlito_syrichta
ENSCGRG00001004071	Patz1	100	97.234	ENSCCAG00000028772	PATZ1	100	97.234	Cebus_capucinus
ENSCGRG00001004071	Patz1	100	97.234	ENSCATG00000006101	PATZ1	100	97.234	Cercocebus_atys
ENSCGRG00001004071	Patz1	100	87.246	ENSCPBG00000011277	PATZ1	100	86.957	Chrysemys_picta_bellii
ENSCGRG00001004071	Patz1	100	97.234	ENSCANG00000024972	PATZ1	100	97.234	Colobus_angolensis_palliatus
ENSCGRG00001004071	Patz1	93	97.823	ENSCGRG00000004814	Patz1	100	97.823	Cricetulus_griseus_crigri
ENSCGRG00001004071	Patz1	100	53.287	ENSCSEG00000001385	patz1	100	53.782	Cynoglossus_semilaevis
ENSCGRG00001004071	Patz1	100	57.080	ENSCVAG00000007684	patz1	100	57.903	Cyprinodon_variegatus
ENSCGRG00001004071	Patz1	97	58.683	ENSDARG00000076584	patz1	98	57.447	Danio_rerio
ENSCGRG00001004071	Patz1	90	96.607	ENSDNOG00000003183	PATZ1	100	96.607	Dasypus_novemcinctus
ENSCGRG00001004071	Patz1	100	97.089	ENSDORG00000023834	Patz1	100	97.089	Dipodomys_ordii
ENSCGRG00001004071	Patz1	100	96.943	ENSECAG00000025030	PATZ1	100	96.943	Equus_caballus
ENSCGRG00001004071	Patz1	99	59.811	ENSELUG00000002333	patz1	100	60.474	Esox_lucius
ENSCGRG00001004071	Patz1	100	97.089	ENSFCAG00000030253	PATZ1	100	97.089	Felis_catus
ENSCGRG00001004071	Patz1	86	89.492	ENSFALG00000007450	PATZ1	99	89.438	Ficedula_albicollis
ENSCGRG00001004071	Patz1	95	94.932	ENSFDAG00000005614	PATZ1	100	94.932	Fukomys_damarensis
ENSCGRG00001004071	Patz1	100	56.452	ENSFHEG00000014755	patz1	100	56.158	Fundulus_heteroclitus
ENSCGRG00001004071	Patz1	98	53.436	ENSGMOG00000001062	patz1	100	52.524	Gadus_morhua
ENSCGRG00001004071	Patz1	100	86.619	ENSGALG00000006934	PATZ1	100	86.763	Gallus_gallus
ENSCGRG00001004071	Patz1	100	57.558	ENSGAFG00000010053	patz1	100	56.241	Gambusia_affinis
ENSCGRG00001004071	Patz1	84	89.880	ENSGAGG00000003214	PATZ1	100	89.708	Gopherus_agassizii
ENSCGRG00001004071	Patz1	100	97.380	ENSGGOG00000017171	PATZ1	100	97.380	Gorilla_gorilla
ENSCGRG00001004071	Patz1	98	60.672	ENSHCOG00000017644	patz1	93	56.213	Hippocampus_comes
ENSCGRG00001004071	Patz1	97	58.266	ENSIPUG00000017653	patz1	97	52.528	Ictalurus_punctatus
ENSCGRG00001004071	Patz1	100	96.943	ENSSTOG00000020707	PATZ1	100	96.943	Ictidomys_tridecemlineatus
ENSCGRG00001004071	Patz1	100	95.356	ENSJJAG00000015259	Patz1	100	95.356	Jaculus_jaculus
ENSCGRG00001004071	Patz1	100	55.920	ENSKMAG00000008157	patz1	100	56.028	Kryptolebias_marmoratus
ENSCGRG00001004071	Patz1	100	96.361	ENSLAFG00000002317	PATZ1	100	96.361	Loxodonta_africana
ENSCGRG00001004071	Patz1	100	97.089	ENSMFAG00000040968	PATZ1	100	97.089	Macaca_fascicularis
ENSCGRG00001004071	Patz1	100	97.089	ENSMNEG00000037588	PATZ1	100	97.089	Macaca_nemestrina
ENSCGRG00001004071	Patz1	100	97.234	ENSMLEG00000030938	PATZ1	100	97.234	Mandrillus_leucophaeus
ENSCGRG00001004071	Patz1	100	56.305	ENSMAMG00000023652	patz1	100	56.598	Mastacembelus_armatus
ENSCGRG00001004071	Patz1	85	85.641	ENSMGAG00000008439	PATZ1	100	85.470	Meleagris_gallopavo
ENSCGRG00001004071	Patz1	100	97.962	ENSMAUG00000004129	Patz1	100	97.962	Mesocricetus_auratus
ENSCGRG00001004071	Patz1	100	96.943	ENSMICG00000005430	PATZ1	100	96.943	Microcebus_murinus
ENSCGRG00001004071	Patz1	100	97.525	ENSMOCG00000014488	Patz1	100	97.525	Microtus_ochrogaster
ENSCGRG00001004071	Patz1	99	52.998	ENSMMOG00000021679	patz1	100	47.887	Mola_mola
ENSCGRG00001004071	Patz1	100	55.446	ENSMALG00000021172	patz1	100	55.446	Monopterus_albus
ENSCGRG00001004071	Patz1	100	97.234	MGP_CAROLIEiJ_G0016007	Patz1	100	97.234	Mus_caroli
ENSCGRG00001004071	Patz1	100	97.380	ENSMUSG00000020453	Patz1	100	97.380	Mus_musculus
ENSCGRG00001004071	Patz1	100	97.380	MGP_PahariEiJ_G0016884	Patz1	100	97.380	Mus_pahari
ENSCGRG00001004071	Patz1	100	97.380	MGP_SPRETEiJ_G0016846	Patz1	100	97.380	Mus_spretus
ENSCGRG00001004071	Patz1	100	96.798	ENSMLUG00000009942	PATZ1	100	96.798	Myotis_lucifugus
ENSCGRG00001004071	Patz1	100	97.671	ENSNGAG00000010268	Patz1	100	97.671	Nannospalax_galili
ENSCGRG00001004071	Patz1	100	57.103	ENSNBRG00000016032	patz1	100	57.103	Neolamprologus_brichardi
ENSCGRG00001004071	Patz1	67	91.183	ENSMEUG00000016293	PATZ1	100	91.183	Notamacropus_eugenii
ENSCGRG00001004071	Patz1	100	96.361	ENSODEG00000003589	PATZ1	100	96.361	Octodon_degus
ENSCGRG00001004071	Patz1	100	56.955	ENSONIG00000004248	patz1	100	57.101	Oreochromis_niloticus
ENSCGRG00001004071	Patz1	100	91.147	ENSOANG00000014654	PATZ1	100	91.872	Ornithorhynchus_anatinus
ENSCGRG00001004071	Patz1	100	57.099	ENSORLG00020010937	patz1	100	57.099	Oryzias_latipes_hni
ENSCGRG00001004071	Patz1	100	56.535	ENSORLG00015007396	patz1	100	56.535	Oryzias_latipes_hsok
ENSCGRG00001004071	Patz1	100	55.982	ENSOMEG00000006636	patz1	100	55.982	Oryzias_melastigma
ENSCGRG00001004071	Patz1	100	96.798	ENSOGAG00000027905	PATZ1	100	96.798	Otolemur_garnettii
ENSCGRG00001004071	Patz1	100	97.380	ENSPPAG00000033227	PATZ1	100	97.380	Pan_paniscus
ENSCGRG00001004071	Patz1	100	97.089	ENSPPRG00000001573	PATZ1	100	97.089	Panthera_pardus
ENSCGRG00001004071	Patz1	86	96.627	ENSPTIG00000007937	PATZ1	91	96.627	Panthera_tigris_altaica
ENSCGRG00001004071	Patz1	100	97.380	ENSPTRG00000014268	PATZ1	100	97.380	Pan_troglodytes
ENSCGRG00001004071	Patz1	100	97.234	ENSPANG00000006821	PATZ1	100	97.234	Papio_anubis
ENSCGRG00001004071	Patz1	100	60.674	ENSPKIG00000019584	patz1	100	60.393	Paramormyrops_kingsleyae
ENSCGRG00001004071	Patz1	57	92.677	ENSPSIG00000011562	-	100	92.857	Pelodiscus_sinensis
ENSCGRG00001004071	Patz1	59	80.630	ENSPSIG00000016553	-	91	80.387	Pelodiscus_sinensis
ENSCGRG00001004071	Patz1	100	55.478	ENSPMGG00000010196	patz1	100	55.758	Periophthalmus_magnuspinnatus
ENSCGRG00001004071	Patz1	100	97.525	ENSPEMG00000005321	Patz1	100	97.525	Peromyscus_maniculatus_bairdii
ENSCGRG00001004071	Patz1	100	56.369	ENSPLAG00000010425	patz1	100	56.012	Poecilia_latipinna
ENSCGRG00001004071	Patz1	100	56.598	ENSPMEG00000000255	patz1	100	56.241	Poecilia_mexicana
ENSCGRG00001004071	Patz1	100	56.138	ENSPREG00000002440	patz1	100	55.801	Poecilia_reticulata
ENSCGRG00001004071	Patz1	100	97.089	ENSPPYG00000011732	PATZ1	100	97.089	Pongo_abelii
ENSCGRG00001004071	Patz1	100	96.798	ENSPCOG00000019729	PATZ1	100	96.798	Propithecus_coquereli
ENSCGRG00001004071	Patz1	100	96.943	ENSPVAG00000001749	PATZ1	100	96.943	Pteropus_vampyrus
ENSCGRG00001004071	Patz1	100	57.622	ENSPNYG00000013542	patz1	100	57.622	Pundamilia_nyererei
ENSCGRG00001004071	Patz1	84	58.279	ENSPNAG00000017222	patz1	99	57.327	Pygocentrus_nattereri
ENSCGRG00001004071	Patz1	100	97.234	ENSRBIG00000044231	PATZ1	100	97.234	Rhinopithecus_bieti
ENSCGRG00001004071	Patz1	100	97.234	ENSRROG00000037155	PATZ1	100	97.234	Rhinopithecus_roxellana
ENSCGRG00001004071	Patz1	100	97.234	ENSSBOG00000003894	PATZ1	100	97.234	Saimiri_boliviensis_boliviensis
ENSCGRG00001004071	Patz1	71	82.051	ENSSFOG00015013244	patz1	78	82.051	Scleropages_formosus
ENSCGRG00001004071	Patz1	100	85.206	ENSSPUG00000015298	PATZ1	100	84.922	Sphenodon_punctatus
ENSCGRG00001004071	Patz1	84	96.220	ENSSSCG00000010027	PATZ1	100	96.220	Sus_scrofa
ENSCGRG00001004071	Patz1	100	56.414	ENSTRUG00000015366	patz1	100	56.690	Takifugu_rubripes
ENSCGRG00001004071	Patz1	100	96.943	ENSTTRG00000010279	PATZ1	100	96.943	Tursiops_truncatus
ENSCGRG00001004071	Patz1	100	97.036	ENSUAMG00000015014	PATZ1	100	97.036	Ursus_americanus
ENSCGRG00001004071	Patz1	100	71.449	ENSXETG00000004190	patz1	100	70.725	Xenopus_tropicalis
ENSCGRG00001004071	Patz1	100	57.122	ENSXMAG00000015531	patz1	100	56.535	Xiphophorus_maculatus