EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001004136 (Gene tree)
Gene ID: -
Gene Symbol: Snrpn
Alias: 2410045I01Rik|Peg4|Pwcr1
Full Name: small nuclear ribonucleoprotein-associated protein N
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 5272 bases
Position: chrscaffold_156:82188-87459
Accession: 103159417
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001003428	LSM	PF01423.22	6.9e-20	1	1
ENSCGRP00001003434	LSM	PF01423.22	7.3e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001004951	-	741	XM_007649748	ENSCGRP00001003434	246 (aa)	XP_007647938	-
ENSCGRT00001004942	-	723	-	ENSCGRP00001003428	240 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001004136's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001004136's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001004136	Snrpn	92	92.308	ENSCGRG00001023046	Snrpb	96	92.308

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001004136	Snrpn	100	99.583	ENSG00000128739	SNRPN	100	100.000	Homo_sapiens
ENSCGRG00001004136	Snrpn	99	99.163	ENSAMEG00000007034	SNRPN	99	98.354	Ailuropoda_melanoleuca
ENSCGRG00001004136	Snrpn	100	99.583	ENSANAG00000034241	SNRPN	100	99.583	Aotus_nancymaae
ENSCGRG00001004136	Snrpn	100	98.333	ENSBTAG00000008251	SNRPN	100	98.333	Bos_taurus
ENSCGRG00001004136	Snrpn	100	99.583	ENSCJAG00000003759	-	100	99.583	Callithrix_jacchus
ENSCGRG00001004136	Snrpn	95	99.123	ENSCJAG00000042622	-	95	99.123	Callithrix_jacchus
ENSCGRG00001004136	Snrpn	100	99.167	ENSCAFG00000010127	SNRPN	100	99.167	Canis_familiaris
ENSCGRG00001004136	Snrpn	100	99.167	ENSCAFG00020024075	SNRPN	100	99.167	Canis_lupus_dingo
ENSCGRG00001004136	Snrpn	100	98.333	ENSCHIG00000017477	SNRPN	100	98.333	Capra_hircus
ENSCGRG00001004136	Snrpn	100	99.583	ENSTSYG00000005248	SNRPN	100	99.583	Carlito_syrichta
ENSCGRG00001004136	Snrpn	100	99.583	ENSCAPG00000003047	SNRPN	100	99.583	Cavia_aperea
ENSCGRG00001004136	Snrpn	100	99.583	ENSCPOG00000020270	SNRPN	100	99.583	Cavia_porcellus
ENSCGRG00001004136	Snrpn	100	99.583	ENSCCAG00000024231	SNRPN	100	99.583	Cebus_capucinus
ENSCGRG00001004136	Snrpn	100	99.583	ENSCATG00000032518	SNRPN	100	99.583	Cercocebus_atys
ENSCGRG00001004136	Snrpn	100	99.583	ENSCLAG00000011376	SNRPN	100	99.583	Chinchilla_lanigera
ENSCGRG00001004136	Snrpn	100	99.583	ENSCSAG00000006406	SNRPN	100	99.583	Chlorocebus_sabaeus
ENSCGRG00001004136	Snrpn	98	98.291	ENSCHOG00000001846	SNRPN	88	98.291	Choloepus_hoffmanni
ENSCGRG00001004136	Snrpn	100	99.583	ENSCANG00000041156	SNRPN	100	99.583	Colobus_angolensis_palliatus
ENSCGRG00001004136	Snrpn	100	98.780	ENSCGRG00000001621	Snrpn	100	98.780	Cricetulus_griseus_crigri
ENSCGRG00001004136	Snrpn	72	91.908	ENSCVAG00000014193	SNRPN	69	92.262	Cyprinodon_variegatus
ENSCGRG00001004136	Snrpn	99	98.745	ENSDNOG00000037060	SNRPN	98	98.745	Dasypus_novemcinctus
ENSCGRG00001004136	Snrpn	100	99.167	ENSDORG00000004527	Snrpn	100	99.167	Dipodomys_ordii
ENSCGRG00001004136	Snrpn	100	99.167	ENSEASG00005017871	SNRPN	100	99.167	Equus_asinus_asinus
ENSCGRG00001004136	Snrpn	100	99.167	ENSECAG00000018148	SNRPN	100	99.167	Equus_caballus
ENSCGRG00001004136	Snrpn	99	98.326	ENSEEUG00000007440	-	100	98.326	Erinaceus_europaeus
ENSCGRG00001004136	Snrpn	100	99.167	ENSFCAG00000022298	-	100	99.167	Felis_catus
ENSCGRG00001004136	Snrpn	76	85.246	ENSFDAG00000010528	-	86	85.246	Fukomys_damarensis
ENSCGRG00001004136	Snrpn	100	99.167	ENSFDAG00000016578	-	100	99.167	Fukomys_damarensis
ENSCGRG00001004136	Snrpn	74	76.271	ENSGMOG00000018161	SNRPN	74	75.595	Gadus_morhua
ENSCGRG00001004136	Snrpn	100	99.583	ENSGGOG00000003988	SNRPN	100	99.583	Gorilla_gorilla
ENSCGRG00001004136	Snrpn	90	73.023	ENSGGOG00000024469	-	69	83.212	Gorilla_gorilla
ENSCGRG00001004136	Snrpn	90	80.930	ENSHGLG00000020936	-	88	79.812	Heterocephalus_glaber_female
ENSCGRG00001004136	Snrpn	89	90.141	ENSHGLG00000019812	-	89	90.610	Heterocephalus_glaber_female
ENSCGRG00001004136	Snrpn	100	85.000	ENSHGLG00000002327	-	88	84.507	Heterocephalus_glaber_female
ENSCGRG00001004136	Snrpn	100	99.583	ENSHGLG00000011924	SNRPN	100	99.583	Heterocephalus_glaber_female
ENSCGRG00001004136	Snrpn	100	82.500	ENSHGLG00100004881	-	88	82.629	Heterocephalus_glaber_male
ENSCGRG00001004136	Snrpn	100	99.583	ENSHGLG00100016559	SNRPN	100	99.583	Heterocephalus_glaber_male
ENSCGRG00001004136	Snrpn	89	90.141	ENSHGLG00100021056	-	89	90.610	Heterocephalus_glaber_male
ENSCGRG00001004136	Snrpn	100	99.583	ENSSTOG00000001339	SNRPN	100	99.583	Ictidomys_tridecemlineatus
ENSCGRG00001004136	Snrpn	99	99.163	ENSLAFG00000009458	SNRPN	100	99.167	Loxodonta_africana
ENSCGRG00001004136	Snrpn	100	99.583	ENSMFAG00000042235	SNRPN	100	99.583	Macaca_fascicularis
ENSCGRG00001004136	Snrpn	100	99.583	ENSMMUG00000023139	SNURF	100	99.583	Macaca_mulatta
ENSCGRG00001004136	Snrpn	100	99.583	ENSMNEG00000031291	SNRPN	100	99.583	Macaca_nemestrina
ENSCGRG00001004136	Snrpn	100	99.583	ENSMLEG00000038837	SNRPN	100	99.583	Mandrillus_leucophaeus
ENSCGRG00001004136	Snrpn	92	85.455	ENSMGAG00000008696	SNRPN	92	85.455	Meleagris_gallopavo
ENSCGRG00001004136	Snrpn	100	99.583	ENSMAUG00000000051	Snrpn	100	99.583	Mesocricetus_auratus
ENSCGRG00001004136	Snrpn	100	99.583	ENSMICG00000042356	SNRPN	100	99.583	Microcebus_murinus
ENSCGRG00001004136	Snrpn	100	99.583	ENSMOCG00000015350	Snrpn	100	99.583	Microtus_ochrogaster
ENSCGRG00001004136	Snrpn	92	93.665	ENSMODG00000013926	-	92	93.665	Monodelphis_domestica
ENSCGRG00001004136	Snrpn	100	99.583	MGP_CAROLIEiJ_G0029815	Snrpn	100	99.583	Mus_caroli
ENSCGRG00001004136	Snrpn	100	99.583	ENSMUSG00000102252	Snrpn	100	99.583	Mus_musculus
ENSCGRG00001004136	Snrpn	100	99.583	MGP_PahariEiJ_G0013040	Snrpn	100	99.583	Mus_pahari
ENSCGRG00001004136	Snrpn	100	99.583	MGP_SPRETEiJ_G0030918	Snrpn	100	99.583	Mus_spretus
ENSCGRG00001004136	Snrpn	100	99.167	ENSMPUG00000014638	-	100	99.167	Mustela_putorius_furo
ENSCGRG00001004136	Snrpn	88	51.659	ENSMPUG00000007115	-	64	70.423	Mustela_putorius_furo
ENSCGRG00001004136	Snrpn	99	98.745	ENSMLUG00000023361	-	98	98.750	Myotis_lucifugus
ENSCGRG00001004136	Snrpn	85	60.784	ENSMLUG00000025849	-	72	63.462	Myotis_lucifugus
ENSCGRG00001004136	Snrpn	95	62.281	ENSMLUG00000024428	-	62	71.111	Myotis_lucifugus
ENSCGRG00001004136	Snrpn	100	99.583	ENSNGAG00000000181	Snrpn	100	99.583	Nannospalax_galili
ENSCGRG00001004136	Snrpn	100	83.333	ENSNLEG00000001376	SNRPN	100	82.573	Nomascus_leucogenys
ENSCGRG00001004136	Snrpn	98	81.624	ENSODEG00000016065	-	87	85.990	Octodon_degus
ENSCGRG00001004136	Snrpn	100	95.417	ENSODEG00000019708	-	89	99.052	Octodon_degus
ENSCGRG00001004136	Snrpn	100	99.167	ENSODEG00000013478	-	100	99.167	Octodon_degus
ENSCGRG00001004136	Snrpn	100	98.750	ENSODEG00000020110	-	100	98.750	Octodon_degus
ENSCGRG00001004136	Snrpn	100	99.170	ENSOCUG00000003532	-	100	99.170	Oryctolagus_cuniculus
ENSCGRG00001004136	Snrpn	74	91.525	ENSORLG00020007490	SNRPN	69	92.857	Oryzias_latipes_hni
ENSCGRG00001004136	Snrpn	74	91.525	ENSORLG00015003332	SNRPN	69	92.857	Oryzias_latipes_hsok
ENSCGRG00001004136	Snrpn	74	92.090	ENSOMEG00000002066	SNRPN	69	93.452	Oryzias_melastigma
ENSCGRG00001004136	Snrpn	100	99.583	ENSOGAG00000007392	SNRPN	100	99.583	Otolemur_garnettii
ENSCGRG00001004136	Snrpn	100	98.333	ENSOARG00000009080	SNRPN	100	98.333	Ovis_aries
ENSCGRG00001004136	Snrpn	100	99.583	ENSPPAG00000027650	SNRPN	100	99.583	Pan_paniscus
ENSCGRG00001004136	Snrpn	97	68.803	ENSPPAG00000034049	-	65	79.021	Pan_paniscus
ENSCGRG00001004136	Snrpn	100	99.167	ENSPPRG00000019878	-	100	99.167	Panthera_pardus
ENSCGRG00001004136	Snrpn	85	63.902	ENSPPRG00000006957	-	73	70.199	Panthera_pardus
ENSCGRG00001004136	Snrpn	100	98.750	ENSPTIG00000004537	SNRPN	100	98.750	Panthera_tigris_altaica
ENSCGRG00001004136	Snrpn	97	69.231	ENSPTRG00000052400	-	65	79.720	Pan_troglodytes
ENSCGRG00001004136	Snrpn	100	99.583	ENSPTRG00000006826	SNRPN	100	99.583	Pan_troglodytes
ENSCGRG00001004136	Snrpn	100	99.583	ENSPANG00000020142	SNRPN	100	99.583	Papio_anubis
ENSCGRG00001004136	Snrpn	100	89.583	ENSPEMG00000013920	-	100	89.583	Peromyscus_maniculatus_bairdii
ENSCGRG00001004136	Snrpn	89	95.327	ENSPEMG00000020979	-	89	95.305	Peromyscus_maniculatus_bairdii
ENSCGRG00001004136	Snrpn	100	99.583	ENSPEMG00000012911	-	100	99.583	Peromyscus_maniculatus_bairdii
ENSCGRG00001004136	Snrpn	76	96.703	ENSPCIG00000004699	-	69	93.488	Phascolarctos_cinereus
ENSCGRG00001004136	Snrpn	72	91.908	ENSPMEG00000020674	SNRPN	69	92.857	Poecilia_mexicana
ENSCGRG00001004136	Snrpn	100	99.583	ENSPPYG00000006269	SNURF	100	99.583	Pongo_abelii
ENSCGRG00001004136	Snrpn	100	99.583	ENSPCOG00000014231	SNRPN	100	99.583	Propithecus_coquereli
ENSCGRG00001004136	Snrpn	100	99.583	ENSRNOG00000059764	Snrpn	100	99.583	Rattus_norvegicus
ENSCGRG00001004136	Snrpn	100	99.583	ENSRBIG00000041765	SNRPN	100	99.583	Rhinopithecus_bieti
ENSCGRG00001004136	Snrpn	100	99.583	ENSRROG00000035157	SNRPN	100	99.583	Rhinopithecus_roxellana
ENSCGRG00001004136	Snrpn	100	98.333	ENSSBOG00000024929	-	100	98.333	Saimiri_boliviensis_boliviensis
ENSCGRG00001004136	Snrpn	100	99.583	ENSSBOG00000000110	-	100	99.583	Saimiri_boliviensis_boliviensis
ENSCGRG00001004136	Snrpn	76	96.175	ENSSHAG00000010257	-	87	94.340	Sarcophilus_harrisii
ENSCGRG00001004136	Snrpn	99	77.406	ENSSARG00000000072	SNRPN	100	77.406	Sorex_araneus
ENSCGRG00001004136	Snrpn	100	98.750	ENSSSCG00000028124	SNRPN	100	98.750	Sus_scrofa
ENSCGRG00001004136	Snrpn	100	98.333	ENSTTRG00000010966	SNRPN	89	98.333	Tursiops_truncatus
ENSCGRG00001004136	Snrpn	93	99.103	ENSUAMG00000016284	SNRPN	78	99.103	Ursus_americanus
ENSCGRG00001004136	Snrpn	100	99.167	ENSUMAG00000025589	SNRPN	100	99.167	Ursus_maritimus
ENSCGRG00001004136	Snrpn	95	99.127	ENSVVUG00000017971	SNRPN	94	99.127	Vulpes_vulpes