EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001004257 (Gene tree)
Gene ID: -
Gene Symbol: Synj2
Alias: SJ2
Full Name: synaptojanin 2
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 106499 bases
Position: chrscaffold_0:50779134-50885632
Accession: 1201671
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001003538	Exo_endo_phos	PF03372.23	1.1e-13	1	1
ENSCGRP00001003532	Exo_endo_phos	PF03372.23	1.9e-13	1	1
ENSCGRP00001003531	Exo_endo_phos	PF03372.23	3e-13	1	1
ENSCGRP00001003502	Exo_endo_phos	PF03372.23	3e-13	1	1
ENSCGRP00001003527	Exo_endo_phos	PF03372.23	3.1e-13	1	1
ENSCGRP00001003538	DUF1866	PF08952.11	2e-60	1	1
ENSCGRP00001003532	DUF1866	PF08952.11	3.4e-60	1	1
ENSCGRP00001003531	DUF1866	PF08952.11	4.7e-60	1	1
ENSCGRP00001003502	DUF1866	PF08952.11	4.8e-60	1	1
ENSCGRP00001003527	DUF1866	PF08952.11	4.9e-60	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001005119	-	2439	-	ENSCGRP00001003538	812 (aa)	-	-
ENSCGRT00001005106	-	4299	-	ENSCGRP00001003531	1432 (aa)	-	-
ENSCGRT00001005062	-	4619	-	ENSCGRP00001003502	1446 (aa)	-	-
ENSCGRT00001005108	-	3351	-	ENSCGRP00001003532	1116 (aa)	-	-
ENSCGRT00001005102	-	4712	-	ENSCGRP00001003527	1477 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001004257's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001004257's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001004257	Synj2	88	53.611	ENSCGRG00001010861	Synj1	99	47.404

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001004257	Synj2	99	85.450	ENSG00000078269	SYNJ2	99	88.889	Homo_sapiens
ENSCGRG00001004257	Synj2	97	84.994	ENSAMEG00000009581	SYNJ2	99	80.721	Ailuropoda_melanoleuca
ENSCGRG00001004257	Synj2	97	76.357	ENSAPLG00000002563	SYNJ2	99	69.800	Anas_platyrhynchos
ENSCGRG00001004257	Synj2	97	73.068	ENSACAG00000004945	SYNJ2	98	67.463	Anolis_carolinensis
ENSCGRG00001004257	Synj2	97	91.772	ENSANAG00000026575	SYNJ2	98	89.118	Aotus_nancymaae
ENSCGRG00001004257	Synj2	97	88.466	ENSBTAG00000000817	SYNJ2	99	82.278	Bos_taurus
ENSCGRG00001004257	Synj2	99	85.734	ENSCJAG00000003570	SYNJ2	98	89.277	Callithrix_jacchus
ENSCGRG00001004257	Synj2	97	85.078	ENSCAFG00000000644	SYNJ2	99	83.760	Canis_familiaris
ENSCGRG00001004257	Synj2	97	90.076	ENSCAFG00020015809	SYNJ2	98	87.208	Canis_lupus_dingo
ENSCGRG00001004257	Synj2	97	88.213	ENSCHIG00000011077	SYNJ2	99	81.875	Capra_hircus
ENSCGRG00001004257	Synj2	97	87.050	ENSTSYG00000014342	SYNJ2	94	89.885	Carlito_syrichta
ENSCGRG00001004257	Synj2	97	90.392	ENSCAPG00000000287	SYNJ2	95	90.139	Cavia_aperea
ENSCGRG00001004257	Synj2	97	93.029	ENSCPOG00000009144	SYNJ2	95	94.480	Cavia_porcellus
ENSCGRG00001004257	Synj2	97	91.519	ENSCCAG00000025484	SYNJ2	98	88.959	Cebus_capucinus
ENSCGRG00001004257	Synj2	99	86.273	ENSCATG00000042943	SYNJ2	98	89.841	Cercocebus_atys
ENSCGRG00001004257	Synj2	100	87.323	ENSCLAG00000004730	SYNJ2	100	86.701	Chinchilla_lanigera
ENSCGRG00001004257	Synj2	99	86.136	ENSCSAG00000013130	SYNJ2	99	85.772	Chlorocebus_sabaeus
ENSCGRG00001004257	Synj2	56	97.297	ENSCHOG00000000343	-	52	97.297	Choloepus_hoffmanni
ENSCGRG00001004257	Synj2	97	77.126	ENSCPBG00000016273	SYNJ2	98	72.595	Chrysemys_picta_bellii
ENSCGRG00001004257	Synj2	97	87.410	ENSCANG00000040349	SYNJ2	98	89.853	Colobus_angolensis_palliatus
ENSCGRG00001004257	Synj2	100	100.000	ENSCGRG00000001656	Synj2	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001004257	Synj2	97	80.672	ENSDNOG00000015900	SYNJ2	96	83.525	Dasypus_novemcinctus
ENSCGRG00001004257	Synj2	97	91.487	ENSDORG00000014128	Synj2	98	83.627	Dipodomys_ordii
ENSCGRG00001004257	Synj2	82	91.667	ENSETEG00000017418	SYNJ2	81	91.667	Echinops_telfairi
ENSCGRG00001004257	Synj2	97	90.355	ENSEASG00005018902	SYNJ2	99	84.569	Equus_asinus_asinus
ENSCGRG00001004257	Synj2	100	84.434	ENSECAG00000012646	SYNJ2	93	84.704	Equus_caballus
ENSCGRG00001004257	Synj2	63	78.571	ENSEEUG00000015796	-	57	78.571	Erinaceus_europaeus
ENSCGRG00001004257	Synj2	97	89.467	ENSFCAG00000010854	SYNJ2	98	88.569	Felis_catus
ENSCGRG00001004257	Synj2	97	73.614	ENSFALG00000012593	SYNJ2	94	81.148	Ficedula_albicollis
ENSCGRG00001004257	Synj2	97	92.015	ENSFDAG00000016352	SYNJ2	98	90.806	Fukomys_damarensis
ENSCGRG00001004257	Synj2	97	74.580	ENSGALG00000013727	SYNJ2	91	74.074	Gallus_gallus
ENSCGRG00001004257	Synj2	97	76.407	ENSGAGG00000009857	SYNJ2	98	71.892	Gopherus_agassizii
ENSCGRG00001004257	Synj2	99	85.655	ENSGGOG00000012210	SYNJ2	98	89.524	Gorilla_gorilla
ENSCGRG00001004257	Synj2	99	91.224	ENSHGLG00000007534	SYNJ2	97	90.977	Heterocephalus_glaber_female
ENSCGRG00001004257	Synj2	99	91.224	ENSHGLG00100009973	SYNJ2	96	91.979	Heterocephalus_glaber_male
ENSCGRG00001004257	Synj2	97	88.609	ENSSTOG00000016474	SYNJ2	99	87.148	Ictidomys_tridecemlineatus
ENSCGRG00001004257	Synj2	95	93.152	ENSJJAG00000014436	Synj2	93	94.665	Jaculus_jaculus
ENSCGRG00001004257	Synj2	85	73.888	ENSLACG00000007316	SYNJ2	99	69.426	Latimeria_chalumnae
ENSCGRG00001004257	Synj2	97	89.607	ENSLAFG00000011979	SYNJ2	99	82.496	Loxodonta_africana
ENSCGRG00001004257	Synj2	93	91.389	ENSMFAG00000040552	SYNJ2	99	91.389	Macaca_fascicularis
ENSCGRG00001004257	Synj2	97	87.410	ENSMMUG00000007153	SYNJ2	97	89.804	Macaca_mulatta
ENSCGRG00001004257	Synj2	97	92.395	ENSMNEG00000017211	SYNJ2	98	89.603	Macaca_nemestrina
ENSCGRG00001004257	Synj2	99	83.047	ENSMLEG00000024911	SYNJ2	99	82.685	Mandrillus_leucophaeus
ENSCGRG00001004257	Synj2	97	72.844	ENSMGAG00000012839	SYNJ2	99	72.834	Meleagris_gallopavo
ENSCGRG00001004257	Synj2	100	97.436	ENSMAUG00000022212	Synj2	100	97.436	Mesocricetus_auratus
ENSCGRG00001004257	Synj2	97	89.227	ENSMICG00000015804	SYNJ2	97	88.212	Microcebus_murinus
ENSCGRG00001004257	Synj2	99	96.159	ENSMOCG00000020054	Synj2	99	96.491	Microtus_ochrogaster
ENSCGRG00001004257	Synj2	97	84.311	ENSMODG00000007783	SYNJ2	99	79.253	Monodelphis_domestica
ENSCGRG00001004257	Synj2	99	94.118	MGP_CAROLIEiJ_G0021026	Synj2	100	96.818	Mus_caroli
ENSCGRG00001004257	Synj2	97	95.807	ENSMUSG00000023805	Synj2	100	96.970	Mus_musculus
ENSCGRG00001004257	Synj2	99	94.328	MGP_PahariEiJ_G0023344	Synj2	100	96.970	Mus_pahari
ENSCGRG00001004257	Synj2	99	93.750	MGP_SPRETEiJ_G0021931	Synj2	100	96.364	Mus_spretus
ENSCGRG00001004257	Synj2	97	82.233	ENSMPUG00000005323	SYNJ2	98	85.157	Mustela_putorius_furo
ENSCGRG00001004257	Synj2	97	84.116	ENSMLUG00000000324	SYNJ2	99	81.321	Myotis_lucifugus
ENSCGRG00001004257	Synj2	99	93.193	ENSNGAG00000014859	Synj2	99	92.574	Nannospalax_galili
ENSCGRG00001004257	Synj2	100	80.864	ENSNLEG00000010750	SYNJ2	98	85.975	Nomascus_leucogenys
ENSCGRG00001004257	Synj2	93	87.151	ENSMEUG00000003493	SYNJ2	94	83.498	Notamacropus_eugenii
ENSCGRG00001004257	Synj2	91	86.431	ENSOPRG00000009648	SYNJ2	93	79.649	Ochotona_princeps
ENSCGRG00001004257	Synj2	97	93.029	ENSODEG00000007709	SYNJ2	94	94.268	Octodon_degus
ENSCGRG00001004257	Synj2	53	54.463	ENSOANG00000029828	-	99	60.121	Ornithorhynchus_anatinus
ENSCGRG00001004257	Synj2	98	83.790	ENSOCUG00000004762	SYNJ2	98	83.510	Oryctolagus_cuniculus
ENSCGRG00001004257	Synj2	97	86.220	ENSOGAG00000000488	SYNJ2	100	89.196	Otolemur_garnettii
ENSCGRG00001004257	Synj2	97	83.813	ENSOARG00000004304	SYNJ2	99	81.254	Ovis_aries
ENSCGRG00001004257	Synj2	97	87.336	ENSPPAG00000028831	SYNJ2	99	84.822	Pan_paniscus
ENSCGRG00001004257	Synj2	100	83.390	ENSPPRG00000009068	SYNJ2	98	88.649	Panthera_pardus
ENSCGRG00001004257	Synj2	97	84.274	ENSPTIG00000018780	SYNJ2	94	88.411	Panthera_tigris_altaica
ENSCGRG00001004257	Synj2	97	92.649	ENSPTRG00000018739	SYNJ2	100	90.008	Pan_troglodytes
ENSCGRG00001004257	Synj2	97	92.776	ENSPANG00000010755	SYNJ2	98	89.921	Papio_anubis
ENSCGRG00001004257	Synj2	97	76.527	ENSPSIG00000014659	SYNJ2	98	71.419	Pelodiscus_sinensis
ENSCGRG00001004257	Synj2	97	93.182	ENSPEMG00000006247	Synj2	99	93.560	Peromyscus_maniculatus_bairdii
ENSCGRG00001004257	Synj2	97	87.595	ENSPCIG00000010179	SYNJ2	95	88.247	Phascolarctos_cinereus
ENSCGRG00001004257	Synj2	97	87.530	ENSPPYG00000017130	SYNJ2	99	84.889	Pongo_abelii
ENSCGRG00001004257	Synj2	87	91.935	ENSPCAG00000009217	SYNJ2	84	91.935	Procavia_capensis
ENSCGRG00001004257	Synj2	100	84.997	ENSPCOG00000026910	SYNJ2	97	89.896	Propithecus_coquereli
ENSCGRG00001004257	Synj2	97	83.333	ENSPVAG00000006131	SYNJ2	99	79.568	Pteropus_vampyrus
ENSCGRG00001004257	Synj2	97	94.900	ENSRNOG00000017114	Synj2	98	93.913	Rattus_norvegicus
ENSCGRG00001004257	Synj2	99	85.515	ENSRBIG00000044126	SYNJ2	99	84.193	Rhinopithecus_bieti
ENSCGRG00001004257	Synj2	99	86.205	ENSRROG00000027755	SYNJ2	98	89.603	Rhinopithecus_roxellana
ENSCGRG00001004257	Synj2	99	85.332	ENSSBOG00000034876	SYNJ2	98	89.198	Saimiri_boliviensis_boliviensis
ENSCGRG00001004257	Synj2	95	88.288	ENSSHAG00000018881	SYNJ2	99	78.990	Sarcophilus_harrisii
ENSCGRG00001004257	Synj2	97	76.063	ENSSPUG00000000491	SYNJ2	98	71.051	Sphenodon_punctatus
ENSCGRG00001004257	Synj2	97	85.114	ENSSSCG00000012315	SYNJ2	100	87.285	Sus_scrofa
ENSCGRG00001004257	Synj2	97	72.118	ENSTGUG00000011082	SYNJ2	95	79.671	Taeniopygia_guttata
ENSCGRG00001004257	Synj2	80	89.655	ENSTBEG00000015827	SYNJ2	84	79.880	Tupaia_belangeri
ENSCGRG00001004257	Synj2	100	78.355	ENSTTRG00000009677	SYNJ2	99	78.355	Tursiops_truncatus
ENSCGRG00001004257	Synj2	65	69.201	ENSUAMG00000021958	-	97	74.742	Ursus_americanus
ENSCGRG00001004257	Synj2	97	89.848	ENSUMAG00000012826	SYNJ2	99	84.576	Ursus_maritimus
ENSCGRG00001004257	Synj2	97	81.504	ENSVVUG00000007407	SYNJ2	99	88.875	Vulpes_vulpes
ENSCGRG00001004257	Synj2	98	66.586	ENSXETG00000034066	synj2	89	66.058	Xenopus_tropicalis