EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001004486 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 2895 bases
Position: chrscaffold_28:24286224-24289118
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001003665	HnRNP_M	PF11532.8	0.00027	1	1
ENSCGRP00001003669	RRM_1	PF00076.22	2.6e-33	1	3
ENSCGRP00001003669	RRM_1	PF00076.22	2.6e-33	2	3
ENSCGRP00001003669	RRM_1	PF00076.22	2.6e-33	3	3
ENSCGRP00001003665	RRM_1	PF00076.22	2.6e-33	1	3
ENSCGRP00001003665	RRM_1	PF00076.22	2.6e-33	2	3
ENSCGRP00001003665	RRM_1	PF00076.22	2.6e-33	3	3
ENSCGRP00001003667	RRM_1	PF00076.22	3.3e-33	1	3
ENSCGRP00001003667	RRM_1	PF00076.22	3.3e-33	2	3
ENSCGRP00001003667	RRM_1	PF00076.22	3.3e-33	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001005343	-	1959	-	ENSCGRP00001003667	652 (aa)	-	-
ENSCGRT00001005340	-	1854	-	ENSCGRP00001003665	617 (aa)	-	-
ENSCGRT00001005346	-	1857	-	ENSCGRP00001003669	618 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001004486's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001004486's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001004486	-	80	76.459	ENSCGRG00001012021	-	90	75.446
ENSCGRG00001004486	-	95	77.070	ENSCGRG00001022655	-	93	77.070
ENSCGRG00001004486	-	85	44.589	ENSCGRG00001024080	-	89	43.939
ENSCGRG00001004486	-	99	67.138	ENSCGRG00001008003	-	98	66.044
ENSCGRG00001004486	-	90	69.123	ENSCGRG00001004249	-	92	68.246

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001004486	-	99	76.409	ENSG00000099783	HNRNPM	94	82.258	Homo_sapiens
ENSCGRG00001004486	-	84	68.085	ENSAPOG00000001463	hnrnpm	96	44.275	Acanthochromis_polyacanthus
ENSCGRG00001004486	-	99	76.706	ENSAMEG00000004979	HNRNPM	93	77.827	Ailuropoda_melanoleuca
ENSCGRG00001004486	-	93	51.304	ENSACIG00000011870	hnrnpm	94	45.442	Amphilophus_citrinellus
ENSCGRG00001004486	-	92	55.752	ENSAOCG00000008519	hnrnpm	98	46.043	Amphiprion_ocellaris
ENSCGRG00001004486	-	92	55.752	ENSAPEG00000004257	hnrnpm	97	44.726	Amphiprion_percula
ENSCGRG00001004486	-	94	50.413	ENSATEG00000008976	hnrnpm	97	43.362	Anabas_testudineus
ENSCGRG00001004486	-	94	58.333	ENSAPLG00000010149	HNRNPM	97	58.718	Anas_platyrhynchos
ENSCGRG00001004486	-	99	76.261	ENSANAG00000025358	HNRNPM	97	75.407	Aotus_nancymaae
ENSCGRG00001004486	-	99	64.783	ENSANAG00000019489	-	95	62.025	Aotus_nancymaae
ENSCGRG00001004486	-	93	50.862	ENSACLG00000020495	hnrnpm	97	43.597	Astatotilapia_calliptera
ENSCGRG00001004486	-	93	52.800	ENSAMXG00000016073	hnrnpm	96	43.909	Astyanax_mexicanus
ENSCGRG00001004486	-	52	47.321	ENSBTAG00000048355	-	93	51.055	Bos_taurus
ENSCGRG00001004486	-	99	76.706	ENSBTAG00000021039	HNRNPM	96	76.395	Bos_taurus
ENSCGRG00001004486	-	99	76.409	ENSCJAG00000010802	HNRNPM	96	76.252	Callithrix_jacchus
ENSCGRG00001004486	-	97	75.113	ENSCAFG00000018524	HNRNPM	91	73.855	Canis_familiaris
ENSCGRG00001004486	-	99	74.018	ENSCAFG00020022128	HNRNPM	98	76.271	Canis_lupus_dingo
ENSCGRG00001004486	-	97	75.113	ENSCHIG00000026313	HNRNPM	98	73.855	Capra_hircus
ENSCGRG00001004486	-	97	58.824	ENSTSYG00000030502	-	97	59.970	Carlito_syrichta
ENSCGRG00001004486	-	100	68.127	ENSTSYG00000037074	-	100	66.112	Carlito_syrichta
ENSCGRG00001004486	-	99	76.706	ENSTSYG00000011487	-	96	79.670	Carlito_syrichta
ENSCGRG00001004486	-	80	76.200	ENSCAPG00000011505	HNRNPM	96	76.091	Cavia_aperea
ENSCGRG00001004486	-	99	77.003	ENSCPOG00000015182	HNRNPM	96	76.824	Cavia_porcellus
ENSCGRG00001004486	-	88	69.310	ENSCCAG00000018580	-	98	74.307	Cebus_capucinus
ENSCGRG00001004486	-	99	75.826	ENSCCAG00000018782	HNRNPM	97	75.451	Cebus_capucinus
ENSCGRG00001004486	-	99	76.409	ENSCATG00000035478	HNRNPM	96	76.109	Cercocebus_atys
ENSCGRG00001004486	-	99	77.003	ENSCLAG00000011194	-	96	76.824	Chinchilla_lanigera
ENSCGRG00001004486	-	99	59.816	ENSCLAG00000003049	-	98	59.356	Chinchilla_lanigera
ENSCGRG00001004486	-	94	73.281	ENSCSAG00000008009	HNRNPM	98	69.764	Chlorocebus_sabaeus
ENSCGRG00001004486	-	99	76.113	ENSCHOG00000013627	HNRNPM	95	76.590	Choloepus_hoffmanni
ENSCGRG00001004486	-	89	63.607	ENSCPBG00000017052	-	98	64.098	Chrysemys_picta_bellii
ENSCGRG00001004486	-	99	76.233	ENSCANG00000043491	HNRNPM	96	78.987	Colobus_angolensis_palliatus
ENSCGRG00001004486	-	100	100.000	ENSCGRG00000003596	-	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001004486	-	94	76.842	ENSCGRG00000010065	-	89	76.842	Cricetulus_griseus_crigri
ENSCGRG00001004486	-	99	75.371	ENSCGRG00000012441	-	97	75.431	Cricetulus_griseus_crigri
ENSCGRG00001004486	-	99	67.138	ENSCGRG00000012006	-	98	66.044	Cricetulus_griseus_crigri
ENSCGRG00001004486	-	92	53.097	ENSCSEG00000014980	hnrnpm	93	44.097	Cynoglossus_semilaevis
ENSCGRG00001004486	-	93	52.586	ENSCVAG00000020838	hnrnpm	97	43.502	Cyprinodon_variegatus
ENSCGRG00001004486	-	54	51.695	ENSDARG00000061735	hnrnpm	83	52.326	Danio_rerio
ENSCGRG00001004486	-	97	74.661	ENSDNOG00000012157	HNRNPM	89	73.412	Dasypus_novemcinctus
ENSCGRG00001004486	-	99	76.558	ENSDORG00000008105	Hnrnpm	96	76.252	Dipodomys_ordii
ENSCGRG00001004486	-	94	75.428	ENSETEG00000019712	HNRNPM	96	72.714	Echinops_telfairi
ENSCGRG00001004486	-	97	75.113	ENSEASG00005022434	HNRNPM	89	73.855	Equus_asinus_asinus
ENSCGRG00001004486	-	97	75.113	ENSECAG00000023868	HNRNPM	89	73.855	Equus_caballus
ENSCGRG00001004486	-	60	61.806	ENSEEUG00000001929	-	64	64.662	Erinaceus_europaeus
ENSCGRG00001004486	-	93	52.174	ENSELUG00000021183	hnrnpm	95	44.288	Esox_lucius
ENSCGRG00001004486	-	99	73.294	ENSFCAG00000015218	HNRNPM	96	73.391	Felis_catus
ENSCGRG00001004486	-	94	58.491	ENSFALG00000001059	HNRNPM	98	61.646	Ficedula_albicollis
ENSCGRG00001004486	-	99	76.261	ENSFDAG00000014680	HNRNPM	96	76.109	Fukomys_damarensis
ENSCGRG00001004486	-	93	55.172	ENSFHEG00000006712	hnrnpm	93	45.429	Fundulus_heteroclitus
ENSCGRG00001004486	-	96	42.547	ENSGMOG00000009724	hnrnpm	97	42.012	Gadus_morhua
ENSCGRG00001004486	-	95	58.815	ENSGALG00000000377	HNRNPM	93	58.676	Gallus_gallus
ENSCGRG00001004486	-	93	54.783	ENSGAFG00000013798	hnrnpm	98	42.797	Gambusia_affinis
ENSCGRG00001004486	-	97	45.086	ENSGACG00000010265	hnrnpm	97	47.235	Gasterosteus_aculeatus
ENSCGRG00001004486	-	89	63.443	ENSGAGG00000019124	-	98	63.934	Gopherus_agassizii
ENSCGRG00001004486	-	99	76.409	ENSGGOG00000003498	HNRNPM	96	76.109	Gorilla_gorilla
ENSCGRG00001004486	-	93	50.862	ENSHBUG00000023451	hnrnpm	97	44.126	Haplochromis_burtoni
ENSCGRG00001004486	-	97	71.795	ENSHGLG00000009796	-	93	76.939	Heterocephalus_glaber_female
ENSCGRG00001004486	-	99	77.156	ENSHGLG00100006675	-	96	76.968	Heterocephalus_glaber_male
ENSCGRG00001004486	-	96	44.154	ENSHCOG00000019984	hnrnpm	98	44.527	Hippocampus_comes
ENSCGRG00001004486	-	98	43.472	ENSIPUG00000025097	hnrnpm	98	44.209	Ictalurus_punctatus
ENSCGRG00001004486	-	99	76.706	ENSSTOG00000008112	HNRNPM	96	76.538	Ictidomys_tridecemlineatus
ENSCGRG00001004486	-	99	77.347	ENSJJAG00000017319	Hnrnpm	96	76.571	Jaculus_jaculus
ENSCGRG00001004486	-	93	54.310	ENSKMAG00000022136	hnrnpm	95	43.983	Kryptolebias_marmoratus
ENSCGRG00001004486	-	72	55.172	ENSLBEG00000004545	hnrnpm	97	42.686	Labrus_bergylta
ENSCGRG00001004486	-	98	43.405	ENSLACG00000016814	HNRNPM	81	53.023	Latimeria_chalumnae
ENSCGRG00001004486	-	95	45.133	ENSLOCG00000004456	hnrnpm	96	46.423	Lepisosteus_oculatus
ENSCGRG00001004486	-	96	75.253	ENSLAFG00000013603	HNRNPM	96	74.392	Loxodonta_africana
ENSCGRG00001004486	-	99	76.409	ENSMFAG00000037617	HNRNPM	96	76.109	Macaca_fascicularis
ENSCGRG00001004486	-	99	76.409	ENSMMUG00000018806	HNRNPM	94	82.258	Macaca_mulatta
ENSCGRG00001004486	-	99	76.409	ENSMNEG00000036546	HNRNPM	96	76.109	Macaca_nemestrina
ENSCGRG00001004486	-	99	76.409	ENSMLEG00000042113	HNRNPM	96	76.109	Mandrillus_leucophaeus
ENSCGRG00001004486	-	93	55.000	ENSMAMG00000005612	hnrnpm	83	55.000	Mastacembelus_armatus
ENSCGRG00001004486	-	93	53.448	ENSMZEG00005002512	hnrnpm	92	46.110	Maylandia_zebra
ENSCGRG00001004486	-	94	63.820	ENSMGAG00000000700	HNRNPM	97	63.259	Meleagris_gallopavo
ENSCGRG00001004486	-	99	77.448	ENSMAUG00000017476	Hnrnpm	96	77.253	Mesocricetus_auratus
ENSCGRG00001004486	-	94	74.568	ENSMICG00000028503	-	97	75.730	Microcebus_murinus
ENSCGRG00001004486	-	99	76.706	ENSMICG00000002532	-	96	76.395	Microcebus_murinus
ENSCGRG00001004486	-	99	77.300	ENSMOCG00000005769	Hnrnpm	96	77.396	Microtus_ochrogaster
ENSCGRG00001004486	-	97	41.096	ENSMMOG00000019610	hnrnpm	98	40.590	Mola_mola
ENSCGRG00001004486	-	97	62.197	ENSMODG00000003473	-	98	63.489	Monodelphis_domestica
ENSCGRG00001004486	-	99	69.016	ENSMODG00000003801	-	96	69.547	Monodelphis_domestica
ENSCGRG00001004486	-	93	53.448	ENSMALG00000014280	hnrnpm	98	44.367	Monopterus_albus
ENSCGRG00001004486	-	99	77.003	MGP_CAROLIEiJ_G0021413	Hnrnpm	100	76.984	Mus_caroli
ENSCGRG00001004486	-	99	76.855	ENSMUSG00000059208	Hnrnpm	99	76.190	Mus_musculus
ENSCGRG00001004486	-	99	77.151	MGP_PahariEiJ_G0020418	Hnrnpm	96	76.967	Mus_pahari
ENSCGRG00001004486	-	99	76.855	MGP_SPRETEiJ_G0022325	Hnrnpm	98	81.250	Mus_spretus
ENSCGRG00001004486	-	97	70.240	ENSMPUG00000007241	HNRNPM	90	69.156	Mustela_putorius_furo
ENSCGRG00001004486	-	97	54.516	ENSMLUG00000025231	-	92	53.933	Myotis_lucifugus
ENSCGRG00001004486	-	95	76.816	ENSMLUG00000006696	-	96	74.151	Myotis_lucifugus
ENSCGRG00001004486	-	99	77.151	ENSNGAG00000003707	Hnrnpm	96	76.901	Nannospalax_galili
ENSCGRG00001004486	-	95	57.369	ENSNGAG00000017657	-	96	57.211	Nannospalax_galili
ENSCGRG00001004486	-	93	50.862	ENSNBRG00000015999	hnrnpm	96	45.028	Neolamprologus_brichardi
ENSCGRG00001004486	-	99	67.158	ENSMEUG00000004789	HNRNPM	96	67.756	Notamacropus_eugenii
ENSCGRG00001004486	-	83	91.228	ENSOPRG00000001943	HNRNPM	67	91.228	Ochotona_princeps
ENSCGRG00001004486	-	99	67.020	ENSODEG00000009194	-	98	67.020	Octodon_degus
ENSCGRG00001004486	-	87	73.870	ENSODEG00000011442	-	98	63.663	Octodon_degus
ENSCGRG00001004486	-	90	70.328	ENSODEG00000004347	-	98	70.328	Octodon_degus
ENSCGRG00001004486	-	99	55.099	ENSODEG00000010314	-	97	60.288	Octodon_degus
ENSCGRG00001004486	-	93	53.448	ENSONIG00000001758	hnrnpm	97	45.899	Oreochromis_niloticus
ENSCGRG00001004486	-	66	72.300	ENSOANG00000010259	HNRNPM	95	72.300	Ornithorhynchus_anatinus
ENSCGRG00001004486	-	97	72.897	ENSOCUG00000024611	-	96	71.494	Oryctolagus_cuniculus
ENSCGRG00001004486	-	97	72.549	ENSOCUG00000000552	-	96	73.560	Oryctolagus_cuniculus
ENSCGRG00001004486	-	94	45.455	ENSORLG00000005400	hnrnpm	98	42.462	Oryzias_latipes
ENSCGRG00001004486	-	94	45.455	ENSORLG00020022108	hnrnpm	96	43.123	Oryzias_latipes_hni
ENSCGRG00001004486	-	94	45.385	ENSORLG00015019809	hnrnpm	94	43.266	Oryzias_latipes_hsok
ENSCGRG00001004486	-	93	53.782	ENSOMEG00000013075	hnrnpm	84	53.782	Oryzias_melastigma
ENSCGRG00001004486	-	97	75.794	ENSOGAG00000030987	HNRNPM	96	74.298	Otolemur_garnettii
ENSCGRG00001004486	-	97	75.000	ENSOARG00000003961	HNRNPM	98	72.083	Ovis_aries
ENSCGRG00001004486	-	99	76.409	ENSPPAG00000039365	HNRNPM	96	76.109	Pan_paniscus
ENSCGRG00001004486	-	99	76.706	ENSPPRG00000009284	HNRNPM	96	76.681	Panthera_pardus
ENSCGRG00001004486	-	99	77.099	ENSPTIG00000003024	HNRNPM	92	78.931	Panthera_tigris_altaica
ENSCGRG00001004486	-	99	76.409	ENSPTRG00000010424	HNRNPM	96	76.109	Pan_troglodytes
ENSCGRG00001004486	-	99	76.409	ENSPANG00000000283	HNRNPM	96	76.208	Papio_anubis
ENSCGRG00001004486	-	94	45.679	ENSPKIG00000001332	hnrnpm	94	47.015	Paramormyrops_kingsleyae
ENSCGRG00001004486	-	94	58.605	ENSPSIG00000011477	HNRNPM	97	58.641	Pelodiscus_sinensis
ENSCGRG00001004486	-	93	50.847	ENSPMGG00000012793	hnrnpm	86	50.847	Periophthalmus_magnuspinnatus
ENSCGRG00001004486	-	99	77.300	ENSPEMG00000009260	Hnrnpm	96	77.253	Peromyscus_maniculatus_bairdii
ENSCGRG00001004486	-	99	66.814	ENSPCIG00000020115	HNRNPM	98	71.304	Phascolarctos_cinereus
ENSCGRG00001004486	-	82	62.500	ENSPFOG00000013612	hnrnpm	97	44.349	Poecilia_formosa
ENSCGRG00001004486	-	98	41.760	ENSPLAG00000011139	hnrnpm	98	42.817	Poecilia_latipinna
ENSCGRG00001004486	-	93	50.000	ENSPMEG00000011182	hnrnpm	98	42.817	Poecilia_mexicana
ENSCGRG00001004486	-	98	42.818	ENSPREG00000016114	hnrnpm	98	42.507	Poecilia_reticulata
ENSCGRG00001004486	-	97	75.492	ENSPPYG00000009506	HNRNPM	98	74.003	Pongo_abelii
ENSCGRG00001004486	-	94	77.605	ENSPCAG00000009678	HNRNPM	96	74.678	Procavia_capensis
ENSCGRG00001004486	-	99	76.706	ENSPCOG00000020227	HNRNPM	96	77.745	Propithecus_coquereli
ENSCGRG00001004486	-	98	74.392	ENSPVAG00000009647	HNRNPM	96	75.197	Pteropus_vampyrus
ENSCGRG00001004486	-	93	50.862	ENSPNYG00000006542	hnrnpm	97	42.535	Pundamilia_nyererei
ENSCGRG00001004486	-	95	43.586	ENSPNAG00000020740	hnrnpm	95	44.000	Pygocentrus_nattereri
ENSCGRG00001004486	-	99	77.300	ENSRNOG00000007921	Hnrnpm	96	77.110	Rattus_norvegicus
ENSCGRG00001004486	-	97	69.919	ENSRBIG00000039870	-	99	69.097	Rhinopithecus_bieti
ENSCGRG00001004486	-	90	80.565	ENSRBIG00000041503	HNRNPM	96	79.368	Rhinopithecus_bieti
ENSCGRG00001004486	-	99	76.409	ENSRROG00000038240	-	96	76.109	Rhinopithecus_roxellana
ENSCGRG00001004486	-	97	72.315	ENSRROG00000033189	-	94	75.758	Rhinopithecus_roxellana
ENSCGRG00001004486	-	79	66.290	ENSSBOG00000022413	-	96	68.738	Saimiri_boliviensis_boliviensis
ENSCGRG00001004486	-	99	76.409	ENSSBOG00000032416	HNRNPM	96	76.252	Saimiri_boliviensis_boliviensis
ENSCGRG00001004486	-	89	66.835	ENSSHAG00000005864	HNRNPM	97	72.432	Sarcophilus_harrisii
ENSCGRG00001004486	-	94	45.814	ENSSFOG00015008815	hnrnpm	94	47.727	Scleropages_formosus
ENSCGRG00001004486	-	92	56.637	ENSSMAG00000003992	hnrnpm	97	44.351	Scophthalmus_maximus
ENSCGRG00001004486	-	97	42.857	ENSSDUG00000002188	hnrnpm	96	43.254	Seriola_dumerili
ENSCGRG00001004486	-	93	52.586	ENSSLDG00000016713	hnrnpm	98	40.853	Seriola_lalandi_dorsalis
ENSCGRG00001004486	-	70	94.737	ENSSARG00000000267	HNRNPM	70	94.737	Sorex_araneus
ENSCGRG00001004486	-	94	57.771	ENSSPUG00000002270	HNRNPM	96	57.562	Sphenodon_punctatus
ENSCGRG00001004486	-	94	52.066	ENSSPAG00000023132	hnrnpm	96	44.444	Stegastes_partitus
ENSCGRG00001004486	-	99	74.481	ENSSSCG00000013602	HNRNPM	98	80.610	Sus_scrofa
ENSCGRG00001004486	-	85	61.821	ENSTGUG00000000938	HNRNPM	100	61.821	Taeniopygia_guttata
ENSCGRG00001004486	-	97	42.550	ENSTRUG00000013783	hnrnpm	97	45.171	Takifugu_rubripes
ENSCGRG00001004486	-	97	42.482	ENSTNIG00000015530	hnrnpm	97	45.433	Tetraodon_nigroviridis
ENSCGRG00001004486	-	71	79.042	ENSTBEG00000008718	HNRNPM	75	77.011	Tupaia_belangeri
ENSCGRG00001004486	-	99	72.552	ENSTTRG00000009769	HNRNPM	96	72.103	Tursiops_truncatus
ENSCGRG00001004486	-	99	74.036	ENSUAMG00000005710	HNRNPM	98	76.271	Ursus_americanus
ENSCGRG00001004486	-	80	77.222	ENSUMAG00000014575	HNRNPM	96	77.106	Ursus_maritimus
ENSCGRG00001004486	-	98	67.773	ENSVPAG00000004215	HNRNPM	94	69.510	Vicugna_pacos
ENSCGRG00001004486	-	99	73.047	ENSVVUG00000024984	HNRNPM	98	76.271	Vulpes_vulpes
ENSCGRG00001004486	-	99	48.430	ENSXETG00000001777	hnrnpm	98	48.657	Xenopus_tropicalis
ENSCGRG00001004486	-	93	49.038	ENSXCOG00000002651	hnrnpm	97	40.256	Xiphophorus_couchianus
ENSCGRG00001004486	-	95	42.643	ENSXMAG00000018502	hnrnpm	97	42.687	Xiphophorus_maculatus