EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00001004660 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: La ribonucleoprotein domain family member 1B
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 18236 bases
Position: chrscaffold_7:46213262-46231497
Accession: 100772564
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001003781	La	PF05383.17	1.5e-22	1	1
ENSCGRP00001003784	La	PF05383.17	3.1e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001005546	-	867	-	ENSCGRP00001003784	288 (aa)	-	-
ENSCGRT00001005543	-	1008	-	ENSCGRP00001003781	335 (aa)	XP_007607049	UPI0007DA8F9F

Gene Model

Click here to download ENSCGRG00001004660's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001004660's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001004660	-	100	89.552	ENSG00000138709	LARP1B	100	89.552	Homo_sapiens
ENSCGRG00001004660	-	100	91.343	ENSAMEG00000002748	LARP1B	100	91.343	Ailuropoda_melanoleuca
ENSCGRG00001004660	-	99	77.879	ENSANAG00000034618	LARP1B	96	77.879	Aotus_nancymaae
ENSCGRG00001004660	-	98	88.485	ENSBTAG00000012135	LARP1B	63	88.485	Bos_taurus
ENSCGRG00001004660	-	100	91.642	ENSCJAG00000003338	LARP1B	100	91.642	Callithrix_jacchus
ENSCGRG00001004660	-	100	91.667	ENSCAFG00020018899	LARP1B	100	91.667	Canis_lupus_dingo
ENSCGRG00001004660	-	100	88.927	ENSCHIG00000023144	LARP1B	100	88.927	Capra_hircus
ENSCGRG00001004660	-	99	87.108	ENSTSYG00000002037	-	99	87.108	Carlito_syrichta
ENSCGRG00001004660	-	76	94.643	ENSCPOG00000034668	-	93	94.643	Cavia_porcellus
ENSCGRG00001004660	-	99	91.018	ENSCCAG00000021948	LARP1B	99	91.018	Cebus_capucinus
ENSCGRG00001004660	-	100	87.164	ENSCATG00000013541	LARP1B	100	87.164	Cercocebus_atys
ENSCGRG00001004660	-	100	86.806	ENSCLAG00000006448	-	100	86.806	Chinchilla_lanigera
ENSCGRG00001004660	-	100	90.972	ENSCANG00000026958	LARP1B	100	90.972	Colobus_angolensis_palliatus
ENSCGRG00001004660	-	100	99.701	ENSCGRG00000001914	-	100	99.701	Cricetulus_griseus_crigri
ENSCGRG00001004660	-	98	89.970	ENSDNOG00000018765	-	64	89.970	Dasypus_novemcinctus
ENSCGRG00001004660	-	99	92.334	ENSEASG00005018106	LARP1B	99	92.334	Equus_asinus_asinus
ENSCGRG00001004660	-	100	91.045	ENSFCAG00000014650	-	100	91.045	Felis_catus
ENSCGRG00001004660	-	100	89.552	ENSGGOG00000015900	LARP1B	100	89.552	Gorilla_gorilla
ENSCGRG00001004660	-	98	75.076	ENSHGLG00000013922	-	96	74.772	Heterocephalus_glaber_female
ENSCGRG00001004660	-	100	86.986	ENSHGLG00000006728	-	99	86.986	Heterocephalus_glaber_female
ENSCGRG00001004660	-	100	87.847	ENSHGLG00100014041	-	96	86.866	Heterocephalus_glaber_male
ENSCGRG00001004660	-	98	75.076	ENSHGLG00100016491	-	96	74.772	Heterocephalus_glaber_male
ENSCGRG00001004660	-	96	72.274	ENSSTOG00000034510	-	87	72.274	Ictidomys_tridecemlineatus
ENSCGRG00001004660	-	90	76.062	ENSSTOG00000033183	-	97	75.697	Ictidomys_tridecemlineatus
ENSCGRG00001004660	-	100	90.311	ENSSTOG00000008596	-	100	90.311	Ictidomys_tridecemlineatus
ENSCGRG00001004660	-	99	81.571	ENSSTOG00000021917	-	94	80.967	Ictidomys_tridecemlineatus
ENSCGRG00001004660	-	99	90.941	ENSJJAG00000022360	Larp1b	99	90.941	Jaculus_jaculus
ENSCGRG00001004660	-	98	71.601	ENSLACG00000015247	LARP1B	85	69.578	Latimeria_chalumnae
ENSCGRG00001004660	-	99	92.262	ENSLAFG00000008473	-	99	92.262	Loxodonta_africana
ENSCGRG00001004660	-	100	65.625	ENSMFAG00000003306	-	93	87.586	Macaca_fascicularis
ENSCGRG00001004660	-	100	90.746	ENSMFAG00000002218	LARP1B	100	90.746	Macaca_fascicularis
ENSCGRG00001004660	-	100	90.746	ENSMMUG00000021347	LARP1B	100	90.746	Macaca_mulatta
ENSCGRG00001004660	-	75	88.112	ENSMNEG00000027747	-	89	88.112	Macaca_nemestrina
ENSCGRG00001004660	-	84	55.785	ENSMZEG00005002545	larp1b	54	55.185	Maylandia_zebra
ENSCGRG00001004660	-	100	99.104	ENSMAUG00000007879	-	100	99.104	Mesocricetus_auratus
ENSCGRG00001004660	-	98	82.867	ENSMICG00000037883	-	88	82.867	Microcebus_murinus
ENSCGRG00001004660	-	100	93.134	ENSMICG00000036111	LARP1B	100	93.134	Microcebus_murinus
ENSCGRG00001004660	-	97	69.018	ENSMICG00000028052	-	63	69.018	Microcebus_murinus
ENSCGRG00001004660	-	79	98.479	ENSMOCG00000001490	Larp1b	95	98.479	Microtus_ochrogaster
ENSCGRG00001004660	-	100	95.522	MGP_CAROLIEiJ_G0024962	Larp1b	100	95.522	Mus_caroli
ENSCGRG00001004660	-	100	96.418	ENSMUSG00000025762	Larp1b	100	96.418	Mus_musculus
ENSCGRG00001004660	-	100	96.119	MGP_PahariEiJ_G0026403	Larp1b	100	96.119	Mus_pahari
ENSCGRG00001004660	-	100	96.418	MGP_SPRETEiJ_G0025897	Larp1b	100	96.418	Mus_spretus
ENSCGRG00001004660	-	100	89.851	ENSNLEG00000013819	LARP1B	100	89.851	Nomascus_leucogenys
ENSCGRG00001004660	-	100	86.458	ENSODEG00000001292	-	100	86.458	Octodon_degus
ENSCGRG00001004660	-	100	89.254	ENSPPAG00000030439	LARP1B	100	89.254	Pan_paniscus
ENSCGRG00001004660	-	100	91.045	ENSPPRG00000002743	-	100	91.045	Panthera_pardus
ENSCGRG00001004660	-	100	91.045	ENSPTIG00000011225	LARP1B	100	91.045	Panthera_tigris_altaica
ENSCGRG00001004660	-	100	89.552	ENSPTRG00000016437	LARP1B	100	89.552	Pan_troglodytes
ENSCGRG00001004660	-	100	90.448	ENSPANG00000012488	LARP1B	100	90.448	Papio_anubis
ENSCGRG00001004660	-	99	85.672	ENSPCIG00000026516	LARP1B	87	86.364	Phascolarctos_cinereus
ENSCGRG00001004660	-	99	51.771	ENSPFOG00000022837	-	52	51.499	Poecilia_formosa
ENSCGRG00001004660	-	79	60.965	ENSPREG00000005955	-	89	55.986	Poecilia_reticulata
ENSCGRG00001004660	-	100	92.239	ENSPCOG00000021874	LARP1B	100	92.239	Propithecus_coquereli
ENSCGRG00001004660	-	100	97.612	ENSRNOG00000038366	Larp1b	100	97.612	Rattus_norvegicus
ENSCGRG00001004660	-	100	81.194	ENSRBIG00000038568	-	92	81.194	Rhinopithecus_bieti
ENSCGRG00001004660	-	100	88.358	ENSRBIG00000039982	-	100	87.761	Rhinopithecus_bieti
ENSCGRG00001004660	-	100	90.746	ENSRROG00000030771	LARP1B	100	90.746	Rhinopithecus_roxellana
ENSCGRG00001004660	-	100	82.699	ENSRROG00000038525	-	96	82.699	Rhinopithecus_roxellana
ENSCGRG00001004660	-	98	89.666	ENSSSCG00000034280	LARP1B	63	89.666	Sus_scrofa
ENSCGRG00001004660	-	99	55.052	ENSSSCG00000040491	-	99	77.778	Sus_scrofa
ENSCGRG00001004660	-	100	80.597	ENSUAMG00000016938	-	91	94.675	Ursus_americanus
ENSCGRG00001004660	-	98	90.578	ENSVVUG00000011307	LARP1B	65	90.578	Vulpes_vulpes