EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001005262 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 919 bases
Position: chrscaffold_39:13741079-13741997
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001004189	Brix	PF04427.18	9e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001006224	-	822	-	ENSCGRP00001004189	273 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001005262's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001005262's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001005262	-	97	80.795	ENSCGRG00001007331	-	99	80.795

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001005262	-	97	74.834	ENSG00000197498	RPF2	99	74.834	Homo_sapiens
ENSCGRG00001005262	-	95	62.162	ENSAPOG00000005714	rpf2	96	62.162	Acanthochromis_polyacanthus
ENSCGRG00001005262	-	97	74.172	ENSAMEG00000015753	RPF2	99	74.172	Ailuropoda_melanoleuca
ENSCGRG00001005262	-	95	61.486	ENSAOCG00000005173	rpf2	96	61.486	Amphiprion_ocellaris
ENSCGRG00001005262	-	95	61.486	ENSAPEG00000004003	rpf2	96	61.486	Amphiprion_percula
ENSCGRG00001005262	-	96	60.535	ENSATEG00000012818	rpf2	97	60.535	Anabas_testudineus
ENSCGRG00001005262	-	86	67.766	ENSAPLG00000008812	RPF2	100	67.766	Anas_platyrhynchos
ENSCGRG00001005262	-	95	65.878	ENSACAG00000011270	RPF2	96	65.878	Anolis_carolinensis
ENSCGRG00001005262	-	90	59.028	ENSANAG00000025459	-	96	59.028	Aotus_nancymaae
ENSCGRG00001005262	-	97	60.068	ENSANAG00000021067	-	98	60.068	Aotus_nancymaae
ENSCGRG00001005262	-	97	71.192	ENSANAG00000026549	-	99	71.192	Aotus_nancymaae
ENSCGRG00001005262	-	98	74.915	ENSANAG00000034834	-	99	74.915	Aotus_nancymaae
ENSCGRG00001005262	-	98	64.626	ENSANAG00000033736	-	99	66.327	Aotus_nancymaae
ENSCGRG00001005262	-	98	57.049	ENSAMXG00000035201	rpf2	99	57.049	Astyanax_mexicanus
ENSCGRG00001005262	-	97	75.166	ENSBTAG00000016584	RPF2	99	75.166	Bos_taurus
ENSCGRG00001005262	-	90	35.563	WBGene00021830	Y54E10A.10	96	35.563	Caenorhabditis_elegans
ENSCGRG00001005262	-	97	75.166	ENSCJAG00000038330	RPF2	99	75.166	Callithrix_jacchus
ENSCGRG00001005262	-	97	74.834	ENSCAFG00000003918	RPF2	99	74.834	Canis_familiaris
ENSCGRG00001005262	-	97	70.530	ENSCHIG00000022499	RPF2	99	70.530	Capra_hircus
ENSCGRG00001005262	-	97	73.179	ENSTSYG00000013924	RPF2	99	73.179	Carlito_syrichta
ENSCGRG00001005262	-	97	59.060	ENSCAPG00000014257	RPF2	98	59.060	Cavia_aperea
ENSCGRG00001005262	-	97	76.159	ENSCPOG00000006797	RPF2	99	76.159	Cavia_porcellus
ENSCGRG00001005262	-	98	60.473	ENSCCAG00000028553	-	98	60.751	Cebus_capucinus
ENSCGRG00001005262	-	98	74.098	ENSCCAG00000030365	-	99	74.098	Cebus_capucinus
ENSCGRG00001005262	-	97	75.166	ENSCCAG00000030864	-	99	75.166	Cebus_capucinus
ENSCGRG00001005262	-	94	60.204	ENSCCAG00000028906	-	98	63.519	Cebus_capucinus
ENSCGRG00001005262	-	84	64.341	ENSCATG00000029725	-	98	76.786	Cercocebus_atys
ENSCGRG00001005262	-	97	61.644	ENSCATG00000034352	-	98	61.644	Cercocebus_atys
ENSCGRG00001005262	-	94	63.087	ENSCLAG00000010874	-	99	63.087	Chinchilla_lanigera
ENSCGRG00001005262	-	97	76.159	ENSCLAG00000010393	-	99	76.159	Chinchilla_lanigera
ENSCGRG00001005262	-	83	53.435	ENSCLAG00000013252	-	96	53.435	Chinchilla_lanigera
ENSCGRG00001005262	-	97	69.967	ENSCHOG00000005865	RPF2	99	69.967	Choloepus_hoffmanni
ENSCGRG00001005262	-	95	68.456	ENSCPBG00000006504	RPF2	97	68.456	Chrysemys_picta_bellii
ENSCGRG00001005262	-	90	48.239	ENSCING00000008090	-	98	46.865	Ciona_intestinalis
ENSCGRG00001005262	-	91	48.601	ENSCSAVG00000010672	-	96	48.601	Ciona_savignyi
ENSCGRG00001005262	-	97	75.166	ENSCANG00000030665	RPF2	99	75.166	Colobus_angolensis_palliatus
ENSCGRG00001005262	-	96	79.734	ENSCGRG00000006083	Rpf2	98	79.734	Cricetulus_griseus_crigri
ENSCGRG00001005262	-	95	58.784	ENSCSEG00000015725	rpf2	97	58.784	Cynoglossus_semilaevis
ENSCGRG00001005262	-	95	59.797	ENSCVAG00000001072	rpf2	97	59.797	Cyprinodon_variegatus
ENSCGRG00001005262	-	97	57.285	ENSDARG00000043960	rpf2	98	57.285	Danio_rerio
ENSCGRG00001005262	-	62	70.000	ENSDNOG00000039270	RPF2	97	70.000	Dasypus_novemcinctus
ENSCGRG00001005262	-	81	54.299	ENSDORG00000026915	Rpf2	100	54.299	Dipodomys_ordii
ENSCGRG00001005262	-	92	35.986	FBgn0038585	Non3	93	35.906	Drosophila_melanogaster
ENSCGRG00001005262	-	92	44.637	ENSEBUG00000003640	rpf2	87	44.637	Eptatretus_burgeri
ENSCGRG00001005262	-	95	72.635	ENSEASG00005006927	-	99	71.854	Equus_asinus_asinus
ENSCGRG00001005262	-	95	76.689	ENSECAG00000017121	RPF2	99	75.828	Equus_caballus
ENSCGRG00001005262	-	75	89.552	ENSEEUG00000006169	RPF2	80	89.552	Erinaceus_europaeus
ENSCGRG00001005262	-	92	60.279	ENSELUG00000018518	rpf2	94	60.279	Esox_lucius
ENSCGRG00001005262	-	97	75.166	ENSFCAG00000001527	RPF2	99	75.166	Felis_catus
ENSCGRG00001005262	-	95	68.687	ENSFALG00000010816	RPF2	97	68.687	Ficedula_albicollis
ENSCGRG00001005262	-	97	74.834	ENSFDAG00000005811	-	99	74.834	Fukomys_damarensis
ENSCGRG00001005262	-	85	58.364	ENSFDAG00000016721	-	100	58.364	Fukomys_damarensis
ENSCGRG00001005262	-	97	59.136	ENSFHEG00000011243	rpf2	97	59.136	Fundulus_heteroclitus
ENSCGRG00001005262	-	95	48.161	ENSGMOG00000002521	rpf2	100	48.161	Gadus_morhua
ENSCGRG00001005262	-	95	68.350	ENSGALG00000037087	RPF2	97	68.350	Gallus_gallus
ENSCGRG00001005262	-	96	59.866	ENSGAFG00000009537	rpf2	98	59.866	Gambusia_affinis
ENSCGRG00001005262	-	95	59.797	ENSGACG00000006507	rpf2	96	59.797	Gasterosteus_aculeatus
ENSCGRG00001005262	-	95	64.430	ENSGAGG00000016221	RPF2	97	64.430	Gopherus_agassizii
ENSCGRG00001005262	-	97	64.726	ENSGGOG00000001469	RPF2	98	64.726	Gorilla_gorilla
ENSCGRG00001005262	-	91	68.881	ENSGGOG00000024187	-	100	68.881	Gorilla_gorilla
ENSCGRG00001005262	-	95	60.473	ENSHBUG00000021805	rpf2	96	60.473	Haplochromis_burtoni
ENSCGRG00001005262	-	90	70.567	ENSHGLG00000012697	-	98	70.567	Heterocephalus_glaber_female
ENSCGRG00001005262	-	97	74.503	ENSHGLG00000001322	RPF2	99	74.503	Heterocephalus_glaber_female
ENSCGRG00001005262	-	99	67.110	ENSHGLG00000012500	-	81	67.320	Heterocephalus_glaber_female
ENSCGRG00001005262	-	91	63.830	ENSHGLG00100002981	-	100	63.830	Heterocephalus_glaber_male
ENSCGRG00001005262	-	90	70.567	ENSHGLG00100000462	-	98	70.567	Heterocephalus_glaber_male
ENSCGRG00001005262	-	97	74.503	ENSHGLG00100012131	RPF2	99	74.503	Heterocephalus_glaber_male
ENSCGRG00001005262	-	85	57.621	ENSHGLG00100009310	-	99	59.480	Heterocephalus_glaber_male
ENSCGRG00001005262	-	99	67.110	ENSHGLG00100012473	-	99	67.320	Heterocephalus_glaber_male
ENSCGRG00001005262	-	96	59.532	ENSHCOG00000000225	rpf2	98	59.532	Hippocampus_comes
ENSCGRG00001005262	-	92	54.804	ENSIPUG00000016288	rpf2	93	54.804	Ictalurus_punctatus
ENSCGRG00001005262	-	97	69.455	ENSSTOG00000013114	RPF2	98	69.455	Ictidomys_tridecemlineatus
ENSCGRG00001005262	-	95	73.196	ENSJJAG00000009092	Rpf2	99	72.662	Jaculus_jaculus
ENSCGRG00001005262	-	96	59.866	ENSKMAG00000014609	rpf2	97	59.866	Kryptolebias_marmoratus
ENSCGRG00001005262	-	95	61.149	ENSLBEG00000011907	rpf2	96	55.822	Labrus_bergylta
ENSCGRG00001005262	-	95	61.953	ENSLACG00000003942	RPF2	96	61.953	Latimeria_chalumnae
ENSCGRG00001005262	-	92	61.724	ENSLOCG00000016992	rpf2	94	61.724	Lepisosteus_oculatus
ENSCGRG00001005262	-	99	72.549	ENSLAFG00000018219	RPF2	99	72.549	Loxodonta_africana
ENSCGRG00001005262	-	97	75.166	ENSMFAG00000000417	RPF2	99	75.166	Macaca_fascicularis
ENSCGRG00001005262	-	84	61.538	ENSMFAG00000036119	-	99	61.538	Macaca_fascicularis
ENSCGRG00001005262	-	97	75.166	ENSMMUG00000021532	RPF2	99	75.166	Macaca_mulatta
ENSCGRG00001005262	-	97	60.678	ENSMMUG00000042376	-	99	60.678	Macaca_mulatta
ENSCGRG00001005262	-	97	65.411	ENSMNEG00000031683	RPF2	98	65.411	Macaca_nemestrina
ENSCGRG00001005262	-	97	63.668	ENSMLEG00000042472	-	99	63.668	Mandrillus_leucophaeus
ENSCGRG00001005262	-	95	59.459	ENSMAMG00000004267	rpf2	96	59.459	Mastacembelus_armatus
ENSCGRG00001005262	-	95	60.473	ENSMZEG00005015632	rpf2	96	60.473	Maylandia_zebra
ENSCGRG00001005262	-	95	67.677	ENSMGAG00000013429	RPF2	97	67.677	Meleagris_gallopavo
ENSCGRG00001005262	-	78	61.435	ENSMAUG00000005049	Rpf2	100	61.435	Mesocricetus_auratus
ENSCGRG00001005262	-	97	74.172	ENSMICG00000032086	-	99	74.172	Microcebus_murinus
ENSCGRG00001005262	-	95	66.102	ENSMICG00000038169	-	99	65.781	Microcebus_murinus
ENSCGRG00001005262	-	97	65.734	ENSMICG00000028979	-	99	65.734	Microcebus_murinus
ENSCGRG00001005262	-	96	77.592	ENSMOCG00000005634	Rpf2	97	77.592	Microtus_ochrogaster
ENSCGRG00001005262	-	92	54.035	ENSMMOG00000014844	rpf2	95	54.035	Mola_mola
ENSCGRG00001005262	-	94	69.728	ENSMODG00000017919	RPF2	97	69.728	Monodelphis_domestica
ENSCGRG00001005262	-	96	60.870	ENSMALG00000019046	rpf2	97	60.870	Monopterus_albus
ENSCGRG00001005262	-	97	78.808	MGP_CAROLIEiJ_G0015254	Rpf2	99	78.808	Mus_caroli
ENSCGRG00001005262	-	97	78.477	ENSMUSG00000038510	Rpf2	99	78.477	Mus_musculus
ENSCGRG00001005262	-	97	78.146	MGP_PahariEiJ_G0030671	Rpf2	98	78.146	Mus_pahari
ENSCGRG00001005262	-	97	78.146	MGP_SPRETEiJ_G0016063	Rpf2	98	78.146	Mus_spretus
ENSCGRG00001005262	-	97	75.497	ENSMPUG00000010183	RPF2	86	75.497	Mustela_putorius_furo
ENSCGRG00001005262	-	78	73.200	ENSMLUG00000005676	RPF2	98	73.200	Myotis_lucifugus
ENSCGRG00001005262	-	97	77.152	ENSNGAG00000009701	Rpf2	99	77.152	Nannospalax_galili
ENSCGRG00001005262	-	95	60.473	ENSNBRG00000011087	rpf2	96	60.473	Neolamprologus_brichardi
ENSCGRG00001005262	-	73	73.191	ENSNLEG00000011848	-	98	73.191	Nomascus_leucogenys
ENSCGRG00001005262	-	82	72.308	ENSNLEG00000033597	-	85	72.308	Nomascus_leucogenys
ENSCGRG00001005262	-	97	74.503	ENSNLEG00000027819	RPF2	99	74.503	Nomascus_leucogenys
ENSCGRG00001005262	-	94	58.503	ENSMEUG00000006421	RPF2	99	58.503	Notamacropus_eugenii
ENSCGRG00001005262	-	94	75.850	ENSODEG00000013529	-	96	75.850	Octodon_degus
ENSCGRG00001005262	-	91	67.870	ENSODEG00000002442	-	98	67.870	Octodon_degus
ENSCGRG00001005262	-	87	62.182	ENSODEG00000003531	-	100	62.182	Octodon_degus
ENSCGRG00001005262	-	83	63.258	ENSODEG00000006939	-	96	63.258	Octodon_degus
ENSCGRG00001005262	-	97	71.523	ENSODEG00000019144	-	99	71.523	Octodon_degus
ENSCGRG00001005262	-	97	71.329	ENSODEG00000006584	-	99	71.329	Octodon_degus
ENSCGRG00001005262	-	95	60.473	ENSONIG00000011383	rpf2	96	60.473	Oreochromis_niloticus
ENSCGRG00001005262	-	97	73.841	ENSOCUG00000016028	RPF2	99	73.841	Oryctolagus_cuniculus
ENSCGRG00001005262	-	95	59.797	ENSORLG00000015183	rpf2	96	59.797	Oryzias_latipes
ENSCGRG00001005262	-	95	59.797	ENSORLG00020008756	rpf2	93	58.333	Oryzias_latipes_hni
ENSCGRG00001005262	-	95	59.797	ENSORLG00015003841	RPF2	96	59.797	Oryzias_latipes_hsok
ENSCGRG00001005262	-	100	59.677	ENSOMEG00000011508	rpf2	99	59.677	Oryzias_melastigma
ENSCGRG00001005262	-	97	75.497	ENSOGAG00000007438	RPF2	99	75.497	Otolemur_garnettii
ENSCGRG00001005262	-	97	75.166	ENSOARG00000009886	-	99	75.166	Ovis_aries
ENSCGRG00001005262	-	97	75.166	ENSOARG00000015548	-	99	75.166	Ovis_aries
ENSCGRG00001005262	-	89	69.892	ENSPPAG00000032089	-	99	69.892	Pan_paniscus
ENSCGRG00001005262	-	97	74.834	ENSPPAG00000035622	RPF2	99	74.834	Pan_paniscus
ENSCGRG00001005262	-	97	75.497	ENSPPRG00000000320	-	99	75.497	Panthera_pardus
ENSCGRG00001005262	-	93	65.734	ENSPPRG00000008363	-	95	65.734	Panthera_pardus
ENSCGRG00001005262	-	97	75.497	ENSPTIG00000002060	RPF2	99	75.497	Panthera_tigris_altaica
ENSCGRG00001005262	-	97	74.834	ENSPTRG00000018503	RPF2	99	74.834	Pan_troglodytes
ENSCGRG00001005262	-	97	75.166	ENSPANG00000018834	RPF2	99	75.166	Papio_anubis
ENSCGRG00001005262	-	93	60.345	ENSPKIG00000019506	rpf2	95	60.345	Paramormyrops_kingsleyae
ENSCGRG00001005262	-	95	68.456	ENSPSIG00000014887	RPF2	97	68.456	Pelodiscus_sinensis
ENSCGRG00001005262	-	90	75.180	ENSPEMG00000011413	Rpf2	99	75.180	Peromyscus_maniculatus_bairdii
ENSCGRG00001005262	-	95	70.608	ENSPCIG00000028172	RPF2	96	70.234	Phascolarctos_cinereus
ENSCGRG00001005262	-	96	60.201	ENSPFOG00000003396	rpf2	98	60.201	Poecilia_formosa
ENSCGRG00001005262	-	96	60.201	ENSPLAG00000001226	rpf2	98	60.201	Poecilia_latipinna
ENSCGRG00001005262	-	96	60.201	ENSPMEG00000007781	rpf2	98	60.201	Poecilia_mexicana
ENSCGRG00001005262	-	96	59.532	ENSPREG00000020525	rpf2	98	59.532	Poecilia_reticulata
ENSCGRG00001005262	-	97	75.166	ENSPPYG00000016925	RPF2	99	75.166	Pongo_abelii
ENSCGRG00001005262	-	58	69.744	ENSPCAG00000002562	RPF2	79	69.744	Procavia_capensis
ENSCGRG00001005262	-	96	66.316	ENSPCOG00000012785	RPF2	98	66.084	Propithecus_coquereli
ENSCGRG00001005262	-	76	73.770	ENSPVAG00000003446	RPF2	82	73.200	Pteropus_vampyrus
ENSCGRG00001005262	-	94	59.044	ENSPNAG00000000082	rpf2	95	59.044	Pygocentrus_nattereri
ENSCGRG00001005262	-	97	78.477	ENSRNOG00000000587	Rpf2	99	78.477	Rattus_norvegicus
ENSCGRG00001005262	-	95	73.649	ENSRBIG00000038389	RPF2	99	73.179	Rhinopithecus_bieti
ENSCGRG00001005262	-	78	71.486	ENSRROG00000036685	-	95	71.486	Rhinopithecus_roxellana
ENSCGRG00001005262	-	96	74.916	ENSRROG00000036457	RPF2	98	74.916	Rhinopithecus_roxellana
ENSCGRG00001005262	-	84	66.171	ENSRROG00000039510	-	99	66.171	Rhinopithecus_roxellana
ENSCGRG00001005262	-	89	59.286	ENSRROG00000028992	-	94	59.286	Rhinopithecus_roxellana
ENSCGRG00001005262	-	93	36.424	YKR081C	-	88	36.424	Saccharomyces_cerevisiae
ENSCGRG00001005262	-	88	70.943	ENSSBOG00000022486	-	96	70.943	Saimiri_boliviensis_boliviensis
ENSCGRG00001005262	-	78	64.807	ENSSBOG00000030264	-	92	64.807	Saimiri_boliviensis_boliviensis
ENSCGRG00001005262	-	95	58.163	ENSSBOG00000025434	-	99	58.163	Saimiri_boliviensis_boliviensis
ENSCGRG00001005262	-	76	68.807	ENSSBOG00000029182	-	93	68.807	Saimiri_boliviensis_boliviensis
ENSCGRG00001005262	-	98	58.163	ENSSBOG00000034420	-	99	58.163	Saimiri_boliviensis_boliviensis
ENSCGRG00001005262	-	97	70.530	ENSSHAG00000002212	RPF2	98	70.530	Sarcophilus_harrisii
ENSCGRG00001005262	-	97	57.190	ENSSFOG00015020916	rpf2	100	57.190	Scleropages_formosus
ENSCGRG00001005262	-	95	59.596	ENSSMAG00000017499	rpf2	96	59.596	Scophthalmus_maximus
ENSCGRG00001005262	-	94	56.667	ENSSDUG00000010383	rpf2	95	56.667	Seriola_dumerili
ENSCGRG00001005262	-	95	60.473	ENSSLDG00000022111	rpf2	96	60.473	Seriola_lalandi_dorsalis
ENSCGRG00001005262	-	97	59.136	ENSSARG00000012063	RPF2	99	59.136	Sorex_araneus
ENSCGRG00001005262	-	94	63.636	ENSSPUG00000005108	RPF2	96	63.636	Sphenodon_punctatus
ENSCGRG00001005262	-	95	61.149	ENSSPAG00000008035	rpf2	96	61.149	Stegastes_partitus
ENSCGRG00001005262	-	97	75.166	ENSSSCG00000004394	RPF2	99	75.166	Sus_scrofa
ENSCGRG00001005262	-	95	68.814	ENSTGUG00000012034	RPF2	96	68.814	Taeniopygia_guttata
ENSCGRG00001005262	-	99	56.818	ENSTRUG00000018264	rpf2	100	56.818	Takifugu_rubripes
ENSCGRG00001005262	-	96	59.722	ENSTNIG00000002749	rpf2	97	59.722	Tetraodon_nigroviridis
ENSCGRG00001005262	-	78	67.600	ENSTBEG00000017151	RPF2	82	67.600	Tupaia_belangeri
ENSCGRG00001005262	-	97	75.497	ENSTTRG00000012357	RPF2	99	75.497	Tursiops_truncatus
ENSCGRG00001005262	-	97	75.166	ENSUAMG00000013497	RPF2	99	75.166	Ursus_americanus
ENSCGRG00001005262	-	97	74.834	ENSUMAG00000025488	RPF2	99	74.834	Ursus_maritimus
ENSCGRG00001005262	-	96	75.839	ENSVPAG00000009562	RPF2	98	75.839	Vicugna_pacos
ENSCGRG00001005262	-	89	64.727	ENSVVUG00000021231	-	98	64.727	Vulpes_vulpes
ENSCGRG00001005262	-	97	69.932	ENSVVUG00000006593	-	99	69.932	Vulpes_vulpes
ENSCGRG00001005262	-	95	64.310	ENSXETG00000021335	rpf2	96	64.310	Xenopus_tropicalis
ENSCGRG00001005262	-	95	57.095	ENSXCOG00000001590	rpf2	97	57.095	Xiphophorus_couchianus
ENSCGRG00001005262	-	95	55.137	ENSXMAG00000021706	rpf2	97	55.137	Xiphophorus_maculatus