EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001005461 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 171 bases
Position: chrscaffold_0:16277046-16277216
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001004316	Ribosomal_S14	PF00253.21	2.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001006446	-	171	-	ENSCGRP00001004316	56 (aa)	-	UPI00022F3D63

Gene Model

Click here to download ENSCGRG00001005461's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001005461's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001005461	-	100	80.357	ENSCGRG00001008847	-	100	80.357
ENSCGRG00001005461	-	100	76.786	ENSCGRG00001000990	-	66	76.786
ENSCGRG00001005461	-	100	83.929	ENSCGRG00001010167	-	100	83.929
ENSCGRG00001005461	-	100	82.143	ENSCGRG00001015495	-	100	82.143
ENSCGRG00001005461	-	100	82.143	ENSCGRG00001011398	-	100	82.143
ENSCGRG00001005461	-	100	85.714	ENSCGRG00001001537	-	92	85.714
ENSCGRG00001005461	-	100	87.500	ENSCGRG00001020113	Rps29	100	87.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001005461	-	100	80.357	ENSACIG00000003518	rps29	75	80.357	Amphilophus_citrinellus
ENSCGRG00001005461	-	98	87.273	ENSANAG00000024423	-	100	87.273	Aotus_nancymaae
ENSCGRG00001005461	-	89	60.000	ENSACLG00000000915	rps29	59	60.000	Astatotilapia_calliptera
ENSCGRG00001005461	-	100	87.500	ENSBTAG00000052337	RPS29	100	87.500	Bos_taurus
ENSCGRG00001005461	-	100	80.357	ENSCJAG00000031814	-	100	80.357	Callithrix_jacchus
ENSCGRG00001005461	-	100	87.500	ENSCJAG00000039096	-	100	87.500	Callithrix_jacchus
ENSCGRG00001005461	-	98	69.091	ENSCAFG00020021989	-	50	69.091	Canis_lupus_dingo
ENSCGRG00001005461	-	100	75.000	ENSCAFG00020002956	-	100	75.000	Canis_lupus_dingo
ENSCGRG00001005461	-	100	82.143	ENSCAFG00020003021	-	100	82.143	Canis_lupus_dingo
ENSCGRG00001005461	-	100	89.286	ENSCHIG00000010682	-	100	89.286	Capra_hircus
ENSCGRG00001005461	-	100	87.500	ENSTSYG00000030415	-	100	87.500	Carlito_syrichta
ENSCGRG00001005461	-	100	73.214	ENSTSYG00000012410	-	100	73.214	Carlito_syrichta
ENSCGRG00001005461	-	100	87.500	ENSCPOG00000032637	-	100	87.500	Cavia_porcellus
ENSCGRG00001005461	-	100	87.500	ENSCCAG00000032090	-	100	87.500	Cebus_capucinus
ENSCGRG00001005461	-	100	85.714	ENSCCAG00000032225	-	100	85.714	Cebus_capucinus
ENSCGRG00001005461	-	100	87.500	ENSCCAG00000001210	-	100	87.500	Cebus_capucinus
ENSCGRG00001005461	-	100	87.500	ENSCCAG00000019033	-	100	87.500	Cebus_capucinus
ENSCGRG00001005461	-	100	89.286	ENSCCAG00000019847	-	100	89.286	Cebus_capucinus
ENSCGRG00001005461	-	100	85.714	ENSCCAG00000020608	-	100	85.714	Cebus_capucinus
ENSCGRG00001005461	-	100	64.286	ENSCATG00000041319	-	100	64.286	Cercocebus_atys
ENSCGRG00001005461	-	100	87.500	ENSCATG00000017816	-	100	87.500	Cercocebus_atys
ENSCGRG00001005461	-	100	87.500	ENSCATG00000011469	-	100	87.500	Cercocebus_atys
ENSCGRG00001005461	-	100	87.500	ENSCSAG00000015276	-	100	87.500	Chlorocebus_sabaeus
ENSCGRG00001005461	-	91	70.588	ENSCHOG00000011358	-	93	70.588	Choloepus_hoffmanni
ENSCGRG00001005461	-	98	70.909	ENSCPBG00000015078	-	64	70.909	Chrysemys_picta_bellii
ENSCGRG00001005461	-	100	82.143	ENSCPBG00000019385	-	100	82.143	Chrysemys_picta_bellii
ENSCGRG00001005461	-	100	87.500	ENSCPBG00000018320	-	100	87.500	Chrysemys_picta_bellii
ENSCGRG00001005461	-	100	89.286	ENSCANG00000010019	-	100	89.286	Colobus_angolensis_palliatus
ENSCGRG00001005461	-	100	87.500	ENSCANG00000019407	-	100	87.500	Colobus_angolensis_palliatus
ENSCGRG00001005461	-	100	87.500	ENSCANG00000037526	-	100	87.500	Colobus_angolensis_palliatus
ENSCGRG00001005461	-	100	100.000	ENSCGRG00000019460	-	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001005461	-	100	71.429	ENSCGRG00000009208	-	100	71.429	Cricetulus_griseus_crigri
ENSCGRG00001005461	-	100	76.786	ENSCGRG00000019197	-	66	76.786	Cricetulus_griseus_crigri
ENSCGRG00001005461	-	100	85.714	ENSCGRG00000018591	-	92	85.714	Cricetulus_griseus_crigri
ENSCGRG00001005461	-	100	83.929	ENSCGRG00000019055	-	100	83.929	Cricetulus_griseus_crigri
ENSCGRG00001005461	-	98	83.636	ENSCSEG00000001818	rps29	60	83.636	Cynoglossus_semilaevis
ENSCGRG00001005461	-	100	83.929	ENSDARG00000041232	rps29	100	83.929	Danio_rerio
ENSCGRG00001005461	-	100	87.500	ENSDORG00000028731	-	100	87.500	Dipodomys_ordii
ENSCGRG00001005461	-	100	82.143	ENSDORG00000026532	-	100	82.143	Dipodomys_ordii
ENSCGRG00001005461	-	100	75.000	ENSDORG00000013874	-	100	75.000	Dipodomys_ordii
ENSCGRG00001005461	-	100	71.429	ENSEBUG00000011966	rps29	65	71.429	Eptatretus_burgeri
ENSCGRG00001005461	-	98	63.636	ENSEASG00005020582	-	95	63.636	Equus_asinus_asinus
ENSCGRG00001005461	-	98	83.636	ENSEASG00005007821	-	65	83.636	Equus_asinus_asinus
ENSCGRG00001005461	-	98	83.636	ENSECAG00000011782	RPS29	65	83.636	Equus_caballus
ENSCGRG00001005461	-	100	76.786	ENSFCAG00000024162	-	100	76.786	Felis_catus
ENSCGRG00001005461	-	100	87.500	ENSFALG00000001808	-	92	87.500	Ficedula_albicollis
ENSCGRG00001005461	-	100	87.500	ENSFALG00000001738	-	92	87.500	Ficedula_albicollis
ENSCGRG00001005461	-	100	85.714	ENSGACG00000012858	rps29	100	85.714	Gasterosteus_aculeatus
ENSCGRG00001005461	-	84	80.851	ENSGAGG00000025088	-	57	80.851	Gopherus_agassizii
ENSCGRG00001005461	-	98	76.364	ENSGAGG00000016743	-	92	76.364	Gopherus_agassizii
ENSCGRG00001005461	-	100	87.500	ENSGGOG00000042996	-	100	87.500	Gorilla_gorilla
ENSCGRG00001005461	-	100	83.929	ENSGGOG00000042896	-	100	83.929	Gorilla_gorilla
ENSCGRG00001005461	-	100	83.929	ENSHBUG00000018115	rps29	100	83.929	Haplochromis_burtoni
ENSCGRG00001005461	-	100	71.429	ENSJJAG00000011627	-	100	71.429	Jaculus_jaculus
ENSCGRG00001005461	-	100	87.500	ENSLAFG00000031145	-	100	87.500	Loxodonta_africana
ENSCGRG00001005461	-	100	87.500	ENSMFAG00000026635	-	100	87.500	Macaca_fascicularis
ENSCGRG00001005461	-	100	85.714	ENSMMUG00000040278	-	100	85.714	Macaca_mulatta
ENSCGRG00001005461	-	100	87.500	ENSMMUG00000008939	-	100	87.500	Macaca_mulatta
ENSCGRG00001005461	-	100	87.500	ENSMMUG00000043502	-	100	87.500	Macaca_mulatta
ENSCGRG00001005461	-	100	76.786	ENSMMUG00000043202	-	100	76.786	Macaca_mulatta
ENSCGRG00001005461	-	100	82.143	ENSMMUG00000032153	-	100	82.143	Macaca_mulatta
ENSCGRG00001005461	-	100	87.500	ENSMNEG00000037893	-	100	87.500	Macaca_nemestrina
ENSCGRG00001005461	-	100	87.500	ENSMNEG00000027952	-	100	87.500	Macaca_nemestrina
ENSCGRG00001005461	-	100	85.714	ENSMLEG00000026733	-	100	85.714	Mandrillus_leucophaeus
ENSCGRG00001005461	-	100	83.929	ENSMZEG00005012261	rps29	100	83.929	Maylandia_zebra
ENSCGRG00001005461	-	100	87.500	ENSMGAG00000013705	-	100	87.500	Meleagris_gallopavo
ENSCGRG00001005461	-	63	88.571	ENSMAUG00000000899	-	100	88.571	Mesocricetus_auratus
ENSCGRG00001005461	-	100	80.357	ENSMAUG00000005362	-	100	80.357	Mesocricetus_auratus
ENSCGRG00001005461	-	98	80.000	ENSMAUG00000019410	-	100	80.000	Mesocricetus_auratus
ENSCGRG00001005461	-	100	85.714	ENSMICG00000041582	-	100	85.714	Microcebus_murinus
ENSCGRG00001005461	-	100	87.500	ENSMICG00000045654	-	100	87.500	Microcebus_murinus
ENSCGRG00001005461	-	100	87.500	ENSMOCG00000017681	Rps29	100	87.500	Microtus_ochrogaster
ENSCGRG00001005461	-	100	83.929	ENSMMOG00000005119	rps29	53	83.929	Mola_mola
ENSCGRG00001005461	-	100	82.143	ENSMODG00000025305	-	100	82.143	Monodelphis_domestica
ENSCGRG00001005461	-	100	87.500	MGP_CAROLIEiJ_G0017795	-	100	87.500	Mus_caroli
ENSCGRG00001005461	-	100	87.500	ENSMUSG00000034892	Rps29	100	87.500	Mus_musculus
ENSCGRG00001005461	-	100	87.500	MGP_PahariEiJ_G0029551	-	100	87.500	Mus_pahari
ENSCGRG00001005461	-	100	87.500	MGP_SPRETEiJ_G0018641	Rps29	100	87.500	Mus_spretus
ENSCGRG00001005461	-	100	80.357	MGP_SPRETEiJ_G0019597	-	92	80.357	Mus_spretus
ENSCGRG00001005461	-	98	87.273	ENSMLUG00000025007	-	100	87.273	Myotis_lucifugus
ENSCGRG00001005461	-	100	87.500	ENSMLUG00000025262	-	100	87.500	Myotis_lucifugus
ENSCGRG00001005461	-	100	78.571	ENSMLUG00000029871	-	100	78.571	Myotis_lucifugus
ENSCGRG00001005461	-	100	87.500	ENSNGAG00000013159	Rps29	100	87.500	Nannospalax_galili
ENSCGRG00001005461	-	100	75.000	ENSNGAG00000011632	-	100	75.000	Nannospalax_galili
ENSCGRG00001005461	-	100	80.357	ENSNBRG00000021854	rps29	70	80.357	Neolamprologus_brichardi
ENSCGRG00001005461	-	100	85.714	ENSNLEG00000018259	-	100	85.714	Nomascus_leucogenys
ENSCGRG00001005461	-	100	71.429	ENSNLEG00000031810	-	64	71.429	Nomascus_leucogenys
ENSCGRG00001005461	-	100	85.714	ENSODEG00000019960	-	100	85.714	Octodon_degus
ENSCGRG00001005461	-	93	82.692	ENSODEG00000019249	-	100	82.692	Octodon_degus
ENSCGRG00001005461	-	100	87.500	ENSODEG00000018519	-	100	87.500	Octodon_degus
ENSCGRG00001005461	-	100	83.929	ENSODEG00000019457	-	100	83.929	Octodon_degus
ENSCGRG00001005461	-	100	87.500	ENSODEG00000019220	-	100	87.500	Octodon_degus
ENSCGRG00001005461	-	100	83.929	ENSONIG00000000829	rps29	100	83.929	Oreochromis_niloticus
ENSCGRG00001005461	-	100	87.500	ENSOCUG00000027423	RPS29	100	87.500	Oryctolagus_cuniculus
ENSCGRG00001005461	-	98	83.636	ENSOMEG00000010831	rps29	69	83.636	Oryzias_melastigma
ENSCGRG00001005461	-	100	83.929	ENSOGAG00000032475	-	100	83.929	Otolemur_garnettii
ENSCGRG00001005461	-	100	83.929	ENSOGAG00000033843	-	100	83.929	Otolemur_garnettii
ENSCGRG00001005461	-	100	78.571	ENSOARG00000007891	-	92	78.571	Ovis_aries
ENSCGRG00001005461	-	100	85.714	ENSPPRG00000011061	-	100	85.714	Panthera_pardus
ENSCGRG00001005461	-	100	75.000	ENSPPRG00000017352	-	100	75.000	Panthera_pardus
ENSCGRG00001005461	-	100	87.500	ENSPPRG00000022391	-	100	87.500	Panthera_pardus
ENSCGRG00001005461	-	100	87.500	ENSPTIG00000006207	-	100	87.500	Panthera_tigris_altaica
ENSCGRG00001005461	-	100	87.500	ENSPANG00000033247	-	100	87.500	Papio_anubis
ENSCGRG00001005461	-	100	78.571	ENSPANG00000029212	-	100	78.571	Papio_anubis
ENSCGRG00001005461	-	100	87.500	ENSPANG00000023730	-	100	87.500	Papio_anubis
ENSCGRG00001005461	-	100	87.500	ENSPPYG00000005785	RPS29	100	87.500	Pongo_abelii
ENSCGRG00001005461	-	100	78.571	ENSPCOG00000015576	-	100	78.571	Propithecus_coquereli
ENSCGRG00001005461	-	100	87.500	ENSPCOG00000024671	-	100	87.500	Propithecus_coquereli
ENSCGRG00001005461	-	100	87.500	ENSRNOG00000032542	LOC108351482	100	87.500	Rattus_norvegicus
ENSCGRG00001005461	-	100	87.500	ENSRNOG00000028939	Rps29	100	87.500	Rattus_norvegicus
ENSCGRG00001005461	-	100	87.500	ENSRNOG00000004196	LOC108350501	100	87.500	Rattus_norvegicus
ENSCGRG00001005461	-	100	87.500	ENSRNOG00000029443	LOC108352650	100	87.500	Rattus_norvegicus
ENSCGRG00001005461	-	100	87.500	ENSRBIG00000017110	-	100	87.500	Rhinopithecus_bieti
ENSCGRG00001005461	-	100	87.500	ENSRBIG00000016462	-	100	87.500	Rhinopithecus_bieti
ENSCGRG00001005461	-	100	85.714	ENSRBIG00000020563	-	100	85.714	Rhinopithecus_bieti
ENSCGRG00001005461	-	100	85.714	ENSRBIG00000011261	-	100	85.714	Rhinopithecus_bieti
ENSCGRG00001005461	-	100	87.500	ENSRBIG00000007567	-	100	87.500	Rhinopithecus_bieti
ENSCGRG00001005461	-	100	83.929	ENSRROG00000017887	-	100	83.929	Rhinopithecus_roxellana
ENSCGRG00001005461	-	100	87.500	ENSRROG00000037175	-	100	87.500	Rhinopithecus_roxellana
ENSCGRG00001005461	-	100	87.500	ENSRROG00000009633	-	100	87.500	Rhinopithecus_roxellana
ENSCGRG00001005461	-	100	87.500	ENSRROG00000020854	-	100	87.500	Rhinopithecus_roxellana
ENSCGRG00001005461	-	100	87.500	ENSRROG00000009364	-	100	87.500	Rhinopithecus_roxellana
ENSCGRG00001005461	-	100	87.500	ENSRROG00000015879	-	100	87.500	Rhinopithecus_roxellana
ENSCGRG00001005461	-	100	87.500	ENSRROG00000011987	-	100	87.500	Rhinopithecus_roxellana
ENSCGRG00001005461	-	100	83.929	ENSSBOG00000009349	-	100	83.929	Saimiri_boliviensis_boliviensis
ENSCGRG00001005461	-	63	88.571	ENSSBOG00000029046	-	66	88.571	Saimiri_boliviensis_boliviensis
ENSCGRG00001005461	-	100	85.714	ENSSBOG00000019207	-	100	85.714	Saimiri_boliviensis_boliviensis
ENSCGRG00001005461	-	100	85.714	ENSSBOG00000012724	-	100	85.714	Saimiri_boliviensis_boliviensis
ENSCGRG00001005461	-	98	83.636	ENSSFOG00015000394	-	73	83.636	Scleropages_formosus
ENSCGRG00001005461	-	100	82.143	ENSSDUG00000009578	rps29	63	82.143	Seriola_dumerili
ENSCGRG00001005461	-	100	76.786	ENSSSCG00000037150	-	100	76.786	Sus_scrofa
ENSCGRG00001005461	-	100	80.357	ENSSSCG00000035779	-	100	80.357	Sus_scrofa
ENSCGRG00001005461	-	100	87.500	ENSSSCG00000038507	-	100	87.500	Sus_scrofa
ENSCGRG00001005461	-	100	71.429	ENSSSCG00000001855	-	100	71.429	Sus_scrofa
ENSCGRG00001005461	-	100	87.500	ENSUAMG00000022821	-	100	87.500	Ursus_americanus
ENSCGRG00001005461	-	70	76.923	ENSUAMG00000005201	-	74	76.923	Ursus_americanus
ENSCGRG00001005461	-	100	83.929	ENSUAMG00000016993	-	100	83.929	Ursus_americanus
ENSCGRG00001005461	-	100	76.786	ENSUAMG00000003050	-	100	76.786	Ursus_americanus
ENSCGRG00001005461	-	100	82.143	ENSUAMG00000002506	-	100	82.143	Ursus_americanus
ENSCGRG00001005461	-	98	85.455	ENSUAMG00000012422	-	54	85.455	Ursus_americanus
ENSCGRG00001005461	-	100	76.786	ENSUMAG00000008130	-	100	76.786	Ursus_maritimus
ENSCGRG00001005461	-	98	85.455	ENSUMAG00000007648	-	54	85.455	Ursus_maritimus
ENSCGRG00001005461	-	100	83.929	ENSUMAG00000019137	-	100	83.929	Ursus_maritimus
ENSCGRG00001005461	-	100	80.357	ENSUMAG00000012903	-	100	80.357	Ursus_maritimus
ENSCGRG00001005461	-	98	69.091	ENSVVUG00000029871	-	53	69.091	Vulpes_vulpes
ENSCGRG00001005461	-	100	83.929	ENSVVUG00000000785	-	100	83.929	Vulpes_vulpes
ENSCGRG00001005461	-	100	78.571	ENSVVUG00000016811	-	100	78.571	Vulpes_vulpes
ENSCGRG00001005461	-	100	87.500	ENSXETG00000027734	rps29	100	87.500	Xenopus_tropicalis
ENSCGRG00001005461	-	100	82.143	ENSXCOG00000007248	rps29	72	82.143	Xiphophorus_couchianus
ENSCGRG00001005461	-	80	84.444	ENSXMAG00000019760	-	80	84.444	Xiphophorus_maculatus