EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001005686 (Gene tree)
Gene ID: -
Gene Symbol: Vars
Alias: Bat-6|Bat6|D17H6S56E|G7a|Vars2
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 12276 bases
Position: chrscaffold_55:1844651-1856926
Accession: 90675
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001004518	tRNA-synt_1g	PF09334.11	7e-11	1	1
ENSCGRP00001004508	tRNA-synt_1g	PF09334.11	7.2e-11	1	1
ENSCGRP00001004518	Anticodon_1	PF08264.13	9e-33	1	1
ENSCGRP00001004508	Anticodon_1	PF08264.13	9.2e-33	1	1
ENSCGRP00001004518	tRNA-synt_1	PF00133.22	2.4e-202	1	1
ENSCGRP00001004508	tRNA-synt_1	PF00133.22	4.6e-199	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001006787	-	3795	-	ENSCGRP00001004518	1264 (aa)	-	-
ENSCGRT00001006774	-	3822	-	ENSCGRP00001004508	1273 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001005686's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001005686's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001005686	Vars	83	50.477	ENSCGRG00001021535	Vars2	92	52.064

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001005686	Vars	100	93.117	ENSG00000204394	VARS	100	93.117	Homo_sapiens
ENSCGRG00001005686	Vars	98	64.900	ENSAPOG00000020691	vars	99	64.578	Acanthochromis_polyacanthus
ENSCGRG00001005686	Vars	98	64.900	ENSAPOG00000020921	vars	99	64.578	Acanthochromis_polyacanthus
ENSCGRG00001005686	Vars	100	92.727	ENSAMEG00000006417	VARS	100	92.727	Ailuropoda_melanoleuca
ENSCGRG00001005686	Vars	100	65.412	ENSACIG00000013752	vars	100	65.094	Amphilophus_citrinellus
ENSCGRG00001005686	Vars	100	64.752	ENSAOCG00000002447	vars	100	64.437	Amphiprion_ocellaris
ENSCGRG00001005686	Vars	100	64.624	ENSAPEG00000010638	vars	99	64.564	Amphiprion_percula
ENSCGRG00001005686	Vars	100	64.539	ENSATEG00000020219	vars	100	64.224	Anabas_testudineus
ENSCGRG00001005686	Vars	90	70.598	ENSACAG00000029133	-	99	70.252	Anolis_carolinensis
ENSCGRG00001005686	Vars	100	92.801	ENSANAG00000015453	VARS	100	92.801	Aotus_nancymaae
ENSCGRG00001005686	Vars	100	64.341	ENSACLG00000025699	vars	97	64.025	Astatotilapia_calliptera
ENSCGRG00001005686	Vars	94	66.222	ENSAMXG00000017716	vars	95	66.222	Astyanax_mexicanus
ENSCGRG00001005686	Vars	100	92.484	ENSBTAG00000005631	VARS	100	92.484	Bos_taurus
ENSCGRG00001005686	Vars	100	92.959	ENSCJAG00000002604	VARS	100	92.959	Callithrix_jacchus
ENSCGRG00001005686	Vars	100	92.247	ENSCAFG00000000636	VARS	100	92.247	Canis_familiaris
ENSCGRG00001005686	Vars	94	92.483	ENSCAFG00020020790	VARS	96	92.483	Canis_lupus_dingo
ENSCGRG00001005686	Vars	100	92.801	ENSCHIG00000011008	VARS	100	92.801	Capra_hircus
ENSCGRG00001005686	Vars	100	93.592	ENSTSYG00000001567	VARS	100	93.592	Carlito_syrichta
ENSCGRG00001005686	Vars	91	90.052	ENSCAPG00000013736	VARS	99	90.052	Cavia_aperea
ENSCGRG00001005686	Vars	100	91.060	ENSCPOG00000000870	VARS	100	91.060	Cavia_porcellus
ENSCGRG00001005686	Vars	100	92.801	ENSCCAG00000035656	VARS	100	93.284	Cebus_capucinus
ENSCGRG00001005686	Vars	100	92.801	ENSCATG00000022394	VARS	100	92.801	Cercocebus_atys
ENSCGRG00001005686	Vars	93	86.307	ENSCLAG00000009470	VARS	96	86.307	Chinchilla_lanigera
ENSCGRG00001005686	Vars	100	93.196	ENSCSAG00000008784	VARS	100	93.196	Chlorocebus_sabaeus
ENSCGRG00001005686	Vars	77	74.230	ENSCPBG00000007943	VARS	96	74.230	Chrysemys_picta_bellii
ENSCGRG00001005686	Vars	100	93.196	ENSCANG00000033570	VARS	100	93.196	Colobus_angolensis_palliatus
ENSCGRG00001005686	Vars	92	95.394	ENSCGRG00000013352	Vars	78	95.394	Cricetulus_griseus_crigri
ENSCGRG00001005686	Vars	100	64.585	ENSCSEG00000019652	vars	100	64.427	Cynoglossus_semilaevis
ENSCGRG00001005686	Vars	100	65.268	ENSCVAG00000022398	vars	100	65.190	Cyprinodon_variegatus
ENSCGRG00001005686	Vars	100	64.961	ENSDARG00000044575	vars	100	64.852	Danio_rerio
ENSCGRG00001005686	Vars	84	92.568	ENSDORG00000016433	Vars	95	92.568	Dipodomys_ordii
ENSCGRG00001005686	Vars	69	86.799	ENSETEG00000003824	VARS	77	86.799	Echinops_telfairi
ENSCGRG00001005686	Vars	50	71.739	ENSEBUG00000007086	vars	84	70.681	Eptatretus_burgeri
ENSCGRG00001005686	Vars	58	61.737	ENSEBUG00000004637	vars	100	62.912	Eptatretus_burgeri
ENSCGRG00001005686	Vars	100	93.592	ENSEASG00005015673	VARS	100	93.592	Equus_asinus_asinus
ENSCGRG00001005686	Vars	100	92.806	ENSECAG00000014620	VARS	100	93.123	Equus_caballus
ENSCGRG00001005686	Vars	78	90.657	ENSEEUG00000004116	VARS	80	90.657	Erinaceus_europaeus
ENSCGRG00001005686	Vars	100	64.456	ENSELUG00000006550	vars	97	64.379	Esox_lucius
ENSCGRG00001005686	Vars	100	92.563	ENSFCAG00000004510	VARS	100	92.563	Felis_catus
ENSCGRG00001005686	Vars	85	89.163	ENSFDAG00000011401	VARS	100	89.163	Fukomys_damarensis
ENSCGRG00001005686	Vars	100	65.579	ENSFHEG00000010672	vars	100	65.501	Fundulus_heteroclitus
ENSCGRG00001005686	Vars	93	65.757	ENSGMOG00000014908	vars	97	66.500	Gadus_morhua
ENSCGRG00001005686	Vars	100	65.447	ENSGAFG00000021630	vars	100	65.370	Gambusia_affinis
ENSCGRG00001005686	Vars	93	65.755	ENSGACG00000009601	vars	98	66.000	Gasterosteus_aculeatus
ENSCGRG00001005686	Vars	50	64.771	ENSGAGG00000006508	-	91	64.139	Gopherus_agassizii
ENSCGRG00001005686	Vars	100	93.117	ENSGGOG00000011364	VARS	100	93.117	Gorilla_gorilla
ENSCGRG00001005686	Vars	100	64.341	ENSHBUG00000017151	vars	97	64.025	Haplochromis_burtoni
ENSCGRG00001005686	Vars	100	90.585	ENSHGLG00000011646	VARS	100	89.953	Heterocephalus_glaber_female
ENSCGRG00001005686	Vars	93	82.641	ENSHGLG00100018062	VARS	100	82.641	Heterocephalus_glaber_male
ENSCGRG00001005686	Vars	99	64.341	ENSHCOG00000012198	vars	99	64.458	Hippocampus_comes
ENSCGRG00001005686	Vars	100	65.214	ENSIPUG00000005218	vars	100	65.214	Ictalurus_punctatus
ENSCGRG00001005686	Vars	100	93.834	ENSSTOG00000013112	VARS	100	93.834	Ictidomys_tridecemlineatus
ENSCGRG00001005686	Vars	100	91.851	ENSJJAG00000019749	-	100	91.139	Jaculus_jaculus
ENSCGRG00001005686	Vars	100	72.547	ENSJJAG00000015343	-	99	73.414	Jaculus_jaculus
ENSCGRG00001005686	Vars	100	65.245	ENSKMAG00000009455	vars	100	64.929	Kryptolebias_marmoratus
ENSCGRG00001005686	Vars	100	65.008	ENSLBEG00000010341	vars	100	64.771	Labrus_bergylta
ENSCGRG00001005686	Vars	94	62.613	ENSLACG00000015232	VARS	99	63.024	Latimeria_chalumnae
ENSCGRG00001005686	Vars	100	66.901	ENSLOCG00000004240	vars	100	66.745	Lepisosteus_oculatus
ENSCGRG00001005686	Vars	100	91.614	ENSLAFG00000023090	VARS	100	91.139	Loxodonta_africana
ENSCGRG00001005686	Vars	100	93.196	ENSMFAG00000001032	VARS	100	93.196	Macaca_fascicularis
ENSCGRG00001005686	Vars	100	93.196	ENSMMUG00000006828	VARS	100	93.196	Macaca_mulatta
ENSCGRG00001005686	Vars	100	93.196	ENSMNEG00000042072	VARS	100	93.196	Macaca_nemestrina
ENSCGRG00001005686	Vars	100	92.959	ENSMLEG00000039307	VARS	100	92.959	Mandrillus_leucophaeus
ENSCGRG00001005686	Vars	100	64.724	ENSMAMG00000003949	vars	100	64.567	Mastacembelus_armatus
ENSCGRG00001005686	Vars	100	64.341	ENSMZEG00005018327	vars	100	63.773	Maylandia_zebra
ENSCGRG00001005686	Vars	100	96.835	ENSMAUG00000006715	Vars	100	96.835	Mesocricetus_auratus
ENSCGRG00001005686	Vars	100	92.168	ENSMICG00000003548	VARS	100	93.035	Microcebus_murinus
ENSCGRG00001005686	Vars	100	93.196	ENSMOCG00000015404	Vars	100	92.880	Microtus_ochrogaster
ENSCGRG00001005686	Vars	100	64.207	ENSMMOG00000015801	vars	100	64.050	Mola_mola
ENSCGRG00001005686	Vars	100	85.443	ENSMODG00000015204	-	100	85.443	Monodelphis_domestica
ENSCGRG00001005686	Vars	99	64.460	ENSMALG00000022532	vars	99	64.224	Monopterus_albus
ENSCGRG00001005686	Vars	100	95.174	MGP_CAROLIEiJ_G0021491	Vars	100	94.778	Mus_caroli
ENSCGRG00001005686	Vars	100	95.332	ENSMUSG00000007029	Vars	100	94.937	Mus_musculus
ENSCGRG00001005686	Vars	100	94.937	MGP_PahariEiJ_G0020486	Vars	100	94.620	Mus_pahari
ENSCGRG00001005686	Vars	100	95.411	MGP_SPRETEiJ_G0022396	Vars	100	95.016	Mus_spretus
ENSCGRG00001005686	Vars	100	92.959	ENSMPUG00000010821	VARS	100	92.959	Mustela_putorius_furo
ENSCGRG00001005686	Vars	78	92.004	ENSMLUG00000013126	VARS	100	92.409	Myotis_lucifugus
ENSCGRG00001005686	Vars	100	93.513	ENSNGAG00000012151	Vars	100	93.829	Nannospalax_galili
ENSCGRG00001005686	Vars	100	64.109	ENSNBRG00000020520	vars	100	63.792	Neolamprologus_brichardi
ENSCGRG00001005686	Vars	100	92.484	ENSNLEG00000006351	VARS	100	92.484	Nomascus_leucogenys
ENSCGRG00001005686	Vars	100	82.199	ENSMEUG00000011378	VARS	100	82.199	Notamacropus_eugenii
ENSCGRG00001005686	Vars	100	93.513	ENSOPRG00000003607	VARS	100	93.513	Ochotona_princeps
ENSCGRG00001005686	Vars	100	90.981	ENSODEG00000017681	VARS	100	90.427	Octodon_degus
ENSCGRG00001005686	Vars	100	65.051	ENSONIG00000013064	vars	99	67.388	Oreochromis_niloticus
ENSCGRG00001005686	Vars	77	78.835	ENSOANG00000005400	VARS	98	78.121	Ornithorhynchus_anatinus
ENSCGRG00001005686	Vars	100	90.427	ENSOCUG00000022463	VARS	100	90.427	Oryctolagus_cuniculus
ENSCGRG00001005686	Vars	100	64.950	ENSORLG00000013063	vars	100	64.892	Oryzias_latipes
ENSCGRG00001005686	Vars	100	65.504	ENSORLG00020003504	vars	100	65.426	Oryzias_latipes_hni
ENSCGRG00001005686	Vars	100	65.400	ENSORLG00015009001	vars	100	65.322	Oryzias_latipes_hsok
ENSCGRG00001005686	Vars	100	64.815	ENSOMEG00000015016	vars	100	64.738	Oryzias_melastigma
ENSCGRG00001005686	Vars	100	92.405	ENSOGAG00000007515	VARS	100	92.405	Otolemur_garnettii
ENSCGRG00001005686	Vars	100	93.354	ENSPPAG00000034012	VARS	100	93.354	Pan_paniscus
ENSCGRG00001005686	Vars	100	92.722	ENSPPRG00000014855	VARS	100	92.722	Panthera_pardus
ENSCGRG00001005686	Vars	85	93.123	ENSPTIG00000010462	VARS	95	93.132	Panthera_tigris_altaica
ENSCGRG00001005686	Vars	100	93.434	ENSPTRG00000017985	VARS	100	93.434	Pan_troglodytes
ENSCGRG00001005686	Vars	100	91.562	ENSPANG00000014565	VARS	100	91.562	Papio_anubis
ENSCGRG00001005686	Vars	100	63.398	ENSPKIG00000016304	vars	100	63.320	Paramormyrops_kingsleyae
ENSCGRG00001005686	Vars	100	66.194	ENSPMGG00000023909	vars	100	66.036	Periophthalmus_magnuspinnatus
ENSCGRG00001005686	Vars	100	96.915	ENSPEMG00000006639	Vars	100	96.915	Peromyscus_maniculatus_bairdii
ENSCGRG00001005686	Vars	100	85.127	ENSPCIG00000018553	VARS	100	85.127	Phascolarctos_cinereus
ENSCGRG00001005686	Vars	100	65.525	ENSPFOG00000015690	vars	100	65.447	Poecilia_formosa
ENSCGRG00001005686	Vars	100	65.932	ENSPLAG00000009590	vars	100	65.618	Poecilia_latipinna
ENSCGRG00001005686	Vars	100	65.525	ENSPMEG00000004708	vars	100	65.447	Poecilia_mexicana
ENSCGRG00001005686	Vars	100	64.016	ENSPREG00000013264	vars	98	73.006	Poecilia_reticulata
ENSCGRG00001005686	Vars	100	91.456	ENSPPYG00000016460	VARS	100	91.456	Pongo_abelii
ENSCGRG00001005686	Vars	86	90.844	ENSPCAG00000013565	VARS	86	90.844	Procavia_capensis
ENSCGRG00001005686	Vars	100	92.411	ENSPCOG00000010942	VARS	100	92.727	Propithecus_coquereli
ENSCGRG00001005686	Vars	100	89.082	ENSPVAG00000012403	VARS	100	89.082	Pteropus_vampyrus
ENSCGRG00001005686	Vars	100	64.341	ENSPNYG00000022511	vars	100	64.025	Pundamilia_nyererei
ENSCGRG00001005686	Vars	100	65.322	ENSPNAG00000020962	vars	100	65.089	Pygocentrus_nattereri
ENSCGRG00001005686	Vars	100	95.807	ENSRNOG00000000867	Vars	100	95.807	Rattus_norvegicus
ENSCGRG00001005686	Vars	100	93.117	ENSRBIG00000041669	VARS	100	93.117	Rhinopithecus_bieti
ENSCGRG00001005686	Vars	100	93.117	ENSRROG00000045490	VARS	100	93.117	Rhinopithecus_roxellana
ENSCGRG00001005686	Vars	100	92.642	ENSSBOG00000035402	VARS	100	92.642	Saimiri_boliviensis_boliviensis
ENSCGRG00001005686	Vars	100	80.440	ENSSHAG00000006937	VARS	100	80.676	Sarcophilus_harrisii
ENSCGRG00001005686	Vars	100	64.788	ENSSFOG00015014272	vars	100	64.556	Scleropages_formosus
ENSCGRG00001005686	Vars	100	63.622	ENSSMAG00000009596	vars	99	63.305	Scophthalmus_maximus
ENSCGRG00001005686	Vars	100	64.319	ENSSDUG00000014177	vars	100	64.003	Seriola_dumerili
ENSCGRG00001005686	Vars	100	64.241	ENSSLDG00000025316	vars	100	63.926	Seriola_lalandi_dorsalis
ENSCGRG00001005686	Vars	100	65.268	ENSSPAG00000017068	vars	100	65.031	Stegastes_partitus
ENSCGRG00001005686	Vars	100	91.542	ENSSSCG00000038950	VARS	100	91.858	Sus_scrofa
ENSCGRG00001005686	Vars	82	64.238	ENSTRUG00000012307	vars	98	64.279	Takifugu_rubripes
ENSCGRG00001005686	Vars	100	65.051	ENSTNIG00000008011	vars	100	64.812	Tetraodon_nigroviridis
ENSCGRG00001005686	Vars	54	96.629	ENSTBEG00000004728	-	60	96.629	Tupaia_belangeri
ENSCGRG00001005686	Vars	100	84.335	ENSTTRG00000014128	VARS	100	84.335	Tursiops_truncatus
ENSCGRG00001005686	Vars	100	89.230	ENSUAMG00000010424	VARS	100	89.230	Ursus_americanus
ENSCGRG00001005686	Vars	93	91.746	ENSUMAG00000013486	VARS	98	91.270	Ursus_maritimus
ENSCGRG00001005686	Vars	100	92.016	ENSVVUG00000021323	VARS	100	91.779	Vulpes_vulpes
ENSCGRG00001005686	Vars	96	63.086	ENSXETG00000024076	vars	98	62.379	Xenopus_tropicalis
ENSCGRG00001005686	Vars	100	65.433	ENSXCOG00000019172	vars	100	65.354	Xiphophorus_couchianus
ENSCGRG00001005686	Vars	100	65.292	ENSXMAG00000010927	vars	100	65.214	Xiphophorus_maculatus