EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00001006197 (Gene tree)
Gene ID: -
Gene Symbol: Polr1e
Alias: 53kDa|D030019D19Rik|Paf53|Praf1
Full Name: RNA polymerase I subunit E
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 11753 bases
Position: chrscaffold_2:99597815-99609567
Accession: 100751282
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001004816	RNA_pol_I_A49	PF06870.12	1.8e-104	1	1
ENSCGRP00001004824	RNA_pol_I_A49	PF06870.12	1.3e-99	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001007308	-	1419	-	ENSCGRP00001004824	472 (aa)	-	-
ENSCGRT00001007294	-	1752	XM_003504795	ENSCGRP00001004816	434 (aa)	XP_003504843	UPI0004543F7C

Gene Model

Click here to download ENSCGRG00001006197's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001006197's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001006197	Polr1e	96	78.947	ENSG00000137054	POLR1E	99	78.947	Homo_sapiens
ENSCGRG00001006197	Polr1e	76	61.176	ENSAPOG00000012452	polr1e	94	61.176	Acanthochromis_polyacanthus
ENSCGRG00001006197	Polr1e	100	73.706	ENSAMEG00000010193	POLR1E	100	73.706	Ailuropoda_melanoleuca
ENSCGRG00001006197	Polr1e	91	42.857	ENSACIG00000009884	polr1e	99	42.785	Amphilophus_citrinellus
ENSCGRG00001006197	Polr1e	95	43.855	ENSAOCG00000005665	polr1e	99	43.855	Amphiprion_ocellaris
ENSCGRG00001006197	Polr1e	95	43.614	ENSAPEG00000020581	polr1e	99	43.614	Amphiprion_percula
ENSCGRG00001006197	Polr1e	95	44.819	ENSATEG00000020609	polr1e	99	44.819	Anabas_testudineus
ENSCGRG00001006197	Polr1e	79	56.955	ENSAPLG00000010340	POLR1E	100	56.955	Anas_platyrhynchos
ENSCGRG00001006197	Polr1e	96	79.665	ENSANAG00000038046	POLR1E	99	79.665	Aotus_nancymaae
ENSCGRG00001006197	Polr1e	97	42.891	ENSACLG00000013685	polr1e	100	42.891	Astatotilapia_calliptera
ENSCGRG00001006197	Polr1e	94	41.889	ENSAMXG00000018181	polr1e	98	41.889	Astyanax_mexicanus
ENSCGRG00001006197	Polr1e	96	83.254	ENSBTAG00000012243	POLR1E	99	83.254	Bos_taurus
ENSCGRG00001006197	Polr1e	91	74.112	ENSCJAG00000010512	POLR1E	93	78.342	Callithrix_jacchus
ENSCGRG00001006197	Polr1e	96	82.057	ENSCAFG00000002377	POLR1E	99	82.057	Canis_familiaris
ENSCGRG00001006197	Polr1e	96	82.297	ENSCAFG00020017851	POLR1E	99	82.297	Canis_lupus_dingo
ENSCGRG00001006197	Polr1e	96	81.100	ENSCHIG00000019479	POLR1E	99	81.100	Capra_hircus
ENSCGRG00001006197	Polr1e	96	80.144	ENSTSYG00000002075	POLR1E	99	80.144	Carlito_syrichta
ENSCGRG00001006197	Polr1e	66	84.375	ENSCAPG00000015653	POLR1E	99	84.375	Cavia_aperea
ENSCGRG00001006197	Polr1e	96	84.211	ENSCPOG00000009965	POLR1E	100	84.211	Cavia_porcellus
ENSCGRG00001006197	Polr1e	96	72.249	ENSCCAG00000029460	POLR1E	99	77.888	Cebus_capucinus
ENSCGRG00001006197	Polr1e	96	79.426	ENSCATG00000031732	POLR1E	99	84.211	Cercocebus_atys
ENSCGRG00001006197	Polr1e	86	83.646	ENSCLAG00000012701	POLR1E	98	83.646	Chinchilla_lanigera
ENSCGRG00001006197	Polr1e	96	78.947	ENSCSAG00000010782	POLR1E	99	78.947	Chlorocebus_sabaeus
ENSCGRG00001006197	Polr1e	91	71.827	ENSCHOG00000013024	POLR1E	83	71.827	Choloepus_hoffmanni
ENSCGRG00001006197	Polr1e	95	66.180	ENSCPBG00000006923	POLR1E	99	66.180	Chrysemys_picta_bellii
ENSCGRG00001006197	Polr1e	96	78.469	ENSCANG00000036112	POLR1E	99	82.609	Colobus_angolensis_palliatus
ENSCGRG00001006197	Polr1e	100	99.576	ENSCGRG00000006430	Polr1e	100	99.576	Cricetulus_griseus_crigri
ENSCGRG00001006197	Polr1e	94	41.748	ENSCSEG00000005121	polr1e	99	41.748	Cynoglossus_semilaevis
ENSCGRG00001006197	Polr1e	95	40.625	ENSCVAG00000019759	polr1e	99	40.482	Cyprinodon_variegatus
ENSCGRG00001006197	Polr1e	91	43.750	ENSDARG00000006434	polr1e	99	43.584	Danio_rerio
ENSCGRG00001006197	Polr1e	97	72.785	ENSDNOG00000010257	POLR1E	99	72.785	Dasypus_novemcinctus
ENSCGRG00001006197	Polr1e	82	76.620	ENSETEG00000018204	POLR1E	99	76.620	Echinops_telfairi
ENSCGRG00001006197	Polr1e	96	81.818	ENSEASG00005000675	POLR1E	99	81.818	Equus_asinus_asinus
ENSCGRG00001006197	Polr1e	96	81.579	ENSECAG00000014669	POLR1E	99	81.579	Equus_caballus
ENSCGRG00001006197	Polr1e	91	70.229	ENSEEUG00000011928	POLR1E	84	70.229	Erinaceus_europaeus
ENSCGRG00001006197	Polr1e	96	43.705	ENSELUG00000008150	polr1e	99	43.705	Esox_lucius
ENSCGRG00001006197	Polr1e	96	80.861	ENSFCAG00000013081	POLR1E	99	80.861	Felis_catus
ENSCGRG00001006197	Polr1e	91	58.629	ENSFALG00000012950	POLR1E	99	58.629	Ficedula_albicollis
ENSCGRG00001006197	Polr1e	96	83.493	ENSFDAG00000016917	POLR1E	100	83.493	Fukomys_damarensis
ENSCGRG00001006197	Polr1e	95	41.727	ENSFHEG00000009801	polr1e	99	41.727	Fundulus_heteroclitus
ENSCGRG00001006197	Polr1e	80	50.476	ENSGMOG00000003336	POLR1E	93	50.476	Gadus_morhua
ENSCGRG00001006197	Polr1e	95	59.466	ENSGALG00000005395	POLR1E	99	59.466	Gallus_gallus
ENSCGRG00001006197	Polr1e	95	41.687	ENSGAFG00000004850	polr1e	99	41.687	Gambusia_affinis
ENSCGRG00001006197	Polr1e	95	40.380	ENSGACG00000016087	polr1e	99	40.380	Gasterosteus_aculeatus
ENSCGRG00001006197	Polr1e	94	58.578	ENSGAGG00000001659	POLR1E	98	70.103	Gopherus_agassizii
ENSCGRG00001006197	Polr1e	96	78.708	ENSGGOG00000001882	POLR1E	99	83.333	Gorilla_gorilla
ENSCGRG00001006197	Polr1e	97	42.891	ENSHBUG00000002559	polr1e	100	42.891	Haplochromis_burtoni
ENSCGRG00001006197	Polr1e	96	83.254	ENSHGLG00000002036	POLR1E	100	83.254	Heterocephalus_glaber_female
ENSCGRG00001006197	Polr1e	96	83.493	ENSHGLG00100012784	POLR1E	100	83.493	Heterocephalus_glaber_male
ENSCGRG00001006197	Polr1e	95	42.651	ENSHCOG00000002774	polr1e	99	42.892	Hippocampus_comes
ENSCGRG00001006197	Polr1e	95	42.686	ENSIPUG00000003019	polr1e	99	42.686	Ictalurus_punctatus
ENSCGRG00001006197	Polr1e	96	81.818	ENSSTOG00000009810	POLR1E	99	81.818	Ictidomys_tridecemlineatus
ENSCGRG00001006197	Polr1e	97	84.487	ENSJJAG00000020731	Polr1e	97	84.487	Jaculus_jaculus
ENSCGRG00001006197	Polr1e	95	40.964	ENSKMAG00000000046	polr1e	99	40.964	Kryptolebias_marmoratus
ENSCGRG00001006197	Polr1e	96	44.869	ENSLBEG00000003104	polr1e	99	44.498	Labrus_bergylta
ENSCGRG00001006197	Polr1e	82	62.604	ENSLACG00000003416	POLR1E	99	62.604	Latimeria_chalumnae
ENSCGRG00001006197	Polr1e	96	49.880	ENSLOCG00000012859	polr1e	99	49.880	Lepisosteus_oculatus
ENSCGRG00001006197	Polr1e	97	81.146	ENSLAFG00000012831	POLR1E	99	81.146	Loxodonta_africana
ENSCGRG00001006197	Polr1e	98	78.588	ENSMFAG00000045465	POLR1E	99	84.211	Macaca_fascicularis
ENSCGRG00001006197	Polr1e	96	79.426	ENSMMUG00000017892	POLR1E	99	84.211	Macaca_mulatta
ENSCGRG00001006197	Polr1e	96	73.131	ENSMNEG00000040283	POLR1E	100	80.531	Macaca_nemestrina
ENSCGRG00001006197	Polr1e	96	79.426	ENSMLEG00000031135	POLR1E	99	84.211	Mandrillus_leucophaeus
ENSCGRG00001006197	Polr1e	96	41.706	ENSMAMG00000001260	polr1e	99	41.706	Mastacembelus_armatus
ENSCGRG00001006197	Polr1e	97	43.128	ENSMZEG00005021536	polr1e	100	43.128	Maylandia_zebra
ENSCGRG00001006197	Polr1e	99	96.305	ENSMAUG00000021044	Polr1e	99	96.305	Mesocricetus_auratus
ENSCGRG00001006197	Polr1e	96	79.904	ENSMICG00000003673	POLR1E	99	79.904	Microcebus_murinus
ENSCGRG00001006197	Polr1e	100	91.935	ENSMOCG00000012920	Polr1e	100	91.935	Microtus_ochrogaster
ENSCGRG00001006197	Polr1e	95	43.645	ENSMMOG00000007391	polr1e	99	43.645	Mola_mola
ENSCGRG00001006197	Polr1e	91	70.455	ENSMODG00000002884	POLR1E	97	70.455	Monodelphis_domestica
ENSCGRG00001006197	Polr1e	97	42.488	ENSMALG00000002665	polr1e	100	42.488	Monopterus_albus
ENSCGRG00001006197	Polr1e	100	86.406	MGP_CAROLIEiJ_G0025967	Polr1e	100	86.406	Mus_caroli
ENSCGRG00001006197	Polr1e	100	87.788	ENSMUSG00000028318	Polr1e	100	87.788	Mus_musculus
ENSCGRG00001006197	Polr1e	99	88.453	MGP_PahariEiJ_G0024114	Polr1e	99	88.453	Mus_pahari
ENSCGRG00001006197	Polr1e	100	87.558	MGP_SPRETEiJ_G0026930	Polr1e	100	87.558	Mus_spretus
ENSCGRG00001006197	Polr1e	97	75.106	ENSMPUG00000006040	POLR1E	99	75.106	Mustela_putorius_furo
ENSCGRG00001006197	Polr1e	98	79.108	ENSMLUG00000012688	POLR1E	98	79.108	Myotis_lucifugus
ENSCGRG00001006197	Polr1e	99	85.219	ENSNGAG00000002520	Polr1e	99	85.219	Nannospalax_galili
ENSCGRG00001006197	Polr1e	95	43.614	ENSNBRG00000016822	polr1e	98	43.614	Neolamprologus_brichardi
ENSCGRG00001006197	Polr1e	96	78.708	ENSNLEG00000003616	POLR1E	99	83.333	Nomascus_leucogenys
ENSCGRG00001006197	Polr1e	70	75.000	ENSMEUG00000015372	-	80	75.000	Notamacropus_eugenii
ENSCGRG00001006197	Polr1e	69	92.000	ENSOPRG00000014206	POLR1E	91	92.000	Ochotona_princeps
ENSCGRG00001006197	Polr1e	99	82.791	ENSODEG00000014565	POLR1E	100	82.791	Octodon_degus
ENSCGRG00001006197	Polr1e	100	42.664	ENSONIG00000008921	polr1e	100	43.602	Oreochromis_niloticus
ENSCGRG00001006197	Polr1e	96	80.144	ENSOCUG00000024773	POLR1E	99	80.144	Oryctolagus_cuniculus
ENSCGRG00001006197	Polr1e	95	42.651	ENSORLG00000005143	polr1e	99	42.651	Oryzias_latipes
ENSCGRG00001006197	Polr1e	89	42.268	ENSORLG00020007271	polr1e	99	42.268	Oryzias_latipes_hni
ENSCGRG00001006197	Polr1e	95	42.651	ENSORLG00015000137	polr1e	99	42.651	Oryzias_latipes_hsok
ENSCGRG00001006197	Polr1e	97	41.176	ENSOMEG00000013264	polr1e	99	41.176	Oryzias_melastigma
ENSCGRG00001006197	Polr1e	98	81.647	ENSOGAG00000012981	POLR1E	99	81.647	Otolemur_garnettii
ENSCGRG00001006197	Polr1e	97	81.146	ENSOARG00000011465	POLR1E	97	81.146	Ovis_aries
ENSCGRG00001006197	Polr1e	96	78.947	ENSPPAG00000034566	POLR1E	99	84.211	Pan_paniscus
ENSCGRG00001006197	Polr1e	96	80.622	ENSPPRG00000005649	POLR1E	99	80.622	Panthera_pardus
ENSCGRG00001006197	Polr1e	96	80.622	ENSPTIG00000009774	POLR1E	99	80.622	Panthera_tigris_altaica
ENSCGRG00001006197	Polr1e	96	78.947	ENSPTRG00000020944	POLR1E	99	84.211	Pan_troglodytes
ENSCGRG00001006197	Polr1e	96	79.426	ENSPANG00000025563	POLR1E	99	84.211	Papio_anubis
ENSCGRG00001006197	Polr1e	95	45.324	ENSPKIG00000003562	polr1e	99	45.324	Paramormyrops_kingsleyae
ENSCGRG00001006197	Polr1e	91	61.500	ENSPSIG00000003274	POLR1E	92	61.500	Pelodiscus_sinensis
ENSCGRG00001006197	Polr1e	91	44.140	ENSPMGG00000024169	polr1e	96	44.140	Periophthalmus_magnuspinnatus
ENSCGRG00001006197	Polr1e	100	93.088	ENSPEMG00000019151	-	100	93.088	Peromyscus_maniculatus_bairdii
ENSCGRG00001006197	Polr1e	100	76.322	ENSPEMG00000022300	-	100	76.322	Peromyscus_maniculatus_bairdii
ENSCGRG00001006197	Polr1e	91	70.707	ENSPCIG00000014798	POLR1E	97	70.707	Phascolarctos_cinereus
ENSCGRG00001006197	Polr1e	96	40.766	ENSPFOG00000019627	polr1e	99	40.766	Poecilia_formosa
ENSCGRG00001006197	Polr1e	95	42.410	ENSPLAG00000022679	polr1e	99	42.410	Poecilia_latipinna
ENSCGRG00001006197	Polr1e	82	42.659	ENSPMEG00000022123	polr1e	93	42.659	Poecilia_mexicana
ENSCGRG00001006197	Polr1e	95	41.928	ENSPREG00000009470	polr1e	99	41.928	Poecilia_reticulata
ENSCGRG00001006197	Polr1e	96	78.469	ENSPPYG00000019061	POLR1E	99	78.469	Pongo_abelii
ENSCGRG00001006197	Polr1e	70	65.789	ENSPCAG00000004891	POLR1E	100	65.789	Procavia_capensis
ENSCGRG00001006197	Polr1e	96	80.383	ENSPCOG00000027448	POLR1E	99	80.383	Propithecus_coquereli
ENSCGRG00001006197	Polr1e	91	83.969	ENSPVAG00000007940	POLR1E	83	83.969	Pteropus_vampyrus
ENSCGRG00001006197	Polr1e	97	43.128	ENSPNYG00000001032	polr1e	100	43.128	Pundamilia_nyererei
ENSCGRG00001006197	Polr1e	91	41.814	ENSPNAG00000006987	polr1e	95	41.814	Pygocentrus_nattereri
ENSCGRG00001006197	Polr1e	100	89.401	ENSRNOG00000012664	Polr1e	100	89.401	Rattus_norvegicus
ENSCGRG00001006197	Polr1e	93	78.465	ENSRBIG00000034214	POLR1E	99	79.474	Rhinopithecus_bieti
ENSCGRG00001006197	Polr1e	96	78.947	ENSRROG00000031986	POLR1E	99	84.211	Rhinopithecus_roxellana
ENSCGRG00001006197	Polr1e	94	79.756	ENSSBOG00000021415	POLR1E	98	79.756	Saimiri_boliviensis_boliviensis
ENSCGRG00001006197	Polr1e	83	68.889	ENSSHAG00000016084	POLR1E	100	68.889	Sarcophilus_harrisii
ENSCGRG00001006197	Polr1e	94	45.122	ENSSFOG00015002293	polr1e	98	45.122	Scleropages_formosus
ENSCGRG00001006197	Polr1e	97	46.099	ENSSMAG00000011672	polr1e	94	46.099	Scophthalmus_maximus
ENSCGRG00001006197	Polr1e	97	43.602	ENSSDUG00000022279	polr1e	100	43.602	Seriola_dumerili
ENSCGRG00001006197	Polr1e	97	43.128	ENSSLDG00000024918	polr1e	100	43.128	Seriola_lalandi_dorsalis
ENSCGRG00001006197	Polr1e	62	71.429	ENSSARG00000009810	-	67	71.429	Sorex_araneus
ENSCGRG00001006197	Polr1e	95	64.891	ENSSPUG00000009499	POLR1E	99	64.891	Sphenodon_punctatus
ENSCGRG00001006197	Polr1e	95	43.855	ENSSPAG00000021240	polr1e	99	43.855	Stegastes_partitus
ENSCGRG00001006197	Polr1e	97	82.578	ENSSSCG00000005347	POLR1E	100	82.578	Sus_scrofa
ENSCGRG00001006197	Polr1e	92	51.121	ENSTGUG00000007169	POLR1E	100	51.121	Taeniopygia_guttata
ENSCGRG00001006197	Polr1e	95	41.827	ENSTRUG00000020779	polr1e	99	42.257	Takifugu_rubripes
ENSCGRG00001006197	Polr1e	95	42.482	ENSTNIG00000017812	polr1e	99	42.410	Tetraodon_nigroviridis
ENSCGRG00001006197	Polr1e	99	78.060	ENSTBEG00000013786	POLR1E	90	78.060	Tupaia_belangeri
ENSCGRG00001006197	Polr1e	91	82.323	ENSTTRG00000008294	POLR1E	84	82.323	Tursiops_truncatus
ENSCGRG00001006197	Polr1e	96	82.297	ENSUAMG00000012474	POLR1E	100	83.379	Ursus_americanus
ENSCGRG00001006197	Polr1e	96	82.297	ENSUMAG00000011496	POLR1E	99	82.297	Ursus_maritimus
ENSCGRG00001006197	Polr1e	79	78.299	ENSVPAG00000009048	POLR1E	81	78.299	Vicugna_pacos
ENSCGRG00001006197	Polr1e	96	82.057	ENSVVUG00000019954	POLR1E	99	82.057	Vulpes_vulpes
ENSCGRG00001006197	Polr1e	94	49.395	ENSXETG00000006533	polr1e	99	49.395	Xenopus_tropicalis
ENSCGRG00001006197	Polr1e	95	41.928	ENSXCOG00000013706	polr1e	99	41.928	Xiphophorus_couchianus
ENSCGRG00001006197	Polr1e	95	43.301	ENSXMAG00000012484	polr1e	99	43.301	Xiphophorus_maculatus