EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001006245 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 857 bases
Position: chrscaffold_26:28900461-28901317
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001004846	Ribosomal_S5_C	PF03719.15	3.7e-26	1	1
ENSCGRP00001004846	Ribosomal_S5	PF00333.20	4.1e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001007343	-	780	-	ENSCGRP00001004846	259 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001006245's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001006245's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001006245	-	89	78.333	ENSCGRG00001015594	-	100	76.471
ENSCGRG00001006245	-	89	92.887	ENSCGRG00001012656	-	93	92.887
ENSCGRG00001006245	-	86	64.414	ENSCGRG00001013970	-	93	64.414
ENSCGRG00001006245	-	100	86.348	ENSCGRG00001023670	Rps2	100	86.348
ENSCGRG00001006245	-	89	78.970	ENSCGRG00001022768	-	100	73.529
ENSCGRG00001006245	-	89	92.500	ENSCGRG00001009609	-	100	92.500
ENSCGRG00001006245	-	92	88.259	ENSCGRG00001024060	-	91	89.167
ENSCGRG00001006245	-	89	85.417	ENSCGRG00001013307	-	93	85.417

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001006245	-	92	65.182	ENSAMEG00000004788	-	88	66.250	Ailuropoda_melanoleuca
ENSCGRG00001006245	-	84	51.835	ENSAMEG00000009620	-	100	51.835	Ailuropoda_melanoleuca
ENSCGRG00001006245	-	95	56.554	ENSANAG00000031734	-	96	55.212	Aotus_nancymaae
ENSCGRG00001006245	-	89	82.500	ENSANAG00000011194	-	89	82.500	Aotus_nancymaae
ENSCGRG00001006245	-	69	77.128	ENSANAG00000029384	-	95	77.128	Aotus_nancymaae
ENSCGRG00001006245	-	94	59.016	ENSANAG00000024142	-	94	65.368	Aotus_nancymaae
ENSCGRG00001006245	-	100	78.067	ENSANAG00000032222	-	88	80.417	Aotus_nancymaae
ENSCGRG00001006245	-	92	80.645	ENSANAG00000037095	-	89	82.553	Aotus_nancymaae
ENSCGRG00001006245	-	100	58.099	ENSCJAG00000000635	-	76	64.069	Callithrix_jacchus
ENSCGRG00001006245	-	89	75.325	ENSCJAG00000035386	-	78	75.325	Callithrix_jacchus
ENSCGRG00001006245	-	90	87.083	ENSCAFG00000017509	-	90	87.029	Canis_familiaris
ENSCGRG00001006245	-	96	76.245	ENSCHIG00000011477	-	100	77.174	Capra_hircus
ENSCGRG00001006245	-	82	81.481	ENSTSYG00000029261	-	87	81.481	Carlito_syrichta
ENSCGRG00001006245	-	90	81.405	ENSTSYG00000027421	-	92	81.250	Carlito_syrichta
ENSCGRG00001006245	-	83	64.486	ENSTSYG00000034130	-	76	64.055	Carlito_syrichta
ENSCGRG00001006245	-	100	80.970	ENSTSYG00000033139	-	95	85.833	Carlito_syrichta
ENSCGRG00001006245	-	90	78.926	ENSTSYG00000031079	-	97	78.750	Carlito_syrichta
ENSCGRG00001006245	-	86	65.929	ENSCPOG00000026421	-	100	66.079	Cavia_porcellus
ENSCGRG00001006245	-	93	77.510	ENSCCAG00000020850	-	84	78.333	Cebus_capucinus
ENSCGRG00001006245	-	93	73.307	ENSCCAG00000028120	-	94	74.167	Cebus_capucinus
ENSCGRG00001006245	-	89	68.398	ENSCCAG00000030295	-	79	68.398	Cebus_capucinus
ENSCGRG00001006245	-	90	64.807	ENSCATG00000032289	-	76	64.502	Cercocebus_atys
ENSCGRG00001006245	-	93	70.769	ENSCATG00000031773	-	91	74.167	Cercocebus_atys
ENSCGRG00001006245	-	100	68.284	ENSCATG00000036372	-	91	71.250	Cercocebus_atys
ENSCGRG00001006245	-	90	77.178	ENSCLAG00000014879	-	99	77.406	Chinchilla_lanigera
ENSCGRG00001006245	-	100	76.866	ENSCLAG00000005355	-	88	79.583	Chinchilla_lanigera
ENSCGRG00001006245	-	89	61.765	ENSCLAG00000000810	-	76	61.765	Chinchilla_lanigera
ENSCGRG00001006245	-	89	64.348	ENSCLAG00000011924	-	80	64.348	Chinchilla_lanigera
ENSCGRG00001006245	-	100	70.076	ENSCLAG00000008450	-	91	73.729	Chinchilla_lanigera
ENSCGRG00001006245	-	86	92.704	ENSCANG00000040571	-	100	92.704	Colobus_angolensis_palliatus
ENSCGRG00001006245	-	97	61.397	ENSCANG00000040877	-	79	66.667	Colobus_angolensis_palliatus
ENSCGRG00001006245	-	100	46.479	ENSCANG00000031673	-	79	69.697	Colobus_angolensis_palliatus
ENSCGRG00001006245	-	89	85.714	ENSCGRG00000009196	-	84	85.714	Cricetulus_griseus_crigri
ENSCGRG00001006245	-	86	64.414	ENSCGRG00000006603	-	93	64.414	Cricetulus_griseus_crigri
ENSCGRG00001006245	-	90	82.553	ENSCGRG00000002188	-	85	82.403	Cricetulus_griseus_crigri
ENSCGRG00001006245	-	97	64.122	ENSDNOG00000010490	-	92	71.939	Dasypus_novemcinctus
ENSCGRG00001006245	-	66	66.477	ENSDNOG00000038786	-	83	66.477	Dasypus_novemcinctus
ENSCGRG00001006245	-	63	67.836	ENSDNOG00000045256	-	79	67.836	Dasypus_novemcinctus
ENSCGRG00001006245	-	88	75.109	ENSDORG00000023277	-	93	69.697	Dipodomys_ordii
ENSCGRG00001006245	-	90	64.876	ENSDORG00000030221	-	90	64.583	Dipodomys_ordii
ENSCGRG00001006245	-	86	73.451	ENSDORG00000024425	-	87	73.451	Dipodomys_ordii
ENSCGRG00001006245	-	86	72.052	ENSDORG00000025335	-	92	72.052	Dipodomys_ordii
ENSCGRG00001006245	-	93	68.750	ENSDORG00000024657	-	92	70.000	Dipodomys_ordii
ENSCGRG00001006245	-	99	58.571	ENSETEG00000008215	-	85	63.750	Echinops_telfairi
ENSCGRG00001006245	-	81	72.038	ENSEASG00005014316	-	64	72.038	Equus_asinus_asinus
ENSCGRG00001006245	-	78	54.726	ENSEEUG00000013311	-	96	55.102	Erinaceus_europaeus
ENSCGRG00001006245	-	93	45.267	ENSFCAG00000032362	-	80	45.455	Felis_catus
ENSCGRG00001006245	-	90	81.481	ENSFDAG00000003864	-	91	81.667	Fukomys_damarensis
ENSCGRG00001006245	-	100	61.154	ENSHGLG00000007017	-	88	62.069	Heterocephalus_glaber_female
ENSCGRG00001006245	-	81	62.085	ENSHGLG00000007652	-	99	62.085	Heterocephalus_glaber_female
ENSCGRG00001006245	-	81	62.085	ENSHGLG00100005590	-	99	62.085	Heterocephalus_glaber_male
ENSCGRG00001006245	-	82	85.973	ENSHGLG00100021251	-	100	85.973	Heterocephalus_glaber_male
ENSCGRG00001006245	-	100	61.154	ENSHGLG00100002247	-	88	62.069	Heterocephalus_glaber_male
ENSCGRG00001006245	-	93	73.859	ENSJJAG00000021348	-	95	74.459	Jaculus_jaculus
ENSCGRG00001006245	-	73	77.778	ENSJJAG00000009920	-	73	77.778	Jaculus_jaculus
ENSCGRG00001006245	-	89	63.485	ENSLAFG00000025960	-	100	63.485	Loxodonta_africana
ENSCGRG00001006245	-	100	47.810	ENSLAFG00000032675	-	81	51.082	Loxodonta_africana
ENSCGRG00001006245	-	67	67.033	ENSLAFG00000025689	-	78	68.927	Loxodonta_africana
ENSCGRG00001006245	-	98	69.847	ENSMFAG00000036581	-	90	71.667	Macaca_fascicularis
ENSCGRG00001006245	-	100	69.884	ENSMFAG00000040549	-	88	72.727	Macaca_fascicularis
ENSCGRG00001006245	-	89	64.935	ENSMFAG00000033104	-	76	64.935	Macaca_fascicularis
ENSCGRG00001006245	-	86	55.804	ENSMFAG00000038684	-	76	55.804	Macaca_fascicularis
ENSCGRG00001006245	-	90	72.222	ENSMMUG00000048399	-	88	71.861	Macaca_mulatta
ENSCGRG00001006245	-	89	71.429	ENSMMUG00000015519	-	78	71.429	Macaca_mulatta
ENSCGRG00001006245	-	89	71.861	ENSMMUG00000000619	-	77	71.861	Macaca_mulatta
ENSCGRG00001006245	-	89	64.502	ENSMNEG00000042646	-	76	64.502	Macaca_nemestrina
ENSCGRG00001006245	-	100	69.030	ENSMNEG00000014551	-	90	71.250	Macaca_nemestrina
ENSCGRG00001006245	-	94	76.680	ENSMNEG00000032346	-	81	77.917	Macaca_nemestrina
ENSCGRG00001006245	-	89	68.511	ENSMNEG00000031742	-	81	68.776	Macaca_nemestrina
ENSCGRG00001006245	-	90	58.798	ENSMNEG00000003341	-	86	58.442	Macaca_nemestrina
ENSCGRG00001006245	-	100	67.910	ENSMLEG00000032385	-	91	70.833	Mandrillus_leucophaeus
ENSCGRG00001006245	-	97	76.834	ENSMLEG00000029661	-	88	80.952	Mandrillus_leucophaeus
ENSCGRG00001006245	-	90	76.033	ENSMLEG00000043748	-	93	75.833	Mandrillus_leucophaeus
ENSCGRG00001006245	-	100	83.969	ENSMLEG00000041622	-	88	87.879	Mandrillus_leucophaeus
ENSCGRG00001006245	-	90	85.062	ENSMLEG00000037553	-	93	85.417	Mandrillus_leucophaeus
ENSCGRG00001006245	-	92	76.613	ENSMAUG00000006005	-	94	76.667	Mesocricetus_auratus
ENSCGRG00001006245	-	69	76.190	ENSMAUG00000000957	-	100	68.519	Mesocricetus_auratus
ENSCGRG00001006245	-	89	87.500	ENSMAUG00000010957	-	92	87.500	Mesocricetus_auratus
ENSCGRG00001006245	-	89	77.083	ENSMICG00000028319	-	90	77.083	Microcebus_murinus
ENSCGRG00001006245	-	89	71.552	ENSMOCG00000010657	-	78	71.552	Microtus_ochrogaster
ENSCGRG00001006245	-	89	69.264	ENSMOCG00000000227	-	67	86.458	Microtus_ochrogaster
ENSCGRG00001006245	-	89	60.173	ENSMOCG00000010673	-	88	60.173	Microtus_ochrogaster
ENSCGRG00001006245	-	79	57.746	ENSMPUG00000004669	-	95	57.746	Mustela_putorius_furo
ENSCGRG00001006245	-	85	62.609	ENSMPUG00000000576	-	89	62.609	Mustela_putorius_furo
ENSCGRG00001006245	-	89	57.500	ENSMPUG00000015799	-	91	57.322	Mustela_putorius_furo
ENSCGRG00001006245	-	85	64.807	ENSMPUG00000015629	-	92	64.783	Mustela_putorius_furo
ENSCGRG00001006245	-	100	64.794	ENSMLUG00000030388	-	92	69.038	Myotis_lucifugus
ENSCGRG00001006245	-	89	69.456	ENSMLUG00000029122	-	100	69.456	Myotis_lucifugus
ENSCGRG00001006245	-	88	80.335	ENSMLUG00000025746	-	100	80.335	Myotis_lucifugus
ENSCGRG00001006245	-	82	63.594	ENSMLUG00000022940	-	99	63.594	Myotis_lucifugus
ENSCGRG00001006245	-	82	68.018	ENSNGAG00000013032	-	100	68.018	Nannospalax_galili
ENSCGRG00001006245	-	93	75.697	ENSNGAG00000009664	-	84	76.250	Nannospalax_galili
ENSCGRG00001006245	-	100	70.896	ENSNLEG00000033986	-	90	70.833	Nomascus_leucogenys
ENSCGRG00001006245	-	90	91.880	ENSNLEG00000029205	-	90	91.775	Nomascus_leucogenys
ENSCGRG00001006245	-	90	91.736	ENSNLEG00000032733	-	96	91.667	Nomascus_leucogenys
ENSCGRG00001006245	-	89	77.056	ENSNLEG00000031715	-	93	71.861	Nomascus_leucogenys
ENSCGRG00001006245	-	98	67.681	ENSNLEG00000034998	-	100	56.383	Nomascus_leucogenys
ENSCGRG00001006245	-	89	71.008	ENSNLEG00000031959	-	89	71.008	Nomascus_leucogenys
ENSCGRG00001006245	-	87	68.966	ENSODEG00000003328	-	78	68.996	Octodon_degus
ENSCGRG00001006245	-	89	68.398	ENSODEG00000013571	-	80	68.398	Octodon_degus
ENSCGRG00001006245	-	89	69.264	ENSODEG00000005578	-	77	69.264	Octodon_degus
ENSCGRG00001006245	-	88	89.451	ENSOCUG00000009140	-	93	89.451	Oryctolagus_cuniculus
ENSCGRG00001006245	-	88	61.472	ENSOCUG00000026818	-	100	61.472	Oryctolagus_cuniculus
ENSCGRG00001006245	-	91	77.143	ENSOCUG00000012731	-	88	77.500	Oryctolagus_cuniculus
ENSCGRG00001006245	-	88	76.371	ENSOCUG00000026627	-	91	76.250	Oryctolagus_cuniculus
ENSCGRG00001006245	-	97	62.934	ENSOGAG00000024844	-	85	64.583	Otolemur_garnettii
ENSCGRG00001006245	-	95	61.417	ENSOARG00000016075	-	90	63.445	Ovis_aries
ENSCGRG00001006245	-	100	61.567	ENSOARG00000007975	-	89	61.088	Ovis_aries
ENSCGRG00001006245	-	97	66.400	ENSPPAG00000029238	-	91	66.250	Pan_paniscus
ENSCGRG00001006245	-	90	84.774	ENSPPAG00000023840	-	95	85.000	Pan_paniscus
ENSCGRG00001006245	-	86	71.622	ENSPPAG00000040669	-	66	86.957	Pan_paniscus
ENSCGRG00001006245	-	89	76.190	ENSPPAG00000039385	-	79	76.190	Pan_paniscus
ENSCGRG00001006245	-	90	75.833	ENSPPAG00000009718	-	87	75.630	Pan_paniscus
ENSCGRG00001006245	-	98	58.984	ENSPTIG00000016889	-	68	80.000	Panthera_tigris_altaica
ENSCGRG00001006245	-	89	66.234	ENSPTRG00000052447	-	80	66.234	Pan_troglodytes
ENSCGRG00001006245	-	89	70.563	ENSPTRG00000045200	-	77	70.563	Pan_troglodytes
ENSCGRG00001006245	-	90	75.833	ENSPTRG00000047742	-	87	75.630	Pan_troglodytes
ENSCGRG00001006245	-	100	80.970	ENSPTRG00000051295	-	95	85.833	Pan_troglodytes
ENSCGRG00001006245	-	89	64.069	ENSPANG00000010731	-	76	64.069	Papio_anubis
ENSCGRG00001006245	-	86	91.189	ENSPANG00000005237	-	100	91.189	Papio_anubis
ENSCGRG00001006245	-	89	70.870	ENSPANG00000033494	-	77	70.870	Papio_anubis
ENSCGRG00001006245	-	100	75.746	ENSPANG00000017609	-	94	80.000	Papio_anubis
ENSCGRG00001006245	-	88	69.328	ENSPCIG00000002626	-	92	69.167	Phascolarctos_cinereus
ENSCGRG00001006245	-	89	65.368	ENSPCIG00000028447	-	84	63.636	Phascolarctos_cinereus
ENSCGRG00001006245	-	99	69.065	ENSPCOG00000014063	-	72	77.922	Propithecus_coquereli
ENSCGRG00001006245	-	86	86.266	ENSPCOG00000013912	-	96	86.266	Propithecus_coquereli
ENSCGRG00001006245	-	99	68.750	ENSPCOG00000002064	-	88	71.784	Propithecus_coquereli
ENSCGRG00001006245	-	86	56.054	ENSRNOG00000022450	AABR07063975.1	100	56.054	Rattus_norvegicus
ENSCGRG00001006245	-	89	75.325	ENSRNOG00000030174	AABR07042903.1	82	93.370	Rattus_norvegicus
ENSCGRG00001006245	-	89	67.500	ENSRBIG00000039210	-	87	67.500	Rhinopithecus_bieti
ENSCGRG00001006245	-	89	65.021	ENSRBIG00000038037	-	91	65.021	Rhinopithecus_bieti
ENSCGRG00001006245	-	90	78.601	ENSRBIG00000028707	-	90	79.167	Rhinopithecus_bieti
ENSCGRG00001006245	-	90	71.245	ENSRBIG00000030797	-	86	70.996	Rhinopithecus_bieti
ENSCGRG00001006245	-	88	84.874	ENSRROG00000031151	-	92	84.874	Rhinopithecus_roxellana
ENSCGRG00001006245	-	91	84.490	ENSRROG00000033610	-	85	84.583	Rhinopithecus_roxellana
ENSCGRG00001006245	-	89	71.250	ENSRROG00000039410	-	90	71.250	Rhinopithecus_roxellana
ENSCGRG00001006245	-	95	77.308	ENSSBOG00000010731	-	86	81.545	Saimiri_boliviensis_boliviensis
ENSCGRG00001006245	-	90	62.661	ENSSBOG00000024457	-	81	62.338	Saimiri_boliviensis_boliviensis
ENSCGRG00001006245	-	93	75.833	ENSSBOG00000028226	-	91	78.261	Saimiri_boliviensis_boliviensis
ENSCGRG00001006245	-	94	80.556	ENSSBOG00000020329	-	89	81.667	Saimiri_boliviensis_boliviensis
ENSCGRG00001006245	-	53	91.250	ENSSBOG00000025337	-	71	97.222	Saimiri_boliviensis_boliviensis
ENSCGRG00001006245	-	71	64.674	ENSSSCG00000031475	-	84	64.674	Sus_scrofa
ENSCGRG00001006245	-	85	48.402	ENSSSCG00000033866	-	89	48.402	Sus_scrofa
ENSCGRG00001006245	-	95	69.412	ENSSSCG00000033125	-	84	73.043	Sus_scrofa
ENSCGRG00001006245	-	88	65.546	ENSSSCG00000031982	-	89	65.546	Sus_scrofa
ENSCGRG00001006245	-	61	91.071	ENSTBEG00000006726	-	100	91.071	Tupaia_belangeri
ENSCGRG00001006245	-	89	73.593	ENSVVUG00000015747	-	74	73.593	Vulpes_vulpes