EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001006591 (Gene tree)
Gene ID: -
Gene Symbol: Zkscan3
Alias: 2810435N07Rik|Skz1|Zfp306|Zfp307
Full Name: zinc finger protein with KRAB and SCAN domains 3
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 5791 bases
Position: chrscaffold_6:37800931-37806721
Accession: 100765350
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001005066	zf-C2H2	PF00096.26	3.9e-44	1	7
ENSCGRP00001005066	zf-C2H2	PF00096.26	3.9e-44	2	7
ENSCGRP00001005066	zf-C2H2	PF00096.26	3.9e-44	3	7
ENSCGRP00001005066	zf-C2H2	PF00096.26	3.9e-44	4	7
ENSCGRP00001005066	zf-C2H2	PF00096.26	3.9e-44	5	7
ENSCGRP00001005066	zf-C2H2	PF00096.26	3.9e-44	6	7
ENSCGRP00001005066	zf-C2H2	PF00096.26	3.9e-44	7	7
ENSCGRP00001005066	zf-met	PF12874.7	1.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001007740	-	819	-	ENSCGRP00001005070	273 (aa)	-	-
ENSCGRT00001007733	-	1662	-	ENSCGRP00001005066	553 (aa)	XP_007620841	G3HPX5

Gene Model

Click here to download ENSCGRG00001006591's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001006591's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001006591	Zkscan3	50	42.012	ENSCGRG00001004047	-	72	42.012
ENSCGRG00001006591	Zkscan3	60	45.217	ENSCGRG00001005125	Wt1	67	45.217
ENSCGRG00001006591	Zkscan3	51	41.767	ENSCGRG00001011966	Zfp715	56	41.767
ENSCGRG00001006591	Zkscan3	57	43.836	ENSCGRG00001015432	Gfi1	57	36.364
ENSCGRG00001006591	Zkscan3	61	51.327	ENSCGRG00001020646	Gm3854	68	51.327
ENSCGRG00001006591	Zkscan3	58	47.826	ENSCGRG00001007115	-	100	47.826
ENSCGRG00001006591	Zkscan3	59	50.655	ENSCGRG00001000576	Zfp26	87	50.655
ENSCGRG00001006591	Zkscan3	64	52.402	ENSCGRG00001023858	Zfp560	97	52.402
ENSCGRG00001006591	Zkscan3	61	42.678	ENSCGRG00001024630	-	96	42.678
ENSCGRG00001006591	Zkscan3	59	48.899	ENSCGRG00001007163	-	99	53.741
ENSCGRG00001006591	Zkscan3	58	48.031	ENSCGRG00001012803	-	94	38.272
ENSCGRG00001006591	Zkscan3	95	36.520	ENSCGRG00001018100	Zfp202	99	36.364
ENSCGRG00001006591	Zkscan3	52	45.415	ENSCGRG00001002406	Zfp39	62	45.221
ENSCGRG00001006591	Zkscan3	50	48.295	ENSCGRG00001021088	Zfp354a	73	49.565
ENSCGRG00001006591	Zkscan3	59	55.030	ENSCGRG00001010967	Zfp1	99	55.030
ENSCGRG00001006591	Zkscan3	61	47.619	ENSCGRG00001024303	-	99	47.619
ENSCGRG00001006591	Zkscan3	59	43.902	ENSCGRG00001001639	Zfp882	99	45.339
ENSCGRG00001006591	Zkscan3	50	52.830	ENSCGRG00001001429	Zfp574	64	48.421

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001006591	Zkscan3	100	100.000	ENSCGRG00000001582	Zkscan3	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001006591	Zkscan3	99	79.422	ENSJJAG00000004576	-	99	79.422	Jaculus_jaculus
ENSCGRG00001006591	Zkscan3	100	97.107	ENSMAUG00000009785	Zkscan3	100	97.107	Mesocricetus_auratus
ENSCGRG00001006591	Zkscan3	100	96.383	ENSMOCG00000017860	Zkscan3	100	96.383	Microtus_ochrogaster
ENSCGRG00001006591	Zkscan3	97	56.942	MGP_CAROLIEiJ_G0018274	Zkscan4	99	59.227	Mus_caroli
ENSCGRG00001006591	Zkscan3	100	93.852	ENSMUSG00000021327	Zkscan3	100	93.852	Mus_musculus
ENSCGRG00001006591	Zkscan3	97	60.886	ENSMUSG00000054931	Zkscan4	99	60.886	Mus_musculus
ENSCGRG00001006591	Zkscan3	96	60.111	MGP_PahariEiJ_G0019324	Zkscan4	99	63.265	Mus_pahari
ENSCGRG00001006591	Zkscan3	97	59.519	MGP_SPRETEiJ_G0019129	Zkscan4	99	59.335	Mus_spretus
ENSCGRG00001006591	Zkscan3	96	67.035	ENSPCAG00000000195	ZKSCAN4	99	67.035	Procavia_capensis
ENSCGRG00001006591	Zkscan3	97	70.588	ENSSSCG00000001204	ZKSCAN4	99	70.588	Sus_scrofa
ENSCGRG00001006591	Zkscan3	71	64.899	ENSTTRG00000015632	-	99	64.899	Tursiops_truncatus