EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001006626 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 9592 bases
Position: chrscaffold_29:23325213-23334804
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001005104	Bystin	PF05291.11	2.5e-120	1	1
ENSCGRP00001005101	Bystin	PF05291.11	2.5e-120	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001007792	-	1248	-	ENSCGRP00001005104	415 (aa)	-	-
ENSCGRT00001007788	-	1260	-	ENSCGRP00001005101	419 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001006626's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001006626's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001006626	-	97	80.723	ENSCGRG00001010109	-	98	77.458
ENSCGRG00001006626	-	59	100.000	ENSCGRG00001022668	-	86	100.000
ENSCGRG00001006626	-	68	80.000	ENSCGRG00001007527	-	96	78.523
ENSCGRG00001006626	-	66	87.676	ENSCGRG00001008990	-	91	87.676

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001006626	-	100	84.668	ENSG00000112578	BYSL	100	83.982	Homo_sapiens
ENSCGRG00001006626	-	98	70.433	ENSAPOG00000017917	bysl	95	70.433	Acanthochromis_polyacanthus
ENSCGRG00001006626	-	100	84.439	ENSAMEG00000013033	BYSL	100	83.982	Ailuropoda_melanoleuca
ENSCGRG00001006626	-	71	79.605	ENSACIG00000019537	bysl	99	79.605	Amphilophus_citrinellus
ENSCGRG00001006626	-	98	70.096	ENSAOCG00000001625	bysl	99	67.963	Amphiprion_ocellaris
ENSCGRG00001006626	-	98	70.096	ENSAPEG00000014739	bysl	99	67.963	Amphiprion_percula
ENSCGRG00001006626	-	100	69.336	ENSATEG00000006316	bysl	99	69.336	Anabas_testudineus
ENSCGRG00001006626	-	78	76.347	ENSAPLG00000008733	BYSL	99	76.347	Anas_platyrhynchos
ENSCGRG00001006626	-	100	66.892	ENSACAG00000003079	BYSL	92	67.568	Anolis_carolinensis
ENSCGRG00001006626	-	100	84.897	ENSANAG00000036138	BYSL	100	84.439	Aotus_nancymaae
ENSCGRG00001006626	-	100	68.736	ENSACLG00000022434	bysl	99	68.736	Astatotilapia_calliptera
ENSCGRG00001006626	-	97	68.735	ENSAMXG00000008799	bysl	95	68.258	Astyanax_mexicanus
ENSCGRG00001006626	-	100	84.211	ENSBTAG00000010101	BYSL	100	83.524	Bos_taurus
ENSCGRG00001006626	-	96	48.333	WBGene00000276	byn-1	92	47.857	Caenorhabditis_elegans
ENSCGRG00001006626	-	100	83.982	ENSCJAG00000004266	BYSL	100	83.524	Callithrix_jacchus
ENSCGRG00001006626	-	100	83.066	ENSCAFG00000001614	BYSL	100	82.380	Canis_familiaris
ENSCGRG00001006626	-	100	83.066	ENSCAFG00020008426	BYSL	100	82.380	Canis_lupus_dingo
ENSCGRG00001006626	-	100	84.897	ENSCHIG00000017590	BYSL	73	84.439	Capra_hircus
ENSCGRG00001006626	-	100	84.211	ENSTSYG00000029904	BYSL	100	83.524	Carlito_syrichta
ENSCGRG00001006626	-	69	90.816	ENSCAPG00000015987	BYSL	100	90.816	Cavia_aperea
ENSCGRG00001006626	-	100	85.321	ENSCPOG00000004403	BYSL	100	85.321	Cavia_porcellus
ENSCGRG00001006626	-	100	84.439	ENSCCAG00000036583	BYSL	100	83.982	Cebus_capucinus
ENSCGRG00001006626	-	100	85.126	ENSCATG00000039266	BYSL	100	84.439	Cercocebus_atys
ENSCGRG00001006626	-	100	86.468	ENSCLAG00000014143	BYSL	100	86.468	Chinchilla_lanigera
ENSCGRG00001006626	-	100	85.126	ENSCSAG00000011306	BYSL	100	84.439	Chlorocebus_sabaeus
ENSCGRG00001006626	-	71	89.333	ENSCHOG00000011476	BYSL	72	89.333	Choloepus_hoffmanni
ENSCGRG00001006626	-	99	70.629	ENSCPBG00000017439	BYSL	96	69.697	Chrysemys_picta_bellii
ENSCGRG00001006626	-	98	51.300	ENSCING00000001646	-	87	55.091	Ciona_intestinalis
ENSCGRG00001006626	-	98	50.476	ENSCSAVG00000008659	-	87	54.569	Ciona_savignyi
ENSCGRG00001006626	-	100	84.668	ENSCANG00000031335	BYSL	100	83.982	Colobus_angolensis_palliatus
ENSCGRG00001006626	-	69	71.777	ENSCGRG00000002253	-	100	71.777	Cricetulus_griseus_crigri
ENSCGRG00001006626	-	99	84.455	ENSCGRG00000013448	-	98	84.455	Cricetulus_griseus_crigri
ENSCGRG00001006626	-	99	97.847	ENSCGRG00000016761	-	100	97.847	Cricetulus_griseus_crigri
ENSCGRG00001006626	-	100	82.353	ENSCGRG00000000072	-	100	83.032	Cricetulus_griseus_crigri
ENSCGRG00001006626	-	69	77.181	ENSCGRG00000016274	-	100	77.181	Cricetulus_griseus_crigri
ENSCGRG00001006626	-	100	69.406	ENSCSEG00000002246	bysl	95	69.406	Cynoglossus_semilaevis
ENSCGRG00001006626	-	96	71.149	ENSCVAG00000023275	bysl	95	70.264	Cyprinodon_variegatus
ENSCGRG00001006626	-	99	70.327	ENSDARG00000001057	bysl	90	70.327	Danio_rerio
ENSCGRG00001006626	-	100	84.174	ENSDNOG00000016670	BYSL	100	84.174	Dasypus_novemcinctus
ENSCGRG00001006626	-	100	85.321	ENSDORG00000010968	Bysl	100	85.321	Dipodomys_ordii
ENSCGRG00001006626	-	97	48.792	FBgn0010292	bys	92	48.792	Drosophila_melanogaster
ENSCGRG00001006626	-	87	78.157	ENSETEG00000018226	BYSL	87	78.157	Echinops_telfairi
ENSCGRG00001006626	-	96	62.927	ENSEBUG00000000925	bysl	91	62.745	Eptatretus_burgeri
ENSCGRG00001006626	-	100	84.897	ENSEASG00005003059	BYSL	100	84.439	Equus_asinus_asinus
ENSCGRG00001006626	-	100	85.126	ENSECAG00000021260	BYSL	100	84.668	Equus_caballus
ENSCGRG00001006626	-	97	70.335	ENSELUG00000014214	bysl	92	70.335	Esox_lucius
ENSCGRG00001006626	-	100	85.780	ENSFCAG00000026154	BYSL	100	85.780	Felis_catus
ENSCGRG00001006626	-	69	79.661	ENSFALG00000002897	BYSL	96	79.661	Ficedula_albicollis
ENSCGRG00001006626	-	100	79.358	ENSFDAG00000014804	BYSL	100	79.358	Fukomys_damarensis
ENSCGRG00001006626	-	96	72.195	ENSFHEG00000005147	bysl	94	71.770	Fundulus_heteroclitus
ENSCGRG00001006626	-	99	66.820	ENSGMOG00000008061	bysl	99	65.899	Gadus_morhua
ENSCGRG00001006626	-	100	66.821	ENSGALG00000003467	BYSL	100	66.589	Gallus_gallus
ENSCGRG00001006626	-	95	69.756	ENSGAFG00000021598	bysl	93	69.903	Gambusia_affinis
ENSCGRG00001006626	-	100	66.972	ENSGACG00000001059	bysl	99	66.972	Gasterosteus_aculeatus
ENSCGRG00001006626	-	99	70.163	ENSGAGG00000017774	BYSL	96	69.231	Gopherus_agassizii
ENSCGRG00001006626	-	100	84.668	ENSGGOG00000027046	BYSL	100	83.982	Gorilla_gorilla
ENSCGRG00001006626	-	100	68.736	ENSHBUG00000002896	bysl	99	68.736	Haplochromis_burtoni
ENSCGRG00001006626	-	100	85.092	ENSHGLG00000017479	BYSL	100	85.092	Heterocephalus_glaber_female
ENSCGRG00001006626	-	100	85.092	ENSHGLG00100011829	BYSL	100	85.092	Heterocephalus_glaber_male
ENSCGRG00001006626	-	100	65.596	ENSHCOG00000005390	bysl	99	65.596	Hippocampus_comes
ENSCGRG00001006626	-	99	66.213	ENSIPUG00000017509	BYSL	99	66.059	Ictalurus_punctatus
ENSCGRG00001006626	-	99	87.028	ENSSTOG00000021848	BYSL	99	85.517	Ictidomys_tridecemlineatus
ENSCGRG00001006626	-	100	85.780	ENSJJAG00000023129	-	100	85.321	Jaculus_jaculus
ENSCGRG00001006626	-	71	74.587	ENSJJAG00000003859	-	100	74.587	Jaculus_jaculus
ENSCGRG00001006626	-	98	70.504	ENSKMAG00000021439	bysl	99	68.493	Kryptolebias_marmoratus
ENSCGRG00001006626	-	98	68.483	ENSLOCG00000012661	bysl	94	68.632	Lepisosteus_oculatus
ENSCGRG00001006626	-	90	85.492	ENSLAFG00000015418	BYSL	100	85.676	Loxodonta_africana
ENSCGRG00001006626	-	100	85.126	ENSMFAG00000033214	BYSL	100	84.439	Macaca_fascicularis
ENSCGRG00001006626	-	100	84.897	ENSMMUG00000004416	BYSL	99	84.211	Macaca_mulatta
ENSCGRG00001006626	-	100	85.126	ENSMNEG00000043045	BYSL	100	84.439	Macaca_nemestrina
ENSCGRG00001006626	-	100	85.126	ENSMLEG00000041724	BYSL	100	84.439	Mandrillus_leucophaeus
ENSCGRG00001006626	-	98	69.712	ENSMAMG00000023910	bysl	99	67.661	Mastacembelus_armatus
ENSCGRG00001006626	-	98	70.361	ENSMZEG00005011046	bysl	95	70.361	Maylandia_zebra
ENSCGRG00001006626	-	60	79.231	ENSMGAG00000006299	BYSL	99	79.231	Meleagris_gallopavo
ENSCGRG00001006626	-	65	94.819	ENSMAUG00000010845	Bysl	97	94.819	Mesocricetus_auratus
ENSCGRG00001006626	-	100	84.439	ENSMICG00000011347	BYSL	100	83.982	Microcebus_murinus
ENSCGRG00001006626	-	100	88.532	ENSMOCG00000002210	Bysl	100	88.532	Microtus_ochrogaster
ENSCGRG00001006626	-	71	79.276	ENSMMOG00000021768	bysl	99	79.276	Mola_mola
ENSCGRG00001006626	-	100	75.455	ENSMODG00000012808	BYSL	100	75.227	Monodelphis_domestica
ENSCGRG00001006626	-	100	68.109	ENSMALG00000018147	bysl	99	68.109	Monopterus_albus
ENSCGRG00001006626	-	100	84.633	MGP_CAROLIEiJ_G0021703	Bysl	100	84.633	Mus_caroli
ENSCGRG00001006626	-	100	85.780	ENSMUSG00000023988	Bysl	100	85.780	Mus_musculus
ENSCGRG00001006626	-	100	86.697	MGP_PahariEiJ_G0020693	Bysl	100	86.697	Mus_pahari
ENSCGRG00001006626	-	100	85.550	MGP_SPRETEiJ_G0022615	Bysl	100	85.550	Mus_spretus
ENSCGRG00001006626	-	100	83.753	ENSMPUG00000013486	BYSL	100	83.066	Mustela_putorius_furo
ENSCGRG00001006626	-	100	84.897	ENSMLUG00000014028	BYSL	100	84.211	Myotis_lucifugus
ENSCGRG00001006626	-	68	92.123	ENSNGAG00000005496	Bysl	100	92.123	Nannospalax_galili
ENSCGRG00001006626	-	100	68.736	ENSNBRG00000006639	bysl	99	68.736	Neolamprologus_brichardi
ENSCGRG00001006626	-	100	76.620	ENSNLEG00000032809	BYSL	100	75.926	Nomascus_leucogenys
ENSCGRG00001006626	-	68	84.589	ENSMEUG00000000759	BYSL	99	84.589	Notamacropus_eugenii
ENSCGRG00001006626	-	100	85.584	ENSOPRG00000015845	BYSL	100	84.897	Ochotona_princeps
ENSCGRG00001006626	-	100	83.716	ENSODEG00000016059	BYSL	100	83.716	Octodon_degus
ENSCGRG00001006626	-	100	68.046	ENSONIG00000018932	bysl	99	68.046	Oreochromis_niloticus
ENSCGRG00001006626	-	100	85.355	ENSOCUG00000017567	BYSL	100	84.897	Oryctolagus_cuniculus
ENSCGRG00001006626	-	100	67.816	ENSORLG00000000248	bysl	99	67.816	Oryzias_latipes
ENSCGRG00001006626	-	100	67.586	ENSORLG00020008275	bysl	99	67.586	Oryzias_latipes_hni
ENSCGRG00001006626	-	100	67.816	ENSORLG00015004475	bysl	99	67.816	Oryzias_latipes_hsok
ENSCGRG00001006626	-	98	69.617	ENSOMEG00000015003	bysl	95	69.617	Oryzias_melastigma
ENSCGRG00001006626	-	100	84.897	ENSOGAG00000015234	BYSL	100	84.211	Otolemur_garnettii
ENSCGRG00001006626	-	87	84.946	ENSOARG00000002863	BYSL	99	84.946	Ovis_aries
ENSCGRG00001006626	-	100	84.897	ENSPPAG00000028063	BYSL	100	84.211	Pan_paniscus
ENSCGRG00001006626	-	100	85.780	ENSPPRG00000010500	BYSL	100	85.780	Panthera_pardus
ENSCGRG00001006626	-	100	85.780	ENSPTIG00000010244	BYSL	100	85.780	Panthera_tigris_altaica
ENSCGRG00001006626	-	100	84.897	ENSPTRG00000018163	BYSL	100	84.211	Pan_troglodytes
ENSCGRG00001006626	-	100	84.897	ENSPANG00000007619	BYSL	100	84.211	Papio_anubis
ENSCGRG00001006626	-	96	68.613	ENSPKIG00000001265	bysl	98	67.053	Paramormyrops_kingsleyae
ENSCGRG00001006626	-	98	71.529	ENSPSIG00000009405	BYSL	100	68.315	Pelodiscus_sinensis
ENSCGRG00001006626	-	100	67.130	ENSPMGG00000004006	bysl	99	67.130	Periophthalmus_magnuspinnatus
ENSCGRG00001006626	-	100	89.220	ENSPEMG00000022283	Bysl	100	90.728	Peromyscus_maniculatus_bairdii
ENSCGRG00001006626	-	76	72.424	ENSPMAG00000000953	bysl	96	71.642	Petromyzon_marinus
ENSCGRG00001006626	-	99	77.518	ENSPCIG00000025889	BYSL	97	76.941	Phascolarctos_cinereus
ENSCGRG00001006626	-	96	70.488	ENSPFOG00000000406	bysl	93	70.488	Poecilia_formosa
ENSCGRG00001006626	-	96	70.488	ENSPLAG00000013506	bysl	93	70.488	Poecilia_latipinna
ENSCGRG00001006626	-	96	70.732	ENSPMEG00000004461	bysl	93	70.732	Poecilia_mexicana
ENSCGRG00001006626	-	96	69.660	ENSPREG00000004437	bysl	93	69.660	Poecilia_reticulata
ENSCGRG00001006626	-	53	82.895	ENSPPYG00000017273	-	98	82.895	Pongo_abelii
ENSCGRG00001006626	-	81	92.174	ENSPCAG00000004575	BYSL	80	92.174	Procavia_capensis
ENSCGRG00001006626	-	100	84.668	ENSPCOG00000020727	-	100	84.211	Propithecus_coquereli
ENSCGRG00001006626	-	100	72.235	ENSPCOG00000003664	-	100	71.765	Propithecus_coquereli
ENSCGRG00001006626	-	100	83.982	ENSPVAG00000007606	BYSL	100	83.524	Pteropus_vampyrus
ENSCGRG00001006626	-	100	68.736	ENSPNYG00000007839	bysl	99	68.736	Pundamilia_nyererei
ENSCGRG00001006626	-	99	66.284	ENSPNAG00000010533	bysl	99	65.826	Pygocentrus_nattereri
ENSCGRG00001006626	-	100	86.239	ENSRNOG00000049121	Bysl	100	86.239	Rattus_norvegicus
ENSCGRG00001006626	-	100	84.668	ENSRBIG00000030183	BYSL	100	83.982	Rhinopithecus_bieti
ENSCGRG00001006626	-	100	84.439	ENSRROG00000007843	-	100	83.753	Rhinopithecus_roxellana
ENSCGRG00001006626	-	99	86.118	ENSRROG00000030276	-	98	85.613	Rhinopithecus_roxellana
ENSCGRG00001006626	-	98	32.903	YBR247C	ENP1	85	36.451	Saccharomyces_cerevisiae
ENSCGRG00001006626	-	100	84.211	ENSSBOG00000034517	BYSL	100	83.753	Saimiri_boliviensis_boliviensis
ENSCGRG00001006626	-	100	75.964	ENSSHAG00000003954	BYSL	100	75.964	Sarcophilus_harrisii
ENSCGRG00001006626	-	98	67.352	ENSSFOG00015016401	bysl	98	67.352	Scleropages_formosus
ENSCGRG00001006626	-	98	69.286	ENSSMAG00000000371	bysl	94	69.286	Scophthalmus_maximus
ENSCGRG00001006626	-	98	70.813	ENSSDUG00000009127	bysl	99	68.650	Seriola_dumerili
ENSCGRG00001006626	-	98	70.813	ENSSLDG00000022707	bysl	99	68.650	Seriola_lalandi_dorsalis
ENSCGRG00001006626	-	99	65.493	ENSSPUG00000007702	BYSL	96	64.789	Sphenodon_punctatus
ENSCGRG00001006626	-	98	70.192	ENSSPAG00000013378	bysl	94	70.192	Stegastes_partitus
ENSCGRG00001006626	-	100	80.549	ENSSSCG00000026752	BYSL	100	80.092	Sus_scrofa
ENSCGRG00001006626	-	100	68.119	ENSTRUG00000008963	bysl	98	77.333	Takifugu_rubripes
ENSCGRG00001006626	-	99	69.690	ENSTNIG00000014648	bysl	97	69.690	Tetraodon_nigroviridis
ENSCGRG00001006626	-	68	89.041	ENSTBEG00000009332	-	67	89.041	Tupaia_belangeri
ENSCGRG00001006626	-	100	76.201	ENSTTRG00000009429	BYSL	100	75.744	Tursiops_truncatus
ENSCGRG00001006626	-	100	84.439	ENSUAMG00000027838	BYSL	100	83.982	Ursus_americanus
ENSCGRG00001006626	-	100	78.060	ENSUMAG00000011988	BYSL	100	77.598	Ursus_maritimus
ENSCGRG00001006626	-	80	96.970	ENSVPAG00000005678	BYSL	81	96.970	Vicugna_pacos
ENSCGRG00001006626	-	100	83.066	ENSVVUG00000026680	BYSL	100	82.380	Vulpes_vulpes
ENSCGRG00001006626	-	100	67.512	ENSXETG00000011846	bysl	100	67.512	Xenopus_tropicalis
ENSCGRG00001006626	-	95	66.748	ENSXCOG00000003684	bysl	92	66.908	Xiphophorus_couchianus
ENSCGRG00001006626	-	95	70.098	ENSXMAG00000001060	bysl	92	70.244	Xiphophorus_maculatus